FFCP PHASE1:Hg19::chr11:62300117..62300140,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:62300117..62300140,- | |||
|description=CAGE_peak_at_chr11:62300117..62300140,- | |description=CAGE_peak_at_chr11:62300117..62300140,- | ||
|id=chr11:62300117..62300140,- | |id=chr11:62300117..62300140,- | ||
|ontology_enrichment_celltype=CL:0000057!6.76e-11!75;CL:0002057!3.33e-10!42;CL:0000860!5.06e-10!45;CL:0002009!7.55e-08!65;CL:0002194!1.43e-07!63;CL:0000576!1.43e-07!63;CL:0000040!1.43e-07!63;CL:0000559!1.43e-07!63;CL:0000557!2.46e-07!71;CL:0002320!3.29e-07!365;CL:0002620!4.28e-07!23;CL:0000134!5.96e-07!358 | |ontology_enrichment_celltype=CL:0000057!6.76e-11!75;CL:0002057!3.33e-10!42;CL:0000860!5.06e-10!45;CL:0002009!7.55e-08!65;CL:0002194!1.43e-07!63;CL:0000576!1.43e-07!63;CL:0000040!1.43e-07!63;CL:0000559!1.43e-07!63;CL:0000557!2.46e-07!71;CL:0002320!3.29e-07!365;CL:0002620!4.28e-07!23;CL:0000134!5.96e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.98e-10;33!CL:0002057;3.98e-10;33!CL:0000473;2.57e-09;39!CL:0000234;2.57e-09;39!CL:0002620;8.73e-08;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.89e-11,76;CL:0000473,2.01e-11,48;CL:0000234,2.01e-11,48;CL:0000860,9.79e-11,42;CL:0002057,9.79e-11,42;CL:0002009,1.24e-08,61;CL:0002194,2.49e-08,59;CL:0000576,2.49e-08,59;CL:0000040,2.49e-08,59;CL:0000559,2.49e-08,59;CL:0002320,3.04e-08,361;CL:0000134,6.19e-08,354;CL:0000557,6.22e-08,67;CL:0002620,8.53e-08,23;CL:0000839,2.94e-07,66 | |||
|ontology_enrichment_development_v019=CL:0002057;1.43e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!5.51e-10!95;UBERON:0000926!1.27e-07!448;UBERON:0004120!1.27e-07!448;UBERON:0006603!1.27e-07!448;UBERON:0002384!6.40e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,1.93e-12,315;UBERON:0004120,1.93e-12,315;UBERON:0006603,1.93e-12,315;UBERON:0003102,3.30e-10,99;UBERON:0002384,5.07e-08,371;UBERON:0001434,5.22e-08,100;UBERON:0002199,3.16e-07,46;UBERON:0002416,3.16e-07,46;UBERON:0002371,3.52e-07,76;UBERON:0002097,6.02e-07,41;UBERON:0004923,8.68e-07,66 | |||
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| ||
|short_description=p@chr11:62300117..62300140,- | |short_description=p@chr11:62300117..62300140,- | ||
}} | }} |
Latest revision as of 23:39, 23 July 2015
Short description: | p@chr11:62300117..62300140, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:62300117..62300140, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.89e-11 | 76 |
defensive cell | 2.01e-11 | 48 |
phagocyte | 2.01e-11 | 48 |
classical monocyte | 9.79e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.79e-11 | 42 |
macrophage dendritic cell progenitor | 1.24e-08 | 61 |
monopoietic cell | 2.49e-08 | 59 |
monocyte | 2.49e-08 | 59 |
monoblast | 2.49e-08 | 59 |
promonocyte | 2.49e-08 | 59 |
connective tissue cell | 3.04e-08 | 361 |
mesenchymal cell | 6.19e-08 | 354 |
granulocyte monocyte progenitor cell | 6.22e-08 | 67 |
skin fibroblast | 8.53e-08 | 23 |
myeloid lineage restricted progenitor cell | 2.94e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 1.93e-12 | 315 |
mesoderm-derived structure | 1.93e-12 | 315 |
presumptive mesoderm | 1.93e-12 | 315 |
surface structure | 3.30e-10 | 99 |
connective tissue | 5.07e-08 | 371 |
skeletal system | 5.22e-08 | 100 |
integument | 3.16e-07 | 46 |
integumental system | 3.16e-07 | 46 |
bone marrow | 3.52e-07 | 76 |
skin of body | 6.02e-07 | 41 |
organ component layer | 8.68e-07 | 66 |