FFCP PHASE1:Mm9::chr1:87546619..87546627,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20684 | |EntrezGene=20684 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=698 | |||
|TSSclassifier=NA | |||
|UniProt=F8WHM2,Q8C405,Q3U5P2,Q8BNW8,Q6NTA3 | |UniProt=F8WHM2,Q8C405,Q3U5P2,Q8BNW8,Q6NTA3 | ||
|association_with_transcript=0bp_to_ENSMUST00000027424,ENSMUST00000066427,ENSMUST00000097667,ENSMUST00000170314,NM_013673,uc007bud.1,uc007bue.1,uc007buf.1,uc007bug.1,uc007buh.1,uc011woc.1_5end | |association_with_transcript=0bp_to_ENSMUST00000027424,ENSMUST00000066427,ENSMUST00000097667,ENSMUST00000170314,NM_013673,uc007bud.1,uc007bue.1,uc007buf.1,uc007bug.1,uc007buh.1,uc011woc.1_5end | ||
|cluster_id=chr1:87546619..87546627,+ | |||
|description=CAGE_peak_3_at_Sp100_5end | |description=CAGE_peak_3_at_Sp100_5end | ||
|id=chr1:87546619..87546627,+ | |id=chr1:87546619..87546627,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.11e-08,12;CL:0000791,2.08e-08,9;CL:0000789,2.08e-08,9;CL:0002420,2.08e-08,9;CL:0002419,2.08e-08,9;CL:0000790,2.08e-08,9;CL:0002031,3.31e-08,25;CL:0000542,5.93e-08,13;CL:0000051,5.93e-08,13;CL:0000084,8.43e-07,11;CL:0000827,8.43e-07,11 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,3.82e-09,3;DOID:4045,3.82e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0004177!2.20e-10!29;UBERON:0002193!1.23e-09!48;UBERON:0003408!1.18e-08!24;UBERON:0002405!1.24e-08!70;UBERON:0002390!1.62e-08!45;UBERON:0003061!1.62e-08!45;UBERON:0005057!3.54e-08!51;UBERON:0002370!6.12e-08!23;UBERON:0000974!6.12e-08!23;UBERON:0004807!6.12e-08!23;UBERON:0005058!6.12e-08!23;UBERON:0003351!6.12e-08!23;UBERON:0009113!6.12e-08!23;UBERON:0003295!6.12e-08!23;UBERON:0009722!6.12e-08!23;UBERON:0005562!6.12e-08!23;UBERON:0007690!6.12e-08!23;UBERON:0001004!9.38e-08!42;UBERON:0006562!2.42e-07!24;UBERON:0001557!2.42e-07!24;UBERON:0001042!2.42e-07!24;UBERON:0008814!2.42e-07!24;UBERON:0009145!2.42e-07!24;UBERON:0005911!3.29e-07!69;UBERON:0000065!3.60e-07!41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003408,1.24e-09,24;UBERON:0002193,1.99e-08,48;UBERON:0002405,1.99e-08,48;UBERON:0002370,4.10e-08,23;UBERON:0000974,4.10e-08,23;UBERON:0004807,4.10e-08,23;UBERON:0005058,4.10e-08,23;UBERON:0003351,4.10e-08,23;UBERON:0009113,4.10e-08,23;UBERON:0003295,4.10e-08,23;UBERON:0009722,4.10e-08,23;UBERON:0005562,4.10e-08,23;UBERON:0007690,4.10e-08,23;UBERON:0006562,1.03e-07,24;UBERON:0001557,1.03e-07,24;UBERON:0001042,1.03e-07,24;UBERON:0008814,1.03e-07,24;UBERON:0009145,1.03e-07,24;UBERON:0002390,1.13e-07,45;UBERON:0003061,1.13e-07,45;UBERON:0004177,1.53e-07,29;UBERON:0005057,1.53e-07,29;UBERON:0000077,2.33e-07,35 | |||
|phase1_expression=0,0.348975407639361,0,0.30246421130683,0.500895729946347,0,0.700837921786577,2.84071311571468,0.563154888606667,0.468129052643987,0,0.159544317990673,7.70403284690426,5.24522414513984,0,0.607425802169478,0,3.94327706697797,4.11343300817216,1.27316895539409,0.17008658030214,0.0992909512008853,0,0.159992422793407,0.22940928106717,0,0,0.215471232685889,0.190023419456374,0,0,0,0,0,0,0,0,1.67412652294763,2.3440060335714,3.14114246384279,0,2.04913645487534,1.94204141212461,0,0.101376931219515,0,0,0,0,0,0,0,3.18786951509699,4.35217285206807,4.36921938885203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,3.47837386442013,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0.253359865475099,0,0.11418387971906,10.0985774622397,0.29688427812965,0,0,0,0,0.23517741427141,0,0,1.01219549843938,2.65383165584962,0,0.220841518460394,0,0,0,0,0.255457055208591,0.11981512450592,0,0.127070227073065,0.149790639404823,0,0,0,0,0,0,0,0.248813941220186,0.252722758433675,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0.32833492815819,0.324275238183423,0.146199987425332,1.75640092232841,0.402619256281115,0,0,0.991256348951394,0.793351699990633,0,0,0,0,0,0.190225626112559,0,0,0.251335208800269,0.198956472041151,0,0.898819408654221,0,0.199141273254367,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0.590440591918409,0.31399745568275,0.123397163921801,1.1858105083486,0,0,0,0,0.241177159752417,0,0.287696137450811,0.324270453550071,0,1.43768206527355,0.372140947668503,0,0,0.358794827043824,0.482443521363367,1.10851914099963,0,0,0,0,0.167506257441816,0.476087281772027,0.390267295715598,0,0.221464689648775,0,0.655453258862952,0.690739927463582,0.433947175744535,0,0.54390568381871,0.983528546038072,0.551873492609465,0,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0.321321316421807,0.567760340833074,0,0,0.824850614862677,0,0,0,0,0,0.307435147943927,0,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0.680879211507576,0,0,0,0,0,0,0,0,0,0.220528398054962,0.16488625294148,0,0.0603129249281559,0.119372344003136,0.164140899745061,1.1659233465194,0.18542530201051,1.19609616558497,0.206386867963223,0.370389054739423,0.376736914009382,0.410082683163076,0.228778173206523,0.169978429993855,0.279902904647316,0,0,0,0,0,0,0,0,0,0,0,2.4853572523477,0,0,0,0,0,0,0.117357238645754,0,0.104859344425711,0,0,2.21207784439725,0,0.102710957164827,0.25984164595559,0.537080087002444,0.79472541912506,1.20195449519969,0.738447635872886,1.21159739937777,0.990688486514998,1.00826185136841,1.55932609183604,1.34696578296461,1.28564592399726,0,0,0,0,0,0.375364950902364,0.549454872801795,0,1.00314420807073,0,0,0,0.171853182343688,0,0,0.675022500231806,0,0,0,0,0,0,0,0,0,0.44449345560323,0,0.320919209591815,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0.263069711437843,0,0,0.118635018124174,0,0,0,0,0,0,0,0.191288332068843,0.220591419119515,0.231867835620421 | |phase1_expression=0,0.348975407639361,0,0.30246421130683,0.500895729946347,0,0.700837921786577,2.84071311571468,0.563154888606667,0.468129052643987,0,0.159544317990673,7.70403284690426,5.24522414513984,0,0.607425802169478,0,3.94327706697797,4.11343300817216,1.27316895539409,0.17008658030214,0.0992909512008853,0,0.159992422793407,0.22940928106717,0,0,0.215471232685889,0.190023419456374,0,0,0,0,0,0,0,0,1.67412652294763,2.3440060335714,3.14114246384279,0,2.04913645487534,1.94204141212461,0,0.101376931219515,0,0,0,0,0,0,0,3.18786951509699,4.35217285206807,4.36921938885203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,3.47837386442013,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0.253359865475099,0,0.11418387971906,10.0985774622397,0.29688427812965,0,0,0,0,0.23517741427141,0,0,1.01219549843938,2.65383165584962,0,0.220841518460394,0,0,0,0,0.255457055208591,0.11981512450592,0,0.127070227073065,0.149790639404823,0,0,0,0,0,0,0,0.248813941220186,0.252722758433675,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0.32833492815819,0.324275238183423,0.146199987425332,1.75640092232841,0.402619256281115,0,0,0.991256348951394,0.793351699990633,0,0,0,0,0,0.190225626112559,0,0,0.251335208800269,0.198956472041151,0,0.898819408654221,0,0.199141273254367,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0.590440591918409,0.31399745568275,0.123397163921801,1.1858105083486,0,0,0,0,0.241177159752417,0,0.287696137450811,0.324270453550071,0,1.43768206527355,0.372140947668503,0,0,0.358794827043824,0.482443521363367,1.10851914099963,0,0,0,0,0.167506257441816,0.476087281772027,0.390267295715598,0,0.221464689648775,0,0.655453258862952,0.690739927463582,0.433947175744535,0,0.54390568381871,0.983528546038072,0.551873492609465,0,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0.321321316421807,0.567760340833074,0,0,0.824850614862677,0,0,0,0,0,0.307435147943927,0,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0.680879211507576,0,0,0,0,0,0,0,0,0,0.220528398054962,0.16488625294148,0,0.0603129249281559,0.119372344003136,0.164140899745061,1.1659233465194,0.18542530201051,1.19609616558497,0.206386867963223,0.370389054739423,0.376736914009382,0.410082683163076,0.228778173206523,0.169978429993855,0.279902904647316,0,0,0,0,0,0,0,0,0,0,0,2.4853572523477,0,0,0,0,0,0,0.117357238645754,0,0.104859344425711,0,0,2.21207784439725,0,0.102710957164827,0.25984164595559,0.537080087002444,0.79472541912506,1.20195449519969,0.738447635872886,1.21159739937777,0.990688486514998,1.00826185136841,1.55932609183604,1.34696578296461,1.28564592399726,0,0,0,0,0,0.375364950902364,0.549454872801795,0,1.00314420807073,0,0,0,0.171853182343688,0,0,0.675022500231806,0,0,0,0,0,0,0,0,0,0.44449345560323,0,0.320919209591815,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0.263069711437843,0,0,0.118635018124174,0,0,0,0,0,0,0,0.191288332068843,0.220591419119515,0.231867835620421 | ||
|short_description=p3@Sp100 | |short_description=p3@Sp100 | ||
}} | }} |
Latest revision as of 17:10, 1 October 2015
Short description: | p3@Sp100 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Sp100_5end |
Coexpression cluster: | MCL_coexpression_mm9:698 |
Association with transcript: | 0bp_to_ENSMUST00000027424, ENSMUST00000066427, ENSMUST00000097667, ENSMUST00000170314, NM_013673, uc007bud.1, uc007bue.1, uc007buf.1, uc007bug.1, uc007buh.1, uc011woc.1_5end |
EntrezGene: | Sp100 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.11e-08 | 12 |
mature alpha-beta T cell | 2.08e-08 | 9 |
alpha-beta T cell | 2.08e-08 | 9 |
immature T cell | 2.08e-08 | 9 |
mature T cell | 2.08e-08 | 9 |
immature alpha-beta T cell | 2.08e-08 | 9 |
hematopoietic lineage restricted progenitor cell | 3.31e-08 | 25 |
lymphocyte | 5.93e-08 | 13 |
common lymphoid progenitor | 5.93e-08 | 13 |
T cell | 8.43e-07 | 11 |
pro-T cell | 8.43e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
gland of gut | 1.24e-09 | 24 |
hemolymphoid system | 1.99e-08 | 48 |
immune system | 1.99e-08 | 48 |
thymus | 4.10e-08 | 23 |
neck | 4.10e-08 | 23 |
respiratory system epithelium | 4.10e-08 | 23 |
hemolymphoid system gland | 4.10e-08 | 23 |
pharyngeal epithelium | 4.10e-08 | 23 |
thymic region | 4.10e-08 | 23 |
pharyngeal gland | 4.10e-08 | 23 |
entire pharyngeal arch endoderm | 4.10e-08 | 23 |
thymus primordium | 4.10e-08 | 23 |
early pharyngeal endoderm | 4.10e-08 | 23 |
pharynx | 1.03e-07 | 24 |
upper respiratory tract | 1.03e-07 | 24 |
chordate pharynx | 1.03e-07 | 24 |
pharyngeal arch system | 1.03e-07 | 24 |
pharyngeal region of foregut | 1.03e-07 | 24 |
hematopoietic system | 1.13e-07 | 45 |
blood island | 1.13e-07 | 45 |
hemopoietic organ | 1.53e-07 | 29 |
immune organ | 1.53e-07 | 29 |
mixed endoderm/mesoderm-derived structure | 2.33e-07 | 35 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 3.82e-09 | 3 |
muscle cancer | 3.82e-09 | 3 |