FFCP PHASE1:Mm9::chr14:55735065..55735110,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=319984 | |EntrezGene=319984 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=4bp_to_uc007tyh.1,uc007tyj.1_5end | |association_with_transcript=4bp_to_uc007tyh.1,uc007tyj.1_5end | ||
|cluster_id=chr14:55735065..55735110,- | |||
|description=CAGE_peak_7_at_Jph4_5end | |description=CAGE_peak_7_at_Jph4_5end | ||
|id=chr14:55735065..55735110,- | |id=chr14:55735065..55735110,- | ||
|ontology_enrichment_celltype=CL:0000117!3.13e-17!23;CL:0000337!3.13e-17!23;CL:0000540!2.86e-11!33;CL:0000047!2.86e-11!33;CL:0000031!2.86e-11!33;CL:0000404!2.86e-11!33;CL:0000393!3.04e-08!39;CL:0000211!3.04e-08!39;CL:0002319!9.38e-07!43 | |ontology_enrichment_celltype=CL:0000117!3.13e-17!23;CL:0000337!3.13e-17!23;CL:0000540!2.86e-11!33;CL:0000047!2.86e-11!33;CL:0000031!2.86e-11!33;CL:0000404!2.86e-11!33;CL:0000393!3.04e-08!39;CL:0000211!3.04e-08!39;CL:0002319!9.38e-07!43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.30e-25,23;CL:0000337,1.30e-25,23;CL:0000540,3.89e-16,33;CL:0000047,3.89e-16,33;CL:0000031,3.89e-16,33;CL:0000404,3.89e-16,33;CL:0000393,8.21e-13,39;CL:0000211,8.21e-13,39;CL:0002319,4.00e-11,43;CL:0000221,9.44e-11,44;CL:0000133,9.44e-11,44;CL:0002609,1.58e-10,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.07e-26!52;UBERON:0005068!1.07e-26!52;UBERON:0006241!1.07e-26!52;UBERON:0007135!1.07e-26!52;UBERON:0002020!1.69e-26!34;UBERON:0002346!1.39e-23!71;UBERON:0003075!1.39e-23!71;UBERON:0007284!1.39e-23!71;UBERON:0001017!3.15e-23!73;UBERON:0005743!3.15e-23!73;UBERON:0000955!4.72e-23!50;UBERON:0006238!4.72e-23!50;UBERON:0002616!2.93e-22!49;UBERON:0000073!4.43e-22!75;UBERON:0001016!4.43e-22!75;UBERON:0002791!7.11e-22!29;UBERON:0003528!7.11e-22!29;UBERON:0001893!7.11e-22!29;UBERON:0003080!2.85e-21!40;UBERON:0002780!1.06e-20!39;UBERON:0001890!1.06e-20!39;UBERON:0006240!1.06e-20!39;UBERON:0003056!1.36e-19!49;UBERON:0000033!2.77e-19!63;UBERON:0004121!1.22e-17!102;UBERON:0000924!1.22e-17!102;UBERON:0006601!1.22e-17!102;UBERON:0000956!3.33e-16!21;UBERON:0001869!3.33e-16!21;UBERON:0000203!3.33e-16!21;UBERON:0002619!1.52e-12!17;UBERON:0002021!1.05e-10!10;UBERON:0000411!1.05e-10!10;UBERON:0001950!1.05e-10!10;UBERON:0007811!6.42e-10!86;UBERON:0000153!6.44e-10!94;UBERON:0002420!8.16e-07!8;UBERON:0007245!8.16e-07!8;UBERON:0010009!8.16e-07!8;UBERON:0010011!8.16e-07!8;UBERON:0000454!8.16e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.04e-42,34;UBERON:0000073,6.07e-35,54;UBERON:0001049,2.66e-34,52;UBERON:0005068,2.66e-34,52;UBERON:0006241,2.66e-34,52;UBERON:0007135,2.66e-34,52;UBERON:0003528,2.88e-34,29;UBERON:0002791,2.88e-34,29;UBERON:0001893,2.88e-34,29;UBERON:0001017,9.52e-32,73;UBERON:0001016,1.30e-30,75;UBERON:0000956,1.33e-28,21;UBERON:0001869,1.33e-28,21;UBERON:0000203,1.33e-28,21;UBERON:0002780,7.07e-28,39;UBERON:0001890,7.07e-28,39;UBERON:0006240,7.07e-28,39;UBERON:0000955,2.95e-27,47;UBERON:0006238,2.95e-27,47;UBERON:0003080,5.56e-27,40;UBERON:0002346,4.88e-26,64;UBERON:0003075,4.88e-26,64;UBERON:0007284,4.88e-26,64;UBERON:0002616,5.46e-26,46;UBERON:0002619,4.84e-22,17;UBERON:0004121,6.94e-22,95;UBERON:0000924,6.94e-22,95;UBERON:0006601,6.94e-22,95;UBERON:0010371,1.24e-21,73;UBERON:0003056,1.40e-20,49;UBERON:0002021,8.29e-18,10;UBERON:0000411,8.29e-18,10;UBERON:0001950,8.29e-18,10;UBERON:0010314,3.40e-15,92;UBERON:0000025,1.79e-10,114;UBERON:0002240,4.96e-10,6;UBERON:0005174,4.96e-10,6;UBERON:0001137,4.96e-10,6;UBERON:0004111,3.40e-09,122;UBERON:0001948,4.19e-09,5;UBERON:0002315,4.19e-09,5;UBERON:0000369,1.27e-08,5;UBERON:0002435,1.27e-08,5;UBERON:0000204,1.27e-08,5;UBERON:0010082,1.27e-08,5;UBERON:0003076,1.36e-07,12;UBERON:0003057,1.36e-07,12;UBERON:0002420,4.42e-07,8;UBERON:0007245,4.42e-07,8;UBERON:0010009,4.42e-07,8;UBERON:0010011,4.42e-07,8;UBERON:0000454,4.42e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.43937983461316,5.28990979272033,3.1691570175309,0,0,0,0,0,0,0,6.53244557543409,9.99043943654511,5.8890989178387,5.99867067247988,4.63823935998388,2.69479758272899,3.25874601462004,3.67687514644008,0,2.42605942361857,2.15049146558741,2.37395317914349,6.40413505216868,2.6045668527838,0.558365998002762,0.56276261003168,1.68078072554491,5.59794312399969,4.27115042397309,4.65998614563251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0.461230994512117,0.150722640552623,0.23517741427141,0,0,0,0,0,0,0,0,1.17112318804619,1.8850203613211,0,0,0,0,0.898743836428936,2.74500361691176,7.66491547888473,3.82413504423008,5.8814555185976,2.28566849015516,3.89379031362618,0.101839363850316,0,0,0.210441855886474,0,0,0.180062129805349,0.150704817835715,0.272145996605311,0,0.468508622798644,0,0,0,0,0.219195732427575,0.278047249225598,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.2437757822584,17.4937841044784,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0.19496408711912,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.117211686592203,0,0,0,0.390438744296638,0,0,0,0,0.404810701674894,0,0,2.89189184779626,0,0.35613120733451,0.325773918707152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0.258717367565509,0,0,0.178368817602071,0,0.608929898229199,0,0,0,0,0,0.120625849856312,0,0,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0,0,0,0,0.56369293868419,0,0,0,0,0.337912250981556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.34177395402186,8.28585425712918,8.02053718815155,10.8267504876523,8.22099023724771,6.0431511791176,6.75022500231806,6.30449684513909,3.62513927187364,3.10656187051092,0,0.399024873401031,0.512200817262403,0.729320151204882,0.209613162627982,0.919217542250071,0.666740183404846,0.824140228955577,1.28367683836726,1.01078884705519,1.2673964994512,1.69763707247469,0.936415074698824,0.832326981263301,1.20614484806788,0.476293691283074,1.39061191133827,0.578727661391115,0.824171801606613,2.06078488188156,1.71434626192708,0.354951612318675,1.1921809497366,1.0174249164263,0.752875043322645,0.846146078916765,0.548783918618318,0.526139422875686,0.814824683075171,0.561142271657738,0.949080144993393,0.886540341380071,1.22769312950907,1.39443157067369,0.771626443924566,4.24677982494508,0.935726433781634,1.50409737833809,0.57386499620653,0.220591419119515,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.43937983461316,5.28990979272033,3.1691570175309,0,0,0,0,0,0,0,6.53244557543409,9.99043943654511,5.8890989178387,5.99867067247988,4.63823935998388,2.69479758272899,3.25874601462004,3.67687514644008,0,2.42605942361857,2.15049146558741,2.37395317914349,6.40413505216868,2.6045668527838,0.558365998002762,0.56276261003168,1.68078072554491,5.59794312399969,4.27115042397309,4.65998614563251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0.461230994512117,0.150722640552623,0.23517741427141,0,0,0,0,0,0,0,0,1.17112318804619,1.8850203613211,0,0,0,0,0.898743836428936,2.74500361691176,7.66491547888473,3.82413504423008,5.8814555185976,2.28566849015516,3.89379031362618,0.101839363850316,0,0,0.210441855886474,0,0,0.180062129805349,0.150704817835715,0.272145996605311,0,0.468508622798644,0,0,0,0,0.219195732427575,0.278047249225598,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.2437757822584,17.4937841044784,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0.19496408711912,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.117211686592203,0,0,0,0.390438744296638,0,0,0,0,0.404810701674894,0,0,2.89189184779626,0,0.35613120733451,0.325773918707152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0.258717367565509,0,0,0.178368817602071,0,0.608929898229199,0,0,0,0,0,0.120625849856312,0,0,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0,0,0,0,0.56369293868419,0,0,0,0,0.337912250981556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.34177395402186,8.28585425712918,8.02053718815155,10.8267504876523,8.22099023724771,6.0431511791176,6.75022500231806,6.30449684513909,3.62513927187364,3.10656187051092,0,0.399024873401031,0.512200817262403,0.729320151204882,0.209613162627982,0.919217542250071,0.666740183404846,0.824140228955577,1.28367683836726,1.01078884705519,1.2673964994512,1.69763707247469,0.936415074698824,0.832326981263301,1.20614484806788,0.476293691283074,1.39061191133827,0.578727661391115,0.824171801606613,2.06078488188156,1.71434626192708,0.354951612318675,1.1921809497366,1.0174249164263,0.752875043322645,0.846146078916765,0.548783918618318,0.526139422875686,0.814824683075171,0.561142271657738,0.949080144993393,0.886540341380071,1.22769312950907,1.39443157067369,0.771626443924566,4.24677982494508,0.935726433781634,1.50409737833809,0.57386499620653,0.220591419119515,0.231867835620421 | ||
|short_description=p7@Jph4 | |short_description=p7@Jph4 | ||
}} | }} |
Latest revision as of 03:27, 26 September 2015
Short description: | p7@Jph4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Jph4_5end |
Coexpression cluster: | NA |
Association with transcript: | 4bp_to_uc007tyh.1, uc007tyj.1_5end |
EntrezGene: | Jph4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.30e-25 | 23 |
neuroblast (sensu Vertebrata) | 1.30e-25 | 23 |
neuron | 3.89e-16 | 33 |
neuronal stem cell | 3.89e-16 | 33 |
neuroblast | 3.89e-16 | 33 |
electrically signaling cell | 3.89e-16 | 33 |
electrically responsive cell | 8.21e-13 | 39 |
electrically active cell | 8.21e-13 | 39 |
neural cell | 4.00e-11 | 43 |
ectodermal cell | 9.44e-11 | 44 |
neurectodermal cell | 9.44e-11 | 44 |
neuron of cerebral cortex | 1.58e-10 | 6 |