FFCP PHASE1:Hg19::chr12:132475623..132475637,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:132475623..132475637,+ | |||
|coexpression_cluster_id=C139 | |||
|description=CAGE_peak_at_chr12:132475623..132475637,+ | |description=CAGE_peak_at_chr12:132475623..132475637,+ | ||
|id=chr12:132475623..132475637,+ | |id=chr12:132475623..132475637,+ | ||
|ontology_enrichment_celltype=CL:0000064!1.85e-17!3;CL:0005012!1.85e-17!3;CL:0000067!1.85e-17!3;CL:0002304!1.85e-17!3;CL:0000128!1.30e-12!7;CL:0000126!1.30e-12!7;CL:0000127!1.30e-12!7;CL:0002453!1.30e-12!7;CL:0000243!4.33e-11!15;CL:0000125!4.33e-11!15;CL:0000030!4.33e-11!15;CL:0000339!4.33e-11!15;CL:0000095!7.39e-10!17;CL:0000123!7.39e-10!17;CL:0002319!5.63e-09!25;CL:0000133!1.25e-08!59;CL:0002603!3.55e-08!3;CL:0000221!7.09e-07!71;CL:0000075!9.10e-07!27 | |ontology_enrichment_celltype=CL:0000064!1.85e-17!3;CL:0005012!1.85e-17!3;CL:0000067!1.85e-17!3;CL:0002304!1.85e-17!3;CL:0000128!1.30e-12!7;CL:0000126!1.30e-12!7;CL:0000127!1.30e-12!7;CL:0002453!1.30e-12!7;CL:0000243!4.33e-11!15;CL:0000125!4.33e-11!15;CL:0000030!4.33e-11!15;CL:0000339!4.33e-11!15;CL:0000095!7.39e-10!17;CL:0000123!7.39e-10!17;CL:0002319!5.63e-09!25;CL:0000133!1.25e-08!59;CL:0002603!3.55e-08!3;CL:0000221!7.09e-07!71;CL:0000075!9.10e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0000064;1.53e-44;3!CL:0000067;1.53e-44;3!CL:0005012;1.53e-44;3!CL:0002304;1.53e-44;3!CL:0000075;8.94e-12;27!CL:0000306;1.22e-09;4!CL:0002222;1.22e-09;4!CL:0002224;1.22e-09;4!CL:0000243;8.55e-09;15!CL:0000125;8.55e-09;15!CL:0000095;5.73e-08;17!CL:0000710;1.38e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.91e-44,3;CL:0000067,1.91e-44,3;CL:0005012,1.91e-44,3;CL:0002304,1.91e-44,3;CL:0000075,9.28e-12,27;CL:0000306,1.22e-09,4;CL:0002222,1.22e-09,4;CL:0002224,1.22e-09,4;CL:0000133,3.21e-09,59;CL:0000243,8.55e-09,15;CL:0000125,8.55e-09,15;CL:0000030,8.55e-09,15;CL:0000339,8.55e-09,15;CL:0000095,5.73e-08,17;CL:0000123,5.73e-08,17;CL:0000221,1.09e-07,72;CL:0000710,1.42e-07,20 | |||
|ontology_enrichment_development_v019=UBERON:0010122;1.07e-17;2!UBERON:0006238;4.80e-13;10!CL:0000339;8.55e-09;15!CL:0000133;1.36e-07;59 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3093;4.80e-12;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,4.80e-12,11 | |||
|ontology_enrichment_uberon=UBERON:0000955!7.84e-35!69;UBERON:0006238!7.84e-35!69;UBERON:0003056!1.94e-33!61;UBERON:0001017!2.12e-31!82;UBERON:0002616!6.13e-31!59;UBERON:0000033!2.80e-30!123;UBERON:0005743!9.85e-30!86;UBERON:0002780!1.01e-28!41;UBERON:0001890!1.01e-28!41;UBERON:0006240!1.01e-28!41;UBERON:0000153!1.29e-28!129;UBERON:0007811!1.29e-28!129;UBERON:0002346!1.35e-28!90;UBERON:0001869!2.87e-28!32;UBERON:0003080!5.69e-28!42;UBERON:0003075!1.56e-27!86;UBERON:0007284!1.56e-27!86;UBERON:0002791!2.38e-27!33;UBERON:0000073!1.74e-26!94;UBERON:0001016!1.74e-26!94;UBERON:0002020!1.75e-26!34;UBERON:0003528!1.75e-26!34;UBERON:0001893!1.75e-26!34;UBERON:0001049!1.34e-25!57;UBERON:0005068!1.34e-25!57;UBERON:0006241!1.34e-25!57;UBERON:0007135!1.34e-25!57;UBERON:0000369!1.54e-22!4;UBERON:0002435!1.54e-22!4;UBERON:0000204!1.54e-22!4;UBERON:0010082!1.54e-22!4;UBERON:0000924!2.34e-21!173;UBERON:0006601!2.34e-21!173;UBERON:0004121!2.52e-20!169;UBERON:0000956!4.99e-18!25;UBERON:0000203!4.99e-18!25;UBERON:0001778!1.85e-17!3;UBERON:0001775!1.85e-17!3;UBERON:0005383!2.44e-17!3;UBERON:0005382!2.44e-17!3;UBERON:0002619!1.06e-16!22;UBERON:0002420!4.36e-15!9;UBERON:0007245!4.36e-15!9;UBERON:0010009!4.36e-15!9;UBERON:0010011!4.36e-15!9;UBERON:0000454!4.36e-15!9;UBERON:0001950!1.28e-14!20;UBERON:0000488!3.20e-13!4;UBERON:0009663!6.11e-13!7;UBERON:0007625!1.40e-12!11;UBERON:0002200!2.11e-12!11;UBERON:0006876!2.11e-12!11;UBERON:0001873!2.42e-12!2;UBERON:0010122!2.42e-12!2;UBERON:0002308!4.40e-10!9;UBERON:0000125!4.40e-10!9;UBERON:0000349!4.47e-10!5;UBERON:0001801!8.03e-10!14;UBERON:0002203!5.79e-09!6;UBERON:0001768!5.79e-09!6;UBERON:0007023!2.44e-08!115;UBERON:0000475!9.57e-08!365;UBERON:0000019!3.73e-07!19;UBERON:0000047!3.73e-07!19;UBERON:0004088!3.73e-07!19;UBERON:0003072!3.73e-07!19;UBERON:0003071!3.73e-07!19;UBERON:0004128!3.73e-07!19;UBERON:0001882!6.43e-07!1;UBERON:0005403!6.43e-07!1;UBERON:0000970!8.82e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0001778;1.53e-44;3!UBERON:0001775;1.53e-44;3!UBERON:0000488;9.88e-34;4!UBERON:0007625;1.17e-27;11!UBERON:0002203;6.78e-23;6!UBERON:0001768;6.78e-23;6!UBERON:0002200;6.78e-23;6!UBERON:0001801;6.21e-22;14!UBERON:0001873;1.07e-17;2!UBERON:0000019;2.16e-16;19!UBERON:0000047;2.16e-16;19!UBERON:0004088;2.16e-16;19!UBERON:0010230;2.16e-16;19!UBERON:0000970;1.29e-15;20!UBERON:0002104;6.53e-15;21!UBERON:0001456;6.53e-15;21!UBERON:0000020;1.10e-13;23!UBERON:0001032;3.78e-13;24!UBERON:0004456;3.78e-13;24!UBERON:0006876;5.42e-13;11!UBERON:0005383;2.89e-12;3!UBERON:0005382;2.89e-12;3!UBERON:0010371;1.13e-10;31!UBERON:0010077;1.22e-09;4!UBERON:0005389;1.22e-09;4!UBERON:0000484;1.22e-09;4!UBERON:0000965;1.22e-09;4!UBERON:0001803;1.22e-09;4!UBERON:0000369;1.57e-09;4!UBERON:0002435;1.57e-09;4!UBERON:0000204;1.57e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,1.91e-44,3;UBERON:0001775,1.91e-44,3;UBERON:0000488,1.17e-33,4;UBERON:0007625,1.28e-27,11;UBERON:0002203,7.58e-23,6;UBERON:0001768,7.58e-23,6;UBERON:0002200,7.58e-23,6;UBERON:0001801,6.67e-22,14;UBERON:0001873,9.07e-18,2;UBERON:0010122,9.07e-18,2;UBERON:0000019,1.36e-15,20;UBERON:0000047,1.36e-15,20;UBERON:0010312,1.36e-15,20;UBERON:0004088,1.36e-15,20;UBERON:0010230,1.36e-15,20;UBERON:0003072,1.36e-15,20;UBERON:0004128,1.36e-15,20;UBERON:0003071,1.36e-15,20;UBERON:0000970,6.85e-15,21;UBERON:0002104,6.85e-15,21;UBERON:0001456,2.99e-14,22;UBERON:0000020,3.94e-13,24;UBERON:0001032,3.94e-13,24;UBERON:0004456,3.94e-13,24;UBERON:0006876,5.76e-13,11;UBERON:0005383,2.59e-12,3;UBERON:0005382,2.59e-12,3;UBERON:0005085,2.44e-10,31;UBERON:0010077,1.22e-09,4;UBERON:0005389,1.22e-09,4;UBERON:0000484,1.22e-09,4;UBERON:0002546,1.22e-09,4;UBERON:0000965,1.22e-09,4;UBERON:0001803,1.22e-09,4;UBERON:0003073,1.22e-09,4;UBERON:0005426,1.22e-09,4;UBERON:0000369,1.44e-09,4;UBERON:0002435,1.44e-09,4;UBERON:0000204,1.44e-09,4;UBERON:0010082,1.44e-09,4;UBERON:0003056,4.43e-09,61;UBERON:0004121,3.21e-07,171;UBERON:0000924,3.21e-07,171;UBERON:0006601,3.21e-07,171;UBERON:0003075,6.64e-07,82;UBERON:0007284,6.64e-07,82;UBERON:0001444,8.57e-07,49 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61560529038394,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.45790524626576,0.443458794925128,1.05401742831751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454072282934794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.05756417412769,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,11.7608984877478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,1.4471572635049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468528891450678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189932387867636,0,0,0,0,0.144090417154106,0,0,0,0,0,0.815425236441684,1.255234155748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0.303747783290123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.642292250964595,0,0,0,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263091094251396,0,0,0,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0.517164979309476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61560529038394,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.45790524626576,0.443458794925128,1.05401742831751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454072282934794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.05756417412769,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,11.7608984877478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,1.4471572635049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468528891450678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189932387867636,0,0,0,0,0.144090417154106,0,0,0,0,0,0.815425236441684,1.255234155748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0.303747783290123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.642292250964595,0,0,0,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263091094251396,0,0,0,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0.517164979309476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:132475623..132475637,+ | |short_description=p@chr12:132475623..132475637,+ | ||
}} | }} |
Latest revision as of 06:49, 24 July 2015
Short description: | p@chr12:132475623..132475637, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:132475623..132475637, + |
Coexpression cluster: | C139_astrocytoma_skin_salivary_gall_serous_Mallassezderived_renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.91e-44 | 3 |
ciliated epithelial cell | 1.91e-44 | 3 |
multi-ciliated epithelial cell | 1.91e-44 | 3 |
non-pigmented ciliary epithelial cell | 1.91e-44 | 3 |
columnar/cuboidal epithelial cell | 9.28e-12 | 27 |
crystallin accumulating cell | 1.22e-09 | 4 |
vertebrate lens cell | 1.22e-09 | 4 |
lens epithelial cell | 1.22e-09 | 4 |
neurectodermal cell | 3.21e-09 | 59 |
glial cell (sensu Vertebrata) | 8.55e-09 | 15 |
glial cell | 8.55e-09 | 15 |
glioblast | 8.55e-09 | 15 |
glioblast (sensu Vertebrata) | 8.55e-09 | 15 |
neuron associated cell | 5.73e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 5.73e-08 | 17 |
ectodermal cell | 1.09e-07 | 72 |
neurecto-epithelial cell | 1.42e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 4.80e-12 | 11 |