FFCP PHASE1:Hg19::chr12:109554364..109554380,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=32 | |EntrezGene=32 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=85 | |HGNC=85 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-19bp_to_ENST00000338432,uc001tob.2_5end | |association_with_transcript=-19bp_to_ENST00000338432,uc001tob.2_5end | ||
|cluster_id=chr12:109554364..109554380,+ | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_9_at_ACACB_5end | |description=CAGE_peak_9_at_ACACB_5end | ||
|id=chr12:109554364..109554380,+ | |id=chr12:109554364..109554380,+ | ||
|ontology_enrichment_celltype=CL:0000136!1.40e-13!15;CL:0002615!1.11e-08!3 | |ontology_enrichment_celltype=CL:0000136!1.40e-13!15;CL:0002615!1.11e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000136;3.11e-15;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,4.11e-13,15 | |||
|ontology_enrichment_development_v019=UBERON:0005062;8.85e-14;4!UBERON:0007284;8.85e-14;4!UBERON:0003104;2.99e-08;31!UBERON:0000358;1.75e-07;1!UBERON:0004140;2.10e-07;1!UBERON:0006603;2.33e-07;65!UBERON:0010226;2.37e-07;1!UBERON:0010227;2.67e-07;1!UBERON:0005754;4.70e-07;1!UBERON:0004874;4.70e-07;1 | |||
|ontology_enrichment_disease=DOID:114!2.81e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:114;2.15e-13;2!DOID:178;1.64e-07;1!DOID:326;1.64e-07;1!DOID:3978;1.64e-07;1!DOID:3394;1.64e-07;1!DOID:5844;1.64e-07;1!DOID:1287;4.19e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,2.15e-13,2;DOID:178,1.65e-07,1;DOID:326,1.65e-07,1;DOID:3978,1.65e-07,1;DOID:3394,1.65e-07,1;DOID:5844,1.65e-07,1;DOID:1287,4.19e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.34e-30!115;UBERON:0003296!7.62e-11!4;UBERON:0010133!7.62e-11!4;UBERON:0003978!1.35e-09!3;UBERON:0009751!1.35e-09!3;UBERON:0000946!1.35e-09!3;UBERON:0002523!1.35e-09!3;UBERON:0005983!1.35e-09!3;UBERON:0002165!1.35e-09!3;UBERON:0002062!1.35e-09!3;UBERON:0007280!1.35e-09!3;UBERON:0004151!1.51e-09!3;UBERON:0006947!6.01e-09!3;UBERON:0004054!6.01e-09!3;UBERON:0003103!1.03e-08!69;UBERON:0007100!2.40e-07!27;UBERON:0001630!4.34e-07!2;UBERON:0005090!4.34e-07!2;UBERON:0002133!7.90e-07!2;UBERON:0002081!8.13e-07!2;UBERON:0005904!8.56e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;3.45e-18;3!UBERON:0000946;3.45e-18;3!UBERON:0004151;4.35e-18;3!UBERON:0007100;6.97e-18;25!UBERON:0005090;4.98e-13;2!UBERON:0001630;4.98e-13;2!UBERON:0002133;1.76e-12;2!UBERON:0002081;1.87e-12;2!UBERON:0000948;3.69e-09;22!UBERON:0001723;1.00e-08;3!UBERON:0001033;1.00e-08;3!UBERON:0006947;1.96e-08;3!UBERON:0004054;1.96e-08;3!UBERON:0001389;1.55e-07;1!UBERON:0000026;1.55e-07;1!UBERON:0008784;1.55e-07;1!UBERON:0006058;1.55e-07;1!UBERON:0003663;1.55e-07;1!UBERON:0004256;1.55e-07;1!UBERON:0004708;1.55e-07;1!UBERON:0002101;1.55e-07;1!UBERON:0004709;1.55e-07;1!UBERON:0002529;1.55e-07;1!UBERON:0010538;1.55e-07;1!UBERON:0003661;1.55e-07;1!UBERON:0010890;1.55e-07;1!UBERON:0002471;1.55e-07;1!UBERON:0001383;1.55e-07;1!UBERON:0010758;1.55e-07;1!UBERON:0010707;1.55e-07;1!UBERON:0000978;1.55e-07;1!UBERON:0002103;1.55e-07;1!UBERON:0001665;1.55e-07;1!UBERON:0003823;1.55e-07;1!UBERON:0000154;1.55e-07;1!UBERON:0010709;1.55e-07;1!UBERON:0002146;1.97e-07;1!UBERON:0005623;1.97e-07;1!UBERON:0002084;2.37e-07;1!UBERON:0002082;2.37e-07;1!UBERON:0002135;2.52e-07;1!UBERON:0002079;2.67e-07;1!UBERON:0002426;3.60e-07;1!UBERON:0003831;3.60e-07;1!UBERON:0003898;3.60e-07;1!UBERON:0004830;3.60e-07;1!UBERON:0003830;3.60e-07;1!UBERON:0005175;3.60e-07;1!UBERON:0001774;3.60e-07;1!UBERON:0001103;3.60e-07;1!UBERON:0007029;4.70e-07;1!UBERON:0000989;4.70e-07;1!UBERON:0000998;4.70e-07;1!UBERON:0008811;4.70e-07;1!UBERON:0006868;4.70e-07;1!UBERON:0001000;7.95e-07;1!UBERON:0002134;7.95e-07;1!UBERON:0005208;7.95e-07;1!UBERON:0004145;7.95e-07;1!UBERON:0005946;7.95e-07;1!UBERON:0005352;7.95e-07;1!UBERON:0005965;7.95e-07;1!UBERON:0002078;7.95e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,3.55e-18,3;UBERON:0009751,3.55e-18,3;UBERON:0000946,3.55e-18,3;UBERON:0002523,3.55e-18,3;UBERON:0005983,3.55e-18,3;UBERON:0002165,3.55e-18,3;UBERON:0002062,3.55e-18,3;UBERON:0007280,3.55e-18,3;UBERON:0004151,4.49e-18,3;UBERON:0007100,1.93e-16,27;UBERON:0007023,3.96e-16,114;UBERON:0005090,5.29e-13,2;UBERON:0001630,5.29e-13,2;UBERON:0002133,1.81e-12,2;UBERON:0002081,1.92e-12,2;UBERON:0010227,1.92e-12,2;UBERON:0003103,5.45e-12,68;UBERON:0001723,1.06e-08,3;UBERON:0001033,1.06e-08,3;UBERON:0010056,1.06e-08,3;UBERON:0006947,1.81e-08,3;UBERON:0004054,1.81e-08,3;UBERON:0000948,2.42e-08,24;UBERON:0005498,2.42e-08,24;UBERON:0004140,2.42e-08,24;UBERON:0009881,2.42e-08,24;UBERON:0004141,2.42e-08,24;UBERON:0003084,2.42e-08,24;UBERON:0007005,2.42e-08,24;UBERON:0004139,2.42e-08,24;UBERON:0004291,2.42e-08,24;UBERON:0004797,4.54e-08,7;UBERON:0005418,1.55e-07,1;UBERON:0001389,1.55e-07,1;UBERON:0000026,1.55e-07,1;UBERON:0008784,1.55e-07,1;UBERON:0006058,1.55e-07,1;UBERON:0003663,1.55e-07,1;UBERON:0004256,1.55e-07,1;UBERON:0004708,1.55e-07,1;UBERON:0002101,1.55e-07,1;UBERON:0004709,1.55e-07,1;UBERON:0002529,1.55e-07,1;UBERON:0010538,1.55e-07,1;UBERON:0003661,1.55e-07,1;UBERON:0010890,1.55e-07,1;UBERON:0002471,1.55e-07,1;UBERON:0001383,1.55e-07,1;UBERON:0004357,1.55e-07,1;UBERON:0004347,1.55e-07,1;UBERON:0005420,1.55e-07,1;UBERON:0005732,1.55e-07,1;UBERON:0010758,1.55e-07,1;UBERON:0010707,1.55e-07,1;UBERON:0000978,1.55e-07,1;UBERON:0002103,1.55e-07,1;UBERON:0001665,1.55e-07,1;UBERON:0003823,1.55e-07,1;UBERON:0000154,1.55e-07,1;UBERON:0010709,1.55e-07,1;UBERON:0005733,1.55e-07,1;UBERON:0005730,1.55e-07,1;UBERON:0002146,1.98e-07,1;UBERON:0005623,1.98e-07,1;UBERON:0002084,2.37e-07,1;UBERON:0002082,2.37e-07,1;UBERON:0010226,2.37e-07,1;UBERON:0002135,2.52e-07,1;UBERON:0002079,2.67e-07,1;UBERON:0002426,3.82e-07,1;UBERON:0003831,3.82e-07,1;UBERON:0003898,3.82e-07,1;UBERON:0004830,3.82e-07,1;UBERON:0003830,3.82e-07,1;UBERON:0005175,3.82e-07,1;UBERON:0001774,3.82e-07,1;UBERON:0001103,3.82e-07,1;UBERON:0010084,3.82e-07,1;UBERON:0000989,4.06e-07,1;UBERON:0008811,4.06e-07,1;UBERON:0006258,4.06e-07,1;UBERON:0005876,4.06e-07,1;UBERON:0004874,4.06e-07,1;UBERON:0007029,4.31e-07,1;UBERON:0000998,4.85e-07,1;UBERON:0006868,4.85e-07,1;UBERON:0001000,6.88e-07,1;UBERON:0005352,6.88e-07,1;UBERON:0002134,8.18e-07,1;UBERON:0005208,8.18e-07,1;UBERON:0005946,8.18e-07,1;UBERON:0005965,8.18e-07,1;UBERON:0002078,8.18e-07,1 | |||
|phase1_expression=0,2.78330681058278,0.704772020479856,1.0007329835313,0.446961094427288,0,0,0,0.783556884599516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.8347699159725,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503865495708552,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,1.44999915086959,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179515288819544,0.54323685961004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0.067401132980677,3.21031058919516,0,0,0,0,1.57833761139756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.290967049465258,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.7298608534347,16.0412296808179,1.43574604915363,26.9566650673638,65.2423593167588,13.6134589039542,14.8475474195665,0,0,0.157566364614447,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.524545881349981,0,0,0,7.86164859010704,12.5797474369432,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0,0,0,0,0,0,0,1.63205341010842,2.0055191521816,3.36980134439808,3.60659893780785,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,1.56302802246618,0,0,0,0.0675375846183947,0,0,0,0,0,2.97726707033577,0,0,1.60710550763486,0.336283722218824,0.606965604236632,0.227662191351298,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0.357382720883282,0,0.116241425368125,0,0,0,0,0,0,0,0,2.54032230114557,0,0,0,0,0,0,28.4868688362674,17.9659911998432,1.1598144313382,2.91426595835484,0,0,0,0,0,0,0.154348316215889,0,0,0.245148321753905,0,0,0,0.4226557275834,0,0,0.193373663920732,0,0,0,0,0,0.917458566809082,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,4.69114760182158,0.476128862927481,0,0,0,0.509177266225319,0.202117188958219,5.22520194952707,2.05339980651169,0.202056159043763,0.0717222053926763,1.99596213927608,0,0,0,0,21.1176848163109,0,0,0,1.00636896795513,0 | |phase1_expression=0,2.78330681058278,0.704772020479856,1.0007329835313,0.446961094427288,0,0,0,0.783556884599516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.8347699159725,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503865495708552,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,1.44999915086959,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179515288819544,0.54323685961004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0.067401132980677,3.21031058919516,0,0,0,0,1.57833761139756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.290967049465258,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.7298608534347,16.0412296808179,1.43574604915363,26.9566650673638,65.2423593167588,13.6134589039542,14.8475474195665,0,0,0.157566364614447,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.524545881349981,0,0,0,7.86164859010704,12.5797474369432,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0,0,0,0,0,0,0,1.63205341010842,2.0055191521816,3.36980134439808,3.60659893780785,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,1.56302802246618,0,0,0,0.0675375846183947,0,0,0,0,0,2.97726707033577,0,0,1.60710550763486,0.336283722218824,0.606965604236632,0.227662191351298,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0.357382720883282,0,0.116241425368125,0,0,0,0,0,0,0,0,2.54032230114557,0,0,0,0,0,0,28.4868688362674,17.9659911998432,1.1598144313382,2.91426595835484,0,0,0,0,0,0,0.154348316215889,0,0,0.245148321753905,0,0,0,0.4226557275834,0,0,0.193373663920732,0,0,0,0,0,0.917458566809082,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,4.69114760182158,0.476128862927481,0,0,0,0.509177266225319,0.202117188958219,5.22520194952707,2.05339980651169,0.202056159043763,0.0717222053926763,1.99596213927608,0,0,0,0,21.1176848163109,0,0,0,1.00636896795513,0 | ||
|short_description=p9@ACACB | |short_description=p9@ACACB | ||
}} | }} |
Latest revision as of 06:22, 16 September 2015
Short description: | p9@ACACB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_ACACB_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | -19bp_to_ENST00000338432, uc001tob.2_5end |
EntrezGene: | ACACB |
HGNC: | 85 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 4.11e-13 | 15 |
Ontology term | p-value | n |
---|---|---|
heart disease | 2.15e-13 | 2 |
vascular disease | 1.65e-07 | 1 |
ischemia | 1.65e-07 | 1 |
extrinsic cardiomyopathy | 1.65e-07 | 1 |
myocardial ischemia | 1.65e-07 | 1 |