FFCP PHASE1:Mm9::chr17:48878055..48878083,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:48878055..48878083,- | |||
|description=CAGE_peak_at_chr17:48878055..48878083,- | |description=CAGE_peak_at_chr17:48878055..48878083,- | ||
|id=chr17:48878055..48878083,- | |id=chr17:48878055..48878083,- | ||
|ontology_enrichment_celltype=CL:0002563!2.27e-08!9;CL:0002251!2.27e-08!9 | |ontology_enrichment_celltype=CL:0002563!2.27e-08!9;CL:0002251!2.27e-08!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.50e-14,9;CL:0002251,5.50e-14,9;CL:0000239,9.28e-10,6;CL:0000677,9.28e-10,6;CL:0000584,9.28e-10,6;CL:0000075,3.24e-08,7;CL:0002076,1.61e-07,15;CL:0000066,4.95e-07,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.68e-24!43;UBERON:0005409!1.26e-19!59;UBERON:0004119!5.52e-17!130;UBERON:0000925!5.52e-17!130;UBERON:0006595!5.52e-17!130;UBERON:0001007!3.45e-16!128;UBERON:0001555!3.45e-16!128;UBERON:0007026!3.45e-16!128;UBERON:0004921!7.47e-15!126;UBERON:0004185!7.47e-15!126;UBERON:0000344!1.96e-13!15;UBERON:0001242!1.11e-11!13;UBERON:0000060!1.11e-11!13;UBERON:0001262!1.11e-11!13;UBERON:0004786!1.11e-11!13;UBERON:0004923!4.93e-09!24;UBERON:0002107!5.51e-09!22;UBERON:0007499!5.51e-09!22;UBERON:0006925!5.51e-09!22;UBERON:0009497!5.51e-09!22;UBERON:0000015!5.51e-09!22;UBERON:0002423!5.51e-09!22;UBERON:0006235!5.51e-09!22;UBERON:0008835!5.51e-09!22;UBERON:0003894!5.51e-09!22;UBERON:0004161!5.51e-09!22;UBERON:0008836!5.51e-09!22;UBERON:0003350!2.27e-08!9;UBERON:0004808!2.27e-08!9;UBERON:0001277!2.27e-08!9;UBERON:0009854!2.74e-08!23;UBERON:0009856!2.74e-08!23;UBERON:0002365!4.39e-07!25;UBERON:0002330!4.39e-07!25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.80e-36,31;UBERON:0005409,5.26e-24,47;UBERON:0000344,3.10e-23,15;UBERON:0001242,5.02e-20,13;UBERON:0001262,5.02e-20,13;UBERON:0004786,5.02e-20,13;UBERON:0001007,2.16e-17,116;UBERON:0001555,2.16e-17,116;UBERON:0007026,2.16e-17,116;UBERON:0004119,6.90e-17,118;UBERON:0000925,6.90e-17,118;UBERON:0006595,6.90e-17,118;UBERON:0004921,1.86e-15,114;UBERON:0004923,8.70e-15,24;UBERON:0003350,5.50e-14,9;UBERON:0004808,5.50e-14,9;UBERON:0001277,5.50e-14,9;UBERON:0000485,4.91e-11,11;UBERON:0002107,1.77e-07,22;UBERON:0007499,1.77e-07,22;UBERON:0006925,1.77e-07,22;UBERON:0009497,1.77e-07,22;UBERON:0000015,1.77e-07,22;UBERON:0002423,1.77e-07,22;UBERON:0006235,1.77e-07,22;UBERON:0008835,1.77e-07,22;UBERON:0003894,1.77e-07,22;UBERON:0004161,1.77e-07,22;UBERON:0008836,1.77e-07,22;UBERON:0003929,2.14e-07,55;UBERON:0002108,2.39e-07,4;UBERON:0009854,4.97e-07,23;UBERON:0009856,4.97e-07,23 | |||
|phase1_expression=0,8.02643437570531,9.09998478779072,5.14189159221611,3.00537437967808,6.21153306073992,4.43864017131499,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,9.5995453676044,7.11168771308227,5.7423196411502,4.73838195774982,7.11055067863434,6.27077284206034,7.56090389279792,5.98672378769323,0,0,0,9.82095507154334,4.48833542467929,5.71674197534634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383062014255563,0.307213066512487,0.131886287730194,0.182975287204819,0,0,0.56276261003168,0.916789486660861,0,0.142371680799103,0,0,0,0.289864488701678,0,0.679971333707751,0.539703191637817,0,0.448026887097336,0.561777680527007,0,0,0,0,0,0,0,0,0.760079596425296,0.505524445014783,1.37020655662872,0,0,0,0,0,0,0.117588707135705,0,6.17987419335935,0,0,0,0,0,0,0,0,6.64188343542338,0,0,0,0.299581278809645,0,0.125654352112864,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.1817767151575,3.96675849995316,0.213288250535234,0.696710015581316,1.54640953586512,3.83198696784351,4.22518283305254,7.03834816616469,3.32170343081158,7.24675400785648,7.79139147280835,6.56556357735798,8.18849165900304,3.59527763461689,6.26800344636613,4.18196673834171,0,0,0,0,0,0.210407459670956,0.189709611372772,0.295220295959204,0.31399745568275,0.123397163921801,0.592905254174298,0.667380422864376,1.17935397067922,1.34917267430912,1.42002084971952,0.964708639009667,1.52775511068852,2.30156909960649,1.94562272130042,5.21666685057355,1.43768206527355,4.09355042435354,3.74445207737473,1.51547326768267,1.25578189465339,2.41221760681684,0,0,0,0.169745085775188,0.234690248288502,0,0,0.585400943573396,0,0,0,0,0,0.433947175744535,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.209294227859,1.13163047853539,0.590603785761546,2.15204603560749,3.6179961043551,2.54473610634254,2.49548164869305,1.58018378967908,1.05418608574999,0,0.680879211507576,0,0,0,0,0,0,1.522324745573,0.704015124191131,0.63549621259146,0,0,0,0,0,0,6.70405924248657,0,0,0,0,0,0,0,0,0,0,0,0,0,0.86404272657441,0.627264888043406,0.218362563746178,0.674321731924103,1.07449492442937,0.523511883968059,1.16653475962614,0,1.69107881605257,0,0,0.194451188344048,0.387479470433193,0.844780627453891,0.58678619322877,0.13020438484395,0.104859344425711,0.966336483304024,0.864090018773596,0,0.202725215290164,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,1.9318959403219,0.375364950902364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0.183843508450014,0.222246727801615,0.206035057238894,0.320919209591815,0,1.01391719956096,0.754505365544305,0.561849044819294,0.832326981263301,0.402048282689293,0,0.347652977834566,0,1.23625770240992,0.883193520806384,0.342869252385415,0.177475806159338,0.238436189947321,0.581385666529314,0.658765662907314,0.25384382367503,0.914639864363863,0.526139422875686,0.271608227691724,0.561142271657738,0.355905054372522,0.492522411877817,0.818462086339379,0.309873682371932,0.385813221962283,0,0.701794825336225,0,0,0,0 | |phase1_expression=0,8.02643437570531,9.09998478779072,5.14189159221611,3.00537437967808,6.21153306073992,4.43864017131499,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,9.5995453676044,7.11168771308227,5.7423196411502,4.73838195774982,7.11055067863434,6.27077284206034,7.56090389279792,5.98672378769323,0,0,0,9.82095507154334,4.48833542467929,5.71674197534634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383062014255563,0.307213066512487,0.131886287730194,0.182975287204819,0,0,0.56276261003168,0.916789486660861,0,0.142371680799103,0,0,0,0.289864488701678,0,0.679971333707751,0.539703191637817,0,0.448026887097336,0.561777680527007,0,0,0,0,0,0,0,0,0.760079596425296,0.505524445014783,1.37020655662872,0,0,0,0,0,0,0.117588707135705,0,6.17987419335935,0,0,0,0,0,0,0,0,6.64188343542338,0,0,0,0.299581278809645,0,0.125654352112864,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.1817767151575,3.96675849995316,0.213288250535234,0.696710015581316,1.54640953586512,3.83198696784351,4.22518283305254,7.03834816616469,3.32170343081158,7.24675400785648,7.79139147280835,6.56556357735798,8.18849165900304,3.59527763461689,6.26800344636613,4.18196673834171,0,0,0,0,0,0.210407459670956,0.189709611372772,0.295220295959204,0.31399745568275,0.123397163921801,0.592905254174298,0.667380422864376,1.17935397067922,1.34917267430912,1.42002084971952,0.964708639009667,1.52775511068852,2.30156909960649,1.94562272130042,5.21666685057355,1.43768206527355,4.09355042435354,3.74445207737473,1.51547326768267,1.25578189465339,2.41221760681684,0,0,0,0.169745085775188,0.234690248288502,0,0,0.585400943573396,0,0,0,0,0,0.433947175744535,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.209294227859,1.13163047853539,0.590603785761546,2.15204603560749,3.6179961043551,2.54473610634254,2.49548164869305,1.58018378967908,1.05418608574999,0,0.680879211507576,0,0,0,0,0,0,1.522324745573,0.704015124191131,0.63549621259146,0,0,0,0,0,0,6.70405924248657,0,0,0,0,0,0,0,0,0,0,0,0,0,0.86404272657441,0.627264888043406,0.218362563746178,0.674321731924103,1.07449492442937,0.523511883968059,1.16653475962614,0,1.69107881605257,0,0,0.194451188344048,0.387479470433193,0.844780627453891,0.58678619322877,0.13020438484395,0.104859344425711,0.966336483304024,0.864090018773596,0,0.202725215290164,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,1.9318959403219,0.375364950902364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0.183843508450014,0.222246727801615,0.206035057238894,0.320919209591815,0,1.01391719956096,0.754505365544305,0.561849044819294,0.832326981263301,0.402048282689293,0,0.347652977834566,0,1.23625770240992,0.883193520806384,0.342869252385415,0.177475806159338,0.238436189947321,0.581385666529314,0.658765662907314,0.25384382367503,0.914639864363863,0.526139422875686,0.271608227691724,0.561142271657738,0.355905054372522,0.492522411877817,0.818462086339379,0.309873682371932,0.385813221962283,0,0.701794825336225,0,0,0,0 | ||
|short_description=p@chr17:48878055..48878083,- | |short_description=p@chr17:48878055..48878083,- | ||
}} | }} |
Latest revision as of 01:31, 5 August 2015
Short description: | p@chr17:48878055..48878083, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:48878055..48878083, - |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 5.50e-14 | 9 |
epithelial cell of alimentary canal | 5.50e-14 | 9 |
brush border epithelial cell | 9.28e-10 | 6 |
gut absorptive cell | 9.28e-10 | 6 |
enterocyte | 9.28e-10 | 6 |
columnar/cuboidal epithelial cell | 3.24e-08 | 7 |
endo-epithelial cell | 1.61e-07 | 15 |
epithelial cell | 4.95e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.80e-36 | 31 |
gastrointestinal system | 5.26e-24 | 47 |
mucosa | 3.10e-23 | 15 |
intestinal mucosa | 5.02e-20 | 13 |
wall of intestine | 5.02e-20 | 13 |
gastrointestinal system mucosa | 5.02e-20 | 13 |
digestive system | 2.16e-17 | 116 |
digestive tract | 2.16e-17 | 116 |
primitive gut | 2.16e-17 | 116 |
endoderm-derived structure | 6.90e-17 | 118 |
endoderm | 6.90e-17 | 118 |
presumptive endoderm | 6.90e-17 | 118 |
subdivision of digestive tract | 1.86e-15 | 114 |
organ component layer | 8.70e-15 | 24 |
epithelium of mucosa | 5.50e-14 | 9 |
gastrointestinal system epithelium | 5.50e-14 | 9 |
intestinal epithelium | 5.50e-14 | 9 |
simple columnar epithelium | 4.91e-11 | 11 |
liver | 1.77e-07 | 22 |
epithelial sac | 1.77e-07 | 22 |
digestive gland | 1.77e-07 | 22 |
epithelium of foregut-midgut junction | 1.77e-07 | 22 |
anatomical boundary | 1.77e-07 | 22 |
hepatobiliary system | 1.77e-07 | 22 |
foregut-midgut junction | 1.77e-07 | 22 |
hepatic diverticulum | 1.77e-07 | 22 |
liver primordium | 1.77e-07 | 22 |
septum transversum | 1.77e-07 | 22 |
liver bud | 1.77e-07 | 22 |
gut epithelium | 2.14e-07 | 55 |
small intestine | 2.39e-07 | 4 |
digestive tract diverticulum | 4.97e-07 | 23 |
sac | 4.97e-07 | 23 |