FFCP PHASE1:Mm9::chr15:78681575..78681587,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=410 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:78681575..78681587,- | |||
|description=CAGE_peak_at_chr15:78681575..78681587,- | |description=CAGE_peak_at_chr15:78681575..78681587,- | ||
|id=chr15:78681575..78681587,- | |id=chr15:78681575..78681587,- | ||
|ontology_enrichment_celltype=CL:0002563!3.60e-15!9;CL:0002251!3.60e-15!9;CL:0000239!2.52e-09!6;CL:0000677!2.52e-09!6;CL:0000212!2.52e-09!6;CL:0000584!2.52e-09!6;CL:0002076!1.76e-08!15;CL:0000075!6.34e-08!7;CL:0002250!1.43e-07!3;CL:0000066!3.34e-07!25 | |ontology_enrichment_celltype=CL:0002563!3.60e-15!9;CL:0002251!3.60e-15!9;CL:0000239!2.52e-09!6;CL:0000677!2.52e-09!6;CL:0000212!2.52e-09!6;CL:0000584!2.52e-09!6;CL:0002076!1.76e-08!15;CL:0000075!6.34e-08!7;CL:0002250!1.43e-07!3;CL:0000066!3.34e-07!25 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,8.45e-26,9;CL:0002251,8.45e-26,9;CL:0002076,3.07e-15,15;CL:0002250,4.47e-15,3;CL:0000066,1.26e-14,25;CL:0000239,2.54e-13,6;CL:0000677,2.54e-13,6;CL:0000584,2.54e-13,6;CL:0000075,1.90e-11,7;CL:0000223,2.89e-11,20;CL:0000682,1.92e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!7.66e-31!43;UBERON:0005409!2.42e-28!59;UBERON:0000344!1.84e-27!15;UBERON:0001242!5.49e-23!13;UBERON:0000060!5.49e-23!13;UBERON:0001262!5.49e-23!13;UBERON:0004786!5.49e-23!13;UBERON:0004923!5.03e-18!24;UBERON:0003350!3.60e-15!9;UBERON:0004808!3.60e-15!9;UBERON:0001277!3.60e-15!9;UBERON:0000485!3.99e-12!11;UBERON:0001007!4.51e-11!128;UBERON:0001555!4.51e-11!128;UBERON:0007026!4.51e-11!128;UBERON:0004119!8.81e-11!130;UBERON:0000925!8.81e-11!130;UBERON:0006595!8.81e-11!130;UBERON:0004921!2.73e-09!126;UBERON:0004185!2.73e-09!126;UBERON:0000331!7.83e-08!3;UBERON:0002116!7.83e-08!3;UBERON:0001204!7.83e-08!3;UBERON:0001168!7.83e-08!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,6.33e-46,15;UBERON:0001242,2.64e-36,13;UBERON:0001262,2.64e-36,13;UBERON:0004786,2.64e-36,13;UBERON:0004923,4.22e-28,24;UBERON:0003350,8.45e-26,9;UBERON:0004808,8.45e-26,9;UBERON:0001277,8.45e-26,9;UBERON:0000160,1.00e-24,31;UBERON:0000485,5.27e-21,11;UBERON:0005409,1.74e-18,47;UBERON:0000331,1.16e-15,3;UBERON:0002116,1.16e-15,3;UBERON:0001204,1.16e-15,3;UBERON:0001168,1.16e-15,3;UBERON:0002108,6.89e-12,4;UBERON:0001962,1.22e-11,2;UBERON:0001961,1.22e-11,2;UBERON:0001744,1.22e-11,2;UBERON:0001007,1.03e-08,116;UBERON:0001555,1.03e-08,116;UBERON:0007026,1.03e-08,116;UBERON:0004119,1.59e-08,118;UBERON:0000925,1.59e-08,118;UBERON:0006595,1.59e-08,118;UBERON:0002465,4.86e-08,3 | |||
|phase1_expression=0,0.348975407639361,1.81999695755814,2.11724947914781,0,1.17515490338323,4.67225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.1996590257033,5.50582274561208,1.14846392823004,0,4.95583835177545,5.32065574477847,1.51218077855958,2.66076612786366,0,0,0,1.73310971850765,2.49351968037739,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0.340860645156116,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,2.55457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.528901133327089,0,0,0.902072229254653,0.403367049246685,1.11189021922435,0.380451252225118,0.949058123089023,0.494096864172033,0.251335208800269,0.397912944082302,0.779856348476481,1.79763881730844,0.432276099749388,0.796565093017469,0,0,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,6.68269432610579,0,0.406638934253697,0,0,0,0,0.165306911450672,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.348975407639361,1.81999695755814,2.11724947914781,0,1.17515490338323,4.67225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.1996590257033,5.50582274561208,1.14846392823004,0,4.95583835177545,5.32065574477847,1.51218077855958,2.66076612786366,0,0,0,1.73310971850765,2.49351968037739,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0.340860645156116,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,2.55457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.528901133327089,0,0,0.902072229254653,0.403367049246685,1.11189021922435,0.380451252225118,0.949058123089023,0.494096864172033,0.251335208800269,0.397912944082302,0.779856348476481,1.79763881730844,0.432276099749388,0.796565093017469,0,0,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,6.68269432610579,0,0.406638934253697,0,0,0,0,0.165306911450672,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr15:78681575..78681587,- | |short_description=p@chr15:78681575..78681587,- | ||
}} | }} |
Latest revision as of 14:48, 5 August 2015
Short description: | p@chr15:78681575..78681587, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:78681575..78681587, - |
Coexpression cluster: | MCL_coexpression_mm9:410 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 8.45e-26 | 9 |
epithelial cell of alimentary canal | 8.45e-26 | 9 |
endo-epithelial cell | 3.07e-15 | 15 |
intestinal crypt stem cell | 4.47e-15 | 3 |
epithelial cell | 1.26e-14 | 25 |
brush border epithelial cell | 2.54e-13 | 6 |
gut absorptive cell | 2.54e-13 | 6 |
enterocyte | 2.54e-13 | 6 |
columnar/cuboidal epithelial cell | 1.90e-11 | 7 |
endodermal cell | 2.89e-11 | 20 |
M cell of gut | 1.92e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mucosa | 6.33e-46 | 15 |
intestinal mucosa | 2.64e-36 | 13 |
wall of intestine | 2.64e-36 | 13 |
gastrointestinal system mucosa | 2.64e-36 | 13 |
organ component layer | 4.22e-28 | 24 |
epithelium of mucosa | 8.45e-26 | 9 |
gastrointestinal system epithelium | 8.45e-26 | 9 |
intestinal epithelium | 8.45e-26 | 9 |
intestine | 1.00e-24 | 31 |
simple columnar epithelium | 5.27e-21 | 11 |
gastrointestinal system | 1.74e-18 | 47 |
ileal mucosa | 1.16e-15 | 3 |
ileum | 1.16e-15 | 3 |
mucosa of small intestine | 1.16e-15 | 3 |
wall of small intestine | 1.16e-15 | 3 |
small intestine | 6.89e-12 | 4 |
gut-associated lymphoid tissue | 1.22e-11 | 2 |
mucosa-associated lymphoid tissue | 1.22e-11 | 2 |
lymphoid tissue | 1.22e-11 | 2 |
digestive system | 1.03e-08 | 116 |
digestive tract | 1.03e-08 | 116 |
primitive gut | 1.03e-08 | 116 |
endoderm-derived structure | 1.59e-08 | 118 |
endoderm | 1.59e-08 | 118 |
presumptive endoderm | 1.59e-08 | 118 |
lymphoid system | 4.86e-08 | 3 |