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FFCP PHASE1:Mm9::chr16:11984249..11984263,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=72555
|EntrezGene=72555
|HGNC=
|HGNC=
|MCL_coexpression_id=251
|TSSclassifier=NA
|UniProt=E9QN38,Q9CZN4
|UniProt=E9QN38,Q9CZN4
|association_with_transcript=43bp_to_NM_001174086,NM_028277,uc007yfr.1,uc007yfs.2,uc007yft.2_5end
|association_with_transcript=43bp_to_NM_001174086,NM_028277,uc007yfr.1,uc007yfs.2,uc007yft.2_5end
|cluster_id=chr16:11984249..11984263,+
|description=CAGE_peak_4_at_Shisa9_5end
|description=CAGE_peak_4_at_Shisa9_5end
|id=chr16:11984249..11984263,+
|id=chr16:11984249..11984263,+
|ontology_enrichment_celltype=CL:0000117!3.33e-16!23;CL:0000337!3.33e-16!23;CL:0000540!2.32e-12!33;CL:0000047!2.32e-12!33;CL:0000031!2.32e-12!33;CL:0000404!2.32e-12!33;CL:0002319!3.61e-09!43;CL:0000393!1.06e-08!39;CL:0000211!1.06e-08!39;CL:0000221!1.08e-08!44;CL:0000133!1.08e-08!44
|ontology_enrichment_celltype=CL:0000117!3.33e-16!23;CL:0000337!3.33e-16!23;CL:0000540!2.32e-12!33;CL:0000047!2.32e-12!33;CL:0000031!2.32e-12!33;CL:0000404!2.32e-12!33;CL:0002319!3.61e-09!43;CL:0000393!1.06e-08!39;CL:0000211!1.06e-08!39;CL:0000221!1.08e-08!44;CL:0000133!1.08e-08!44
|ontology_enrichment_celltype_v019_2=CL:0000117,7.39e-29,23;CL:0000337,7.39e-29,23;CL:0000540,2.27e-18,33;CL:0000047,2.27e-18,33;CL:0000031,2.27e-18,33;CL:0000404,2.27e-18,33;CL:0002319,1.27e-15,43;CL:0000221,3.95e-15,44;CL:0000133,3.95e-15,44;CL:0000393,1.11e-14,39;CL:0000211,1.11e-14,39;CL:0002321,3.54e-08,70;CL:0002610,5.55e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.67e-26!73;UBERON:0005743!1.67e-26!73;UBERON:0000073!4.64e-25!75;UBERON:0001016!4.64e-25!75;UBERON:0001049!3.51e-23!52;UBERON:0005068!3.51e-23!52;UBERON:0006241!3.51e-23!52;UBERON:0007135!3.51e-23!52;UBERON:0000955!1.23e-22!50;UBERON:0006238!1.23e-22!50;UBERON:0002616!9.33e-22!49;UBERON:0002020!7.83e-21!34;UBERON:0002346!5.30e-20!71;UBERON:0003075!5.30e-20!71;UBERON:0007284!5.30e-20!71;UBERON:0000033!2.60e-19!63;UBERON:0003080!8.59e-19!40;UBERON:0004121!1.07e-18!102;UBERON:0000924!1.07e-18!102;UBERON:0006601!1.07e-18!102;UBERON:0002780!5.73e-18!39;UBERON:0001890!5.73e-18!39;UBERON:0006240!5.73e-18!39;UBERON:0002791!1.57e-17!29;UBERON:0003528!1.57e-17!29;UBERON:0001893!1.57e-17!29;UBERON:0003056!2.05e-17!49;UBERON:0000956!1.37e-11!21;UBERON:0001869!1.37e-11!21;UBERON:0000203!1.37e-11!21;UBERON:0007811!6.66e-11!86;UBERON:0000153!2.87e-09!94;UBERON:0002619!3.23e-09!17;UBERON:0002021!1.41e-08!10;UBERON:0000411!1.41e-08!10;UBERON:0001950!1.41e-08!10;UBERON:0002420!2.62e-07!8;UBERON:0007245!2.62e-07!8;UBERON:0010009!2.62e-07!8;UBERON:0010011!2.62e-07!8;UBERON:0000454!2.62e-07!8
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.26e-43,54;UBERON:0001017,1.39e-43,73;UBERON:0001016,3.94e-42,75;UBERON:0002020,4.68e-41,34;UBERON:0001049,1.86e-39,52;UBERON:0005068,1.86e-39,52;UBERON:0006241,1.86e-39,52;UBERON:0007135,1.86e-39,52;UBERON:0003528,9.37e-34,29;UBERON:0002791,9.37e-34,29;UBERON:0001893,9.37e-34,29;UBERON:0000955,5.27e-33,47;UBERON:0006238,5.27e-33,47;UBERON:0004121,1.77e-32,95;UBERON:0000924,1.77e-32,95;UBERON:0006601,1.77e-32,95;UBERON:0003080,4.03e-32,40;UBERON:0002346,5.48e-32,64;UBERON:0003075,5.48e-32,64;UBERON:0007284,5.48e-32,64;UBERON:0002616,2.96e-31,46;UBERON:0002780,2.14e-30,39;UBERON:0001890,2.14e-30,39;UBERON:0006240,2.14e-30,39;UBERON:0010371,7.82e-27,73;UBERON:0003056,1.69e-26,49;UBERON:0000956,8.68e-21,21;UBERON:0001869,8.68e-21,21;UBERON:0000203,8.68e-21,21;UBERON:0010314,2.82e-19,92;UBERON:0002021,3.85e-17,10;UBERON:0000411,3.85e-17,10;UBERON:0001950,3.85e-17,10;UBERON:0002619,1.21e-15,17;UBERON:0002420,2.51e-14,8;UBERON:0007245,2.51e-14,8;UBERON:0010009,2.51e-14,8;UBERON:0010011,2.51e-14,8;UBERON:0000454,2.51e-14,8;UBERON:0000025,1.04e-13,114;UBERON:0004111,3.46e-12,122;UBERON:0011216,3.15e-10,194;UBERON:0000369,6.31e-10,5;UBERON:0002435,6.31e-10,5;UBERON:0000204,6.31e-10,5;UBERON:0010082,6.31e-10,5;UBERON:0002240,2.73e-09,6;UBERON:0005174,2.73e-09,6;UBERON:0001137,2.73e-09,6;UBERON:0001948,3.19e-08,5;UBERON:0002315,3.19e-08,5;UBERON:0002950,8.90e-08,4;UBERON:0001891,8.90e-08,4;UBERON:0009616,8.90e-08,4;UBERON:0010286,8.90e-08,4;UBERON:0003076,1.37e-07,12;UBERON:0003057,1.37e-07,12;UBERON:0004684,5.55e-07,3;UBERON:0002275,5.55e-07,3
|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,2.42779753031517,4.23192783417626,1.90149421051854,0,0,0,0,0,1.49800055259202,1.53687322128622,1.65903379693564,1.08004750665353,1.47227472945967,2.28520787523043,2.65042249141936,0.979926393719632,0.766763768145891,2.75765635983006,5.50579404996943,6.89511625660014,6.45147439676223,5.40733779693795,5.48925861614458,3.12548022334056,2.51264699101243,5.06486349028512,3.20876320331301,3.83017161115768,2.42031857358475,2.05039390407831,0,0,1.44932244350839,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0.173485326766136,0,0,0.150722640552623,0.352766121407114,0.125666591329675,0,0,0,0,0,0,0,0.585561594023094,0.628340120440365,0,0,0,0,6.14141621559773,17.3850229071078,4.27224797183739,5.73620256634512,5.62574006126727,5.40248915854856,9.08551073179443,0.305518091550949,0,0.758168275301024,0.420883711772948,0,0,0.180062129805349,0,0.136072998302656,0.12811372028485,0.374806898238915,1.03481348295606,0,0,0.175951124163949,0,0.278047249225598,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.99550902271842,2.77842453424068,0,0,0,0,0.257734922644187,0.403367049246685,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0,0,0.189667900953082,0.228497025219458,0,0,0.193952487167626,0,0.126473074248515,0,0.156998727841375,0,0,0,0.393117990226406,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.977789858652155,0.509235257325564,0,0.502518772325447,0.238043640886014,0.195133647857799,0.157635144106191,0.221464689648775,0,0,0,0,1.50791283939272,0,0,0,3.05046120976805,3.04750385139728,0,0,0,0.390438744296638,0,0,0.222798674082394,0.283076530788832,0,0,0.790575555893047,14.1381379225595,0.141940085208269,0.35613120733451,0.325773918707152,0.164970122972535,0,0,0,0.188605079755898,0,0.614870295887855,0.258428293168221,0,0,0,0,0,0.340439605753788,0,0,0,0.354680467284547,1.60531935841864,0.987294123612726,0.304464949114599,0,0,0.220528398054962,0,0,0.0603129249281559,0,0,0,1.29797711407357,0,0.206386867963223,0,0,0,0,0.169978429993855,0,0,0,0.632671987162271,0,0.108005340821801,0,0,0,0.165306911450672,0,0,0,0,0,0,0.194451188344048,0.258319646955462,0.168956125490778,0.117357238645754,0,0,0,0,0,0.202725215290164,0,0,0.179026695667481,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0.386379188064381,0,0.183151624267265,0,0,6.7770221114048,3.68260189205742,5.72895513439397,2.749650917499,4.11049511862385,3.7769694869485,3.37511250115903,4.05289082901798,3.17199686288943,3.62432218226274,0,0.399024873401031,0.170733605754134,0.486213434136588,0,0.183843508450014,0.666740183404846,1.03017528619447,0.320919209591815,0.252697211763798,0.50695859978048,0.754505365544305,0.655490552289177,0.960377286073039,0.689225627467359,0.476293691283074,0.695305955669133,0.578727661391115,0.824171801606613,0.883193520806384,0.342869252385415,0.354951612318675,0.715308569841963,0.872078499793971,0.564656282491984,0.338458431566706,0.548783918618318,0.526139422875686,0.814824683075171,0.561142271657738,0.949080144993393,0.492522411877817,0,0,0.385813221962283,1.49886346762768,0.467863216890817,0.214871054048298,0.382576664137687,0,0
|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,2.42779753031517,4.23192783417626,1.90149421051854,0,0,0,0,0,1.49800055259202,1.53687322128622,1.65903379693564,1.08004750665353,1.47227472945967,2.28520787523043,2.65042249141936,0.979926393719632,0.766763768145891,2.75765635983006,5.50579404996943,6.89511625660014,6.45147439676223,5.40733779693795,5.48925861614458,3.12548022334056,2.51264699101243,5.06486349028512,3.20876320331301,3.83017161115768,2.42031857358475,2.05039390407831,0,0,1.44932244350839,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0.173485326766136,0,0,0.150722640552623,0.352766121407114,0.125666591329675,0,0,0,0,0,0,0,0.585561594023094,0.628340120440365,0,0,0,0,6.14141621559773,17.3850229071078,4.27224797183739,5.73620256634512,5.62574006126727,5.40248915854856,9.08551073179443,0.305518091550949,0,0.758168275301024,0.420883711772948,0,0,0.180062129805349,0,0.136072998302656,0.12811372028485,0.374806898238915,1.03481348295606,0,0,0.175951124163949,0,0.278047249225598,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.99550902271842,2.77842453424068,0,0,0,0,0.257734922644187,0.403367049246685,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0,0,0.189667900953082,0.228497025219458,0,0,0.193952487167626,0,0.126473074248515,0,0.156998727841375,0,0,0,0.393117990226406,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.977789858652155,0.509235257325564,0,0.502518772325447,0.238043640886014,0.195133647857799,0.157635144106191,0.221464689648775,0,0,0,0,1.50791283939272,0,0,0,3.05046120976805,3.04750385139728,0,0,0,0.390438744296638,0,0,0.222798674082394,0.283076530788832,0,0,0.790575555893047,14.1381379225595,0.141940085208269,0.35613120733451,0.325773918707152,0.164970122972535,0,0,0,0.188605079755898,0,0.614870295887855,0.258428293168221,0,0,0,0,0,0.340439605753788,0,0,0,0.354680467284547,1.60531935841864,0.987294123612726,0.304464949114599,0,0,0.220528398054962,0,0,0.0603129249281559,0,0,0,1.29797711407357,0,0.206386867963223,0,0,0,0,0.169978429993855,0,0,0,0.632671987162271,0,0.108005340821801,0,0,0,0.165306911450672,0,0,0,0,0,0,0.194451188344048,0.258319646955462,0.168956125490778,0.117357238645754,0,0,0,0,0,0.202725215290164,0,0,0.179026695667481,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0.386379188064381,0,0.183151624267265,0,0,6.7770221114048,3.68260189205742,5.72895513439397,2.749650917499,4.11049511862385,3.7769694869485,3.37511250115903,4.05289082901798,3.17199686288943,3.62432218226274,0,0.399024873401031,0.170733605754134,0.486213434136588,0,0.183843508450014,0.666740183404846,1.03017528619447,0.320919209591815,0.252697211763798,0.50695859978048,0.754505365544305,0.655490552289177,0.960377286073039,0.689225627467359,0.476293691283074,0.695305955669133,0.578727661391115,0.824171801606613,0.883193520806384,0.342869252385415,0.354951612318675,0.715308569841963,0.872078499793971,0.564656282491984,0.338458431566706,0.548783918618318,0.526139422875686,0.814824683075171,0.561142271657738,0.949080144993393,0.492522411877817,0,0,0.385813221962283,1.49886346762768,0.467863216890817,0.214871054048298,0.382576664137687,0,0
|short_description=p4@Shisa9
|short_description=p4@Shisa9
}}
}}

Latest revision as of 15:20, 1 October 2015

Short description:p4@Shisa9
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Shisa9_5end
Coexpression cluster:MCL_coexpression_mm9:251
Association with transcript: 43bp_to_NM_001174086, NM_028277, uc007yfr.1, uc007yfs.2, uc007yft.2_5end
EntrezGene:Shisa9
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Shisa9

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.53
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.43
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.66
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.65
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.77
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.90
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.41
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.49
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.51
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.06
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.21
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.83
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.05
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A46.14
corpus striatum, adult.CNhs10487.19-21D817.39
corpus striatum, neonate N00.CNhs11226.630-43F14.27
cortex, adult.CNhs10473.12-14D55.74
cortex, neonate N30.CNhs11107.1392-42F25.63
diencephalon, adult.CNhs10482.20-12F25.40
diencephalon, neonate N30.CNhs11201.1388-42B29.09
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E84.00
hippocampus, neonate N00.CNhs11228.627-43G12.78
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C23.05
medulla oblongata, neonate N30.CNhs11200.1396-42A33.05
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I914.14
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F61.61
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.30
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.78
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.73
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.75
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.05
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.26e-4354
central nervous system1.39e-4373
nervous system3.94e-4275
gray matter4.68e-4134
neural tube1.86e-3952
neural rod1.86e-3952
future spinal cord1.86e-3952
neural keel1.86e-3952
brain grey matter9.37e-3429
regional part of telencephalon9.37e-3429
telencephalon9.37e-3429
brain5.27e-3347
future brain5.27e-3347
ectoderm-derived structure1.77e-3295
ectoderm1.77e-3295
presumptive ectoderm1.77e-3295
anterior neural tube4.03e-3240
neurectoderm5.48e-3264
neural plate5.48e-3264
presumptive neural plate5.48e-3264
regional part of brain2.96e-3146
regional part of forebrain2.14e-3039
forebrain2.14e-3039
future forebrain2.14e-3039
ecto-epithelium7.82e-2773
pre-chordal neural plate1.69e-2649
cerebral cortex8.68e-2121
cerebral hemisphere8.68e-2121
pallium8.68e-2121
structure with developmental contribution from neural crest2.82e-1992
occipital lobe3.85e-1710
visual cortex3.85e-1710
neocortex3.85e-1710
regional part of cerebral cortex1.21e-1517
basal ganglion2.51e-148
nuclear complex of neuraxis2.51e-148
aggregate regional part of brain2.51e-148
collection of basal ganglia2.51e-148
cerebral subcortex2.51e-148
tube1.04e-13114
anatomical conduit3.46e-12122
organ system subdivision3.15e-10194
corpus striatum6.31e-105
striatum6.31e-105
ventral part of telencephalon6.31e-105
future corpus striatum6.31e-105
spinal cord2.73e-096
dorsal region element2.73e-096
dorsum2.73e-096
regional part of spinal cord3.19e-085
gray matter of spinal cord3.19e-085
regional part of midbrain8.90e-084
midbrain8.90e-084
presumptive midbrain8.90e-084
midbrain neural tube8.90e-084
posterior neural tube1.37e-0712
chordal neural plate1.37e-0712
raphe nuclei5.55e-073
reticular formation5.55e-073
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