FFCP PHASE1:Mm9::chr1:192803140..192803151,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=226841 | |EntrezGene=226841 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=108 | |||
|TSSclassifier=NA | |||
|UniProt=Q8C5G2 | |UniProt=Q8C5G2 | ||
|association_with_transcript=23bp_to_ENSMUST00000166139,NR_027352,uc007ebs.2_5end | |association_with_transcript=23bp_to_ENSMUST00000166139,NR_027352,uc007ebs.2_5end | ||
|cluster_id=chr1:192803140..192803151,- | |||
|description=CAGE_peak_4_at_Vash2_5end | |description=CAGE_peak_4_at_Vash2_5end | ||
|id=chr1:192803140..192803151,- | |id=chr1:192803140..192803151,- | ||
|ontology_enrichment_celltype=CL:0000540!1.60e-11!33;CL:0000047!1.60e-11!33;CL:0000031!1.60e-11!33;CL:0000404!1.60e-11!33;CL:0000393!1.10e-09!39;CL:0000211!1.10e-09!39;CL:0000117!5.31e-09!23;CL:0000337!5.31e-09!23;CL:0000221!2.51e-07!44;CL:0000133!2.51e-07!44;CL:0002319!4.83e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.82e-15,23;CL:0000337,9.82e-15,23;CL:0002609,2.07e-12,6;CL:0000540,1.97e-10,33;CL:0000047,1.97e-10,33;CL:0000031,1.97e-10,33;CL:0000404,1.97e-10,33;CL:0000393,3.18e-08,39;CL:0000211,3.18e-08,39;CL:0000120,4.14e-07,3;CL:0002319,4.17e-07,43;CL:0002608,5.17e-07,3;CL:0002613,5.65e-07,3;CL:0000221,7.34e-07,44;CL:0000133,7.34e-07,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!9.11e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.28e-07,34;UBERON:0000369,6.85e-07,5;UBERON:0002435,6.85e-07,5;UBERON:0000204,6.85e-07,5;UBERON:0010082,6.85e-07,5 | |||
|phase1_expression=1.12104192973356,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0.573066879877513,0,3.43937983461316,3.70293685490423,2.53532561402472,0,0,0,0,0,0.599200221036809,0,2.17748185847803,4.72520784160917,2.94454945891935,0.856952953211411,0.662605622854841,2.44981598429908,3.73797336971122,2.75765635983006,0,0.255374676170375,0.307213066512487,3.42904348098504,3.47653045689157,2.08365348222704,0,0,0.15279824777681,0.883885756421003,1.56608848879013,2.98239113320481,0,0,0,0,0,0,0,0,0,0.170430322578058,0,0,0.704217098883403,1.28326477414318,0,0,0,0,0,0,0,0,0.693941307064543,0.608930956624282,0.230615497256059,0,0.23517741427141,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0.149790639404823,0.457500602818626,2.26177833803156,0.173824320192276,0.255715457330331,0.20778804455956,0,1.12023300235348,0.373220911830279,0.252722758433675,0,1.04096354370163,0.919608417733892,1.0803727788321,1.05493372485001,0.544291993210623,0.896796041993948,0.468508622798644,0,2.37124792226126,1.89106080167819,1.75951124163949,3.06874025398605,0.278047249225598,0.348252166522167,0,0.59710280045548,0,0,0,1.65700618028402,1.17263029990548,0.720248245844059,1.42046841351126,0.787056926989615,0.925602677324269,1.16266972375204,1.3413670069981,0.467061369468678,0.493679549740441,0.164167464079095,0,0,0,0,0,1.74937841044784,0,0,1.91959425481711,0.696710015581316,0.515469845288373,0,0.22237804384487,0,0,0,0,0,0.19496408711912,0,0,0.199141273254367,1.13800740571849,0.799739588268102,0,1.01825663922657,0.387904974335251,0.561086559122548,0.0632365371242573,0,0,0,0,0.500535317148282,0.393117990226406,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0.757965647081939,0.162964976442026,0.509235257325564,0.234690248288502,0,0.238043640886014,0,0,0.44292937929755,0.318909537314974,0,0,0,0,0,0,0,0.160550589987792,0.234423373184406,0.163934945376675,0,0.94652465824877,0.390438744296638,0.646270193198397,0.955875191810208,0.222798674082394,0.849229592366497,0.809621403349789,0.292255857911312,0.395287777946524,0,0.141940085208269,1.06839362200353,0.325773918707152,0,0,0.242780636154981,0.302323556964751,0,0.590603785761546,0,0.258428293168221,0.727067458955011,0.712994756769443,0,0,0,0,1.8006109403131,0.776152102696527,0.428674070063185,0.354680467284547,0.356737635204141,0.493647061806363,0,0.469343416127421,0,0,0,0.161464426695906,0.241251699712623,0.238744688006273,0,0,0,0,1.44470807574256,0.185194527369712,0,0,0,0.169978429993855,0,0,0,1.58167996790568,0.406638934253697,0.216010681643603,0.209088296014469,0.218362563746178,0,0.0826534557253359,0,0,0,0,1.19613236835183,0.165458490457098,0.194451188344048,0.516639293910924,0.506868376472335,0.234714477291508,0.13020438484395,0.104859344425711,0,1.15212002503146,0,0.810900861160657,0.924398614483445,0.129920822977795,0.179026695667481,0,0,0.147689527174577,0,0,0.100826185136841,0,0,0.116876902181569,0,0,0.269141569828427,0.167884616364078,0,0,0.36630324853453,0,0.501572104035363,0,0.460325236507177,0,0,0,0.755393897389701,0.675022500231806,0,0,0,1.764384908931,1.19707462020309,1.36586884603307,1.94485373654635,0.838452650511929,1.2869045591501,0.222246727801615,1.03017528619447,0.320919209591815,1.01078884705519,1.52087579934144,0.943131706930381,0.749132059759059,0.512201219238954,0.402048282689293,0.476293691283074,0.579421629724277,0.38581844092741,0.412085900803307,0.441596760403192,1.02860775715625,0.532427418478012,0.238436189947321,0.436039249896986,0.470546902076653,0.507687647350059,0.914639864363863,0.526139422875686,0.679020569229309,0.561142271657738,0.949080144993393,0.197008964751127,0,0.77468420592983,0.964533054905707,1.49886346762768,0.467863216890817,1.07435527024149,1.53030665655075,0,0.231867835620421 | |phase1_expression=1.12104192973356,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0.573066879877513,0,3.43937983461316,3.70293685490423,2.53532561402472,0,0,0,0,0,0.599200221036809,0,2.17748185847803,4.72520784160917,2.94454945891935,0.856952953211411,0.662605622854841,2.44981598429908,3.73797336971122,2.75765635983006,0,0.255374676170375,0.307213066512487,3.42904348098504,3.47653045689157,2.08365348222704,0,0,0.15279824777681,0.883885756421003,1.56608848879013,2.98239113320481,0,0,0,0,0,0,0,0,0,0.170430322578058,0,0,0.704217098883403,1.28326477414318,0,0,0,0,0,0,0,0,0.693941307064543,0.608930956624282,0.230615497256059,0,0.23517741427141,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0.149790639404823,0.457500602818626,2.26177833803156,0.173824320192276,0.255715457330331,0.20778804455956,0,1.12023300235348,0.373220911830279,0.252722758433675,0,1.04096354370163,0.919608417733892,1.0803727788321,1.05493372485001,0.544291993210623,0.896796041993948,0.468508622798644,0,2.37124792226126,1.89106080167819,1.75951124163949,3.06874025398605,0.278047249225598,0.348252166522167,0,0.59710280045548,0,0,0,1.65700618028402,1.17263029990548,0.720248245844059,1.42046841351126,0.787056926989615,0.925602677324269,1.16266972375204,1.3413670069981,0.467061369468678,0.493679549740441,0.164167464079095,0,0,0,0,0,1.74937841044784,0,0,1.91959425481711,0.696710015581316,0.515469845288373,0,0.22237804384487,0,0,0,0,0,0.19496408711912,0,0,0.199141273254367,1.13800740571849,0.799739588268102,0,1.01825663922657,0.387904974335251,0.561086559122548,0.0632365371242573,0,0,0,0,0.500535317148282,0.393117990226406,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0.757965647081939,0.162964976442026,0.509235257325564,0.234690248288502,0,0.238043640886014,0,0,0.44292937929755,0.318909537314974,0,0,0,0,0,0,0,0.160550589987792,0.234423373184406,0.163934945376675,0,0.94652465824877,0.390438744296638,0.646270193198397,0.955875191810208,0.222798674082394,0.849229592366497,0.809621403349789,0.292255857911312,0.395287777946524,0,0.141940085208269,1.06839362200353,0.325773918707152,0,0,0.242780636154981,0.302323556964751,0,0.590603785761546,0,0.258428293168221,0.727067458955011,0.712994756769443,0,0,0,0,1.8006109403131,0.776152102696527,0.428674070063185,0.354680467284547,0.356737635204141,0.493647061806363,0,0.469343416127421,0,0,0,0.161464426695906,0.241251699712623,0.238744688006273,0,0,0,0,1.44470807574256,0.185194527369712,0,0,0,0.169978429993855,0,0,0,1.58167996790568,0.406638934253697,0.216010681643603,0.209088296014469,0.218362563746178,0,0.0826534557253359,0,0,0,0,1.19613236835183,0.165458490457098,0.194451188344048,0.516639293910924,0.506868376472335,0.234714477291508,0.13020438484395,0.104859344425711,0,1.15212002503146,0,0.810900861160657,0.924398614483445,0.129920822977795,0.179026695667481,0,0,0.147689527174577,0,0,0.100826185136841,0,0,0.116876902181569,0,0,0.269141569828427,0.167884616364078,0,0,0.36630324853453,0,0.501572104035363,0,0.460325236507177,0,0,0,0.755393897389701,0.675022500231806,0,0,0,1.764384908931,1.19707462020309,1.36586884603307,1.94485373654635,0.838452650511929,1.2869045591501,0.222246727801615,1.03017528619447,0.320919209591815,1.01078884705519,1.52087579934144,0.943131706930381,0.749132059759059,0.512201219238954,0.402048282689293,0.476293691283074,0.579421629724277,0.38581844092741,0.412085900803307,0.441596760403192,1.02860775715625,0.532427418478012,0.238436189947321,0.436039249896986,0.470546902076653,0.507687647350059,0.914639864363863,0.526139422875686,0.679020569229309,0.561142271657738,0.949080144993393,0.197008964751127,0,0.77468420592983,0.964533054905707,1.49886346762768,0.467863216890817,1.07435527024149,1.53030665655075,0,0.231867835620421 | ||
|short_description=p4@Vash2 | |short_description=p4@Vash2 | ||
}} | }} |
Latest revision as of 23:57, 26 September 2015
Short description: | p4@Vash2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Vash2_5end |
Coexpression cluster: | MCL_coexpression_mm9:108 |
Association with transcript: | 23bp_to_ENSMUST00000166139, NR_027352, uc007ebs.2_5end |
EntrezGene: | Vash2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.82e-15 | 23 |
neuroblast (sensu Vertebrata) | 9.82e-15 | 23 |
neuron of cerebral cortex | 2.07e-12 | 6 |
neuron | 1.97e-10 | 33 |
neuronal stem cell | 1.97e-10 | 33 |
neuroblast | 1.97e-10 | 33 |
electrically signaling cell | 1.97e-10 | 33 |
electrically responsive cell | 3.18e-08 | 39 |
electrically active cell | 3.18e-08 | 39 |
granule cell | 4.14e-07 | 3 |
neural cell | 4.17e-07 | 43 |
hippocampal neuron | 5.17e-07 | 3 |
striatum neuron | 5.65e-07 | 3 |
ectodermal cell | 7.34e-07 | 44 |
neurectodermal cell | 7.34e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
gray matter | 3.28e-07 | 34 |
corpus striatum | 6.85e-07 | 5 |
striatum | 6.85e-07 | 5 |
ventral part of telencephalon | 6.85e-07 | 5 |
future corpus striatum | 6.85e-07 | 5 |