FFCP PHASE1:Mm9::chr1:7058444..7058445,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=81 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:7058444..7058445,+ | |||
|description=CAGE_peak_at_chr1:7058444..7058445,+ | |description=CAGE_peak_at_chr1:7058444..7058445,+ | ||
|id=chr1:7058444..7058445,+ | |id=chr1:7058444..7058445,+ | ||
|ontology_enrichment_celltype=CL:0000084!7.62e-13!11;CL:0000827!7.62e-13!11;CL:0002031!1.12e-12!25;CL:0000791!7.96e-12!9;CL:0000789!7.96e-12!9;CL:0002420!7.96e-12!9;CL:0002419!7.96e-12!9;CL:0000790!7.96e-12!9;CL:0000838!1.82e-11!12;CL:0000219!7.58e-11!54;CL:0000624!1.18e-10!8;CL:0000063!1.73e-10!66;CL:0000542!2.64e-10!13;CL:0000051!2.64e-10!13;CL:0000548!6.77e-10!115;CL:0000004!6.77e-10!115;CL:0000255!6.77e-10!115;CL:0002371!2.71e-09!118;CL:0000144!1.00e-08!121;CL:0000012!1.00e-08!121;CL:0000738!1.07e-08!17;CL:0002087!1.07e-08!17;CL:0002320!1.12e-08!46;CL:0000134!1.12e-08!46;CL:0000988!1.43e-08!32;CL:0002032!1.43e-08!32;CL:0000037!1.43e-08!32;CL:0000566!1.43e-08!32;CL:0000837!1.43e-08!32;CL:0000893!1.73e-08!6;CL:0002489!1.73e-08!6;CL:0000898!1.73e-08!6;CL:0000809!1.73e-08!6;CL:0000810!1.73e-08!6;CL:0000895!1.73e-08!6;CL:0000808!1.73e-08!6;CL:0000894!1.73e-08!6;CL:0000806!1.73e-08!6;CL:0000807!1.73e-08!6;CL:0000805!1.73e-08!6;CL:0002425!1.73e-08!6;CL:0002436!1.73e-08!6;CL:0002427!1.73e-08!6;CL:0002428!1.73e-08!6;CL:0002429!1.73e-08!6;CL:0002433!1.73e-08!6;CL:0002431!1.73e-08!6;CL:0002432!1.73e-08!6;CL:0000553!1.45e-07!6;CL:0000556!1.45e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.24e-31,9;CL:0000789,1.24e-31,9;CL:0002420,1.24e-31,9;CL:0002419,1.24e-31,9;CL:0000790,1.24e-31,9;CL:0000624,3.45e-28,8;CL:0002031,7.24e-26,25;CL:0000084,1.29e-25,11;CL:0000827,1.29e-25,11;CL:0000838,2.33e-23,12;CL:0002320,7.58e-22,46;CL:0000134,7.58e-22,46;CL:0000893,7.85e-22,6;CL:0002489,7.85e-22,6;CL:0000898,7.85e-22,6;CL:0000809,7.85e-22,6;CL:0000810,7.85e-22,6;CL:0000895,7.85e-22,6;CL:0000808,7.85e-22,6;CL:0000894,7.85e-22,6;CL:0000806,7.85e-22,6;CL:0000807,7.85e-22,6;CL:0000805,7.85e-22,6;CL:0002425,7.85e-22,6;CL:0002436,7.85e-22,6;CL:0002427,7.85e-22,6;CL:0002428,7.85e-22,6;CL:0002429,7.85e-22,6;CL:0002433,7.85e-22,6;CL:0002431,7.85e-22,6;CL:0002432,7.85e-22,6;CL:0000542,1.90e-21,13;CL:0000051,1.90e-21,13;CL:0000219,2.46e-20,54;CL:0000738,7.04e-20,17;CL:0002087,7.04e-20,17;CL:0000988,1.32e-19,32;CL:0002032,1.32e-19,32;CL:0000037,1.32e-19,32;CL:0000837,1.32e-19,32;CL:0000034,7.74e-11,97;CL:0000723,1.63e-10,91;CL:0000048,1.63e-10,91;CL:0000553,1.00e-09,6;CL:0000556,1.00e-09,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.12e-08!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,7.58e-22,46;UBERON:0002390,2.55e-09,45;UBERON:0003061,2.55e-09,45;UBERON:0002193,1.35e-08,48;UBERON:0002405,1.35e-08,48;UBERON:0000072,2.66e-07,27;UBERON:0002370,7.01e-07,23;UBERON:0000974,7.01e-07,23;UBERON:0004807,7.01e-07,23;UBERON:0005058,7.01e-07,23;UBERON:0003351,7.01e-07,23;UBERON:0009113,7.01e-07,23;UBERON:0003295,7.01e-07,23;UBERON:0009722,7.01e-07,23;UBERON:0005562,7.01e-07,23;UBERON:0007690,7.01e-07,23 | |||
|phase1_expression=0.160148847104794,0,0,0.60492842261366,2.00358291978539,0,2.33612640595526,1.16210991097419,8.58811205125167,6.08567768437183,5.65019295144166,1.35612670292072,7.01922992717943,2.36035086531293,0.333109761815663,2.02475267389826,0.699561878128147,2.68142840554502,1.7824876368746,3.39511721438424,0.0850432901510698,0.0992909512008853,0.522399578277871,0.47997726838022,0.68822784320151,0.57423196411502,0,0,1.33016393619462,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0.777719596297134,1.53985063787899,0,0,6.5282592781021,4.36921938885203,0,0,1.03134418455488,0.202316460859598,0,0,0,0.889294796111139,0,0,0,0,0,0.207379224616955,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454357159999104,0.604572480854284,1.44932244350839,1.72084775396277,0,0,0,0,0,0,2.33807404142582,1.41335829804136,0,1.28326477414318,0,0,0.216491041011214,1.01343946190039,0,0,0,0,0,0.304465478312141,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0.414251545071004,0,0,0,0,0,0,0,0.233530684734339,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329397909448022,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0.140271639780637,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,2.71952841909355,0,0,0,0,0,0,0,0,0,0.238968797952552,0.222798674082394,0,0,0.292255857911312,0,0,0.141940085208269,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0.354680467284547,0,0,0,0,0,0,0,0,0.120625849856312,0.119372344003136,0,0,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0.129159823477731,0,0.352071715937262,0.13020438484395,0,0,0,0,0,0.102710957164827,0,0,0.198681354781265,0.120195449519969,0.295379054349154,0.100966449948148,0,0,0,0,0,0,0.221985953374065,0.358855426437903,1.00730769818447,0,0.187682475451182,0.183151624267265,0,0,0,0.460325236507177,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463537303779422,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0.237270036248348,0.197008964751127,0.818462086339379,0,0.192906610981141,0,0,0,0,0.220591419119515,0 | |phase1_expression=0.160148847104794,0,0,0.60492842261366,2.00358291978539,0,2.33612640595526,1.16210991097419,8.58811205125167,6.08567768437183,5.65019295144166,1.35612670292072,7.01922992717943,2.36035086531293,0.333109761815663,2.02475267389826,0.699561878128147,2.68142840554502,1.7824876368746,3.39511721438424,0.0850432901510698,0.0992909512008853,0.522399578277871,0.47997726838022,0.68822784320151,0.57423196411502,0,0,1.33016393619462,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0.777719596297134,1.53985063787899,0,0,6.5282592781021,4.36921938885203,0,0,1.03134418455488,0.202316460859598,0,0,0,0.889294796111139,0,0,0,0,0,0.207379224616955,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454357159999104,0.604572480854284,1.44932244350839,1.72084775396277,0,0,0,0,0,0,2.33807404142582,1.41335829804136,0,1.28326477414318,0,0,0.216491041011214,1.01343946190039,0,0,0,0,0,0.304465478312141,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0.414251545071004,0,0,0,0,0,0,0,0.233530684734339,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329397909448022,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0.140271639780637,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,2.71952841909355,0,0,0,0,0,0,0,0,0,0.238968797952552,0.222798674082394,0,0,0.292255857911312,0,0,0.141940085208269,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0.354680467284547,0,0,0,0,0,0,0,0,0.120625849856312,0.119372344003136,0,0,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0.129159823477731,0,0.352071715937262,0.13020438484395,0,0,0,0,0,0.102710957164827,0,0,0.198681354781265,0.120195449519969,0.295379054349154,0.100966449948148,0,0,0,0,0,0,0.221985953374065,0.358855426437903,1.00730769818447,0,0.187682475451182,0.183151624267265,0,0,0,0.460325236507177,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463537303779422,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0.237270036248348,0.197008964751127,0.818462086339379,0,0.192906610981141,0,0,0,0,0.220591419119515,0 | ||
|short_description=p@chr1:7058444..7058445,+ | |short_description=p@chr1:7058444..7058445,+ | ||
}} | }} |
Latest revision as of 22:28, 5 August 2015
Short description: | p@chr1:7058444..7058445, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:7058444..7058445, + |
Coexpression cluster: | MCL_coexpression_mm9:81 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 7.58e-22 | 46 |
hematopoietic system | 2.55e-09 | 45 |
blood island | 2.55e-09 | 45 |
hemolymphoid system | 1.35e-08 | 48 |
immune system | 1.35e-08 | 48 |
segment of respiratory tract | 2.66e-07 | 27 |
thymus | 7.01e-07 | 23 |
neck | 7.01e-07 | 23 |
respiratory system epithelium | 7.01e-07 | 23 |
hemolymphoid system gland | 7.01e-07 | 23 |
pharyngeal epithelium | 7.01e-07 | 23 |
thymic region | 7.01e-07 | 23 |
pharyngeal gland | 7.01e-07 | 23 |
entire pharyngeal arch endoderm | 7.01e-07 | 23 |
thymus primordium | 7.01e-07 | 23 |
early pharyngeal endoderm | 7.01e-07 | 23 |