FFCP PHASE1:Hg19::chr12:109901382..109901388,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:109901382..109901388,+ | |||
|description=CAGE_peak_at_chr12:109901382..109901388,+ | |description=CAGE_peak_at_chr12:109901382..109901388,+ | ||
|id=chr12:109901382..109901388,+ | |id=chr12:109901382..109901388,+ | ||
|ontology_enrichment_celltype=CL:0002540!1.40e-07!6;CL:0000346!2.33e-07!3;CL:1000428!2.33e-07!3;CL:0002564!5.82e-07!3 | |ontology_enrichment_celltype=CL:0002540!1.40e-07!6;CL:0000346!2.33e-07!3;CL:1000428!2.33e-07!3;CL:0002564!5.82e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002540;3.97e-14;6!CL:0002092;7.36e-09;10!CL:0002620;2.03e-08;23!CL:0000135;4.84e-08;3!CL:0000388;4.84e-08;3!CL:0000346;6.78e-08;3!CL:1000428;6.78e-08;3!CL:0000746;6.78e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002540,3.97e-14,6;CL:0002092,7.36e-09,10;CL:0002620,2.03e-08,23;CL:0000135,4.52e-08,3;CL:0000388,4.52e-08,3;CL:0000346,6.34e-08,3;CL:1000428,6.34e-08,3;CL:0000746,6.78e-08,3;CL:0000513,6.78e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000513;6.78e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000412!2.33e-07!3;UBERON:0001992!2.33e-07!3;UBERON:0002242!5.82e-07!3;UBERON:0003068!5.82e-07!3;UBERON:0002328!5.82e-07!3;UBERON:0004880!5.82e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;4.84e-08;3!UBERON:0000043;4.84e-08;3!UBERON:0007845;4.84e-08;3!UBERON:0000412;6.78e-08;3!UBERON:0001992;6.78e-08;3!UBERON:0002371;1.57e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,4.14e-08,41;UBERON:0007846,4.52e-08,3;UBERON:0000043,4.52e-08,3;UBERON:0007845,4.52e-08,3;UBERON:0000412,6.34e-08,3;UBERON:0001992,6.34e-08,3;UBERON:0002199,2.94e-07,46;UBERON:0002416,2.94e-07,46 | |||
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| ||
|short_description=p@chr12:109901382..109901388,+ | |short_description=p@chr12:109901382..109901388,+ | ||
}} | }} |
Latest revision as of 04:45, 24 July 2015
Short description: | p@chr12:109901382..109901388, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:109901382..109901388, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of the bone marrow | 3.97e-14 | 6 |
bone marrow cell | 7.36e-09 | 10 |
skin fibroblast | 2.03e-08 | 23 |
fibrocyte | 4.52e-08 | 3 |
tendon cell | 4.52e-08 | 3 |
hair follicle dermal papilla cell | 6.34e-08 | 3 |
stem cell of epidermis | 6.34e-08 | 3 |
cardiac muscle cell | 6.78e-08 | 3 |
cardiac muscle myoblast | 6.78e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
skin of body | 4.14e-08 | 41 |
dense regular connective tissue | 4.52e-08 | 3 |
tendon | 4.52e-08 | 3 |
regular connective tissue | 4.52e-08 | 3 |
dermal papilla | 6.34e-08 | 3 |
papillary layer of dermis | 6.34e-08 | 3 |
integument | 2.94e-07 | 46 |
integumental system | 2.94e-07 | 46 |