FFCP PHASE1:Mm9::chr14:55735002..55735027,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=319984 | |EntrezGene=319984 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=87bp_to_uc007tyh.1,uc007tyj.1_5end | |association_with_transcript=87bp_to_uc007tyh.1,uc007tyj.1_5end | ||
|cluster_id=chr14:55735002..55735027,- | |||
|description=CAGE_peak_5_at_Jph4_5end | |description=CAGE_peak_5_at_Jph4_5end | ||
|id=chr14:55735002..55735027,- | |id=chr14:55735002..55735027,- | ||
|ontology_enrichment_celltype=CL:0000117!1.92e-17!23;CL:0000337!1.92e-17!23;CL:0000540!2.12e-14!33;CL:0000047!2.12e-14!33;CL:0000031!2.12e-14!33;CL:0000404!2.12e-14!33;CL:0000393!1.43e-10!39;CL:0000211!1.43e-10!39;CL:0002319!1.96e-09!43;CL:0000221!5.39e-09!44;CL:0000133!5.39e-09!44;CL:0000055!8.68e-07!50 | |ontology_enrichment_celltype=CL:0000117!1.92e-17!23;CL:0000337!1.92e-17!23;CL:0000540!2.12e-14!33;CL:0000047!2.12e-14!33;CL:0000031!2.12e-14!33;CL:0000404!2.12e-14!33;CL:0000393!1.43e-10!39;CL:0000211!1.43e-10!39;CL:0002319!1.96e-09!43;CL:0000221!5.39e-09!44;CL:0000133!5.39e-09!44;CL:0000055!8.68e-07!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.42e-30,23;CL:0000337,1.42e-30,23;CL:0000540,3.90e-21,33;CL:0000047,3.90e-21,33;CL:0000031,3.90e-21,33;CL:0000404,3.90e-21,33;CL:0000393,7.05e-17,39;CL:0000211,7.05e-17,39;CL:0002319,1.03e-14,43;CL:0000221,3.11e-14,44;CL:0000133,3.11e-14,44;CL:0002609,3.32e-08,6;CL:0002321,9.78e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.46e-29!73;UBERON:0005743!3.46e-29!73;UBERON:0000073!8.91e-28!75;UBERON:0001016!8.91e-28!75;UBERON:0001049!4.06e-27!52;UBERON:0005068!4.06e-27!52;UBERON:0006241!4.06e-27!52;UBERON:0007135!4.06e-27!52;UBERON:0000955!1.12e-25!50;UBERON:0006238!1.12e-25!50;UBERON:0002616!8.05e-25!49;UBERON:0002020!1.38e-24!34;UBERON:0002346!2.73e-24!71;UBERON:0003075!2.73e-24!71;UBERON:0007284!2.73e-24!71;UBERON:0000033!9.44e-22!63;UBERON:0004121!2.91e-21!102;UBERON:0000924!2.91e-21!102;UBERON:0006601!2.91e-21!102;UBERON:0003080!4.25e-21!40;UBERON:0002791!1.41e-20!29;UBERON:0003528!1.41e-20!29;UBERON:0001893!1.41e-20!29;UBERON:0002780!2.49e-20!39;UBERON:0001890!2.49e-20!39;UBERON:0006240!2.49e-20!39;UBERON:0003056!5.80e-19!49;UBERON:0000956!1.32e-14!21;UBERON:0001869!1.32e-14!21;UBERON:0000203!1.32e-14!21;UBERON:0002619!8.07e-12!17;UBERON:0007811!1.11e-11!86;UBERON:0000153!7.47e-11!94;UBERON:0002021!1.15e-10!10;UBERON:0000411!1.15e-10!10;UBERON:0001950!1.15e-10!10;UBERON:0002420!3.76e-07!8;UBERON:0007245!3.76e-07!8;UBERON:0010009!3.76e-07!8;UBERON:0010011!3.76e-07!8;UBERON:0000454!3.76e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.94e-47,54;UBERON:0002020,7.96e-45,34;UBERON:0001049,1.50e-43,52;UBERON:0005068,1.50e-43,52;UBERON:0006241,1.50e-43,52;UBERON:0007135,1.50e-43,52;UBERON:0001017,1.57e-43,73;UBERON:0001016,4.80e-42,75;UBERON:0003528,1.95e-37,29;UBERON:0002791,1.95e-37,29;UBERON:0001893,1.95e-37,29;UBERON:0000955,1.45e-36,47;UBERON:0006238,1.45e-36,47;UBERON:0002616,4.41e-35,46;UBERON:0002346,2.46e-33,64;UBERON:0003075,2.46e-33,64;UBERON:0007284,2.46e-33,64;UBERON:0003080,9.88e-32,40;UBERON:0004121,1.22e-30,95;UBERON:0000924,1.22e-30,95;UBERON:0006601,1.22e-30,95;UBERON:0002780,2.23e-30,39;UBERON:0001890,2.23e-30,39;UBERON:0006240,2.23e-30,39;UBERON:0010371,6.98e-28,73;UBERON:0000956,1.90e-26,21;UBERON:0001869,1.90e-26,21;UBERON:0000203,1.90e-26,21;UBERON:0003056,2.67e-24,49;UBERON:0002619,2.47e-21,17;UBERON:0010314,6.80e-20,92;UBERON:0002021,3.63e-18,10;UBERON:0000411,3.63e-18,10;UBERON:0001950,3.63e-18,10;UBERON:0000025,5.27e-14,114;UBERON:0004111,2.12e-12,122;UBERON:0002420,9.09e-12,8;UBERON:0007245,9.09e-12,8;UBERON:0010009,9.09e-12,8;UBERON:0010011,9.09e-12,8;UBERON:0000454,9.09e-12,8;UBERON:0003076,1.49e-11,12;UBERON:0003057,1.49e-11,12;UBERON:0002240,2.65e-09,6;UBERON:0005174,2.65e-09,6;UBERON:0001137,2.65e-09,6;UBERON:0011216,7.71e-09,194;UBERON:0000369,2.18e-08,5;UBERON:0002435,2.18e-08,5;UBERON:0000204,2.18e-08,5;UBERON:0010082,2.18e-08,5;UBERON:0001948,3.25e-08,5;UBERON:0002315,3.25e-08,5 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21112554392781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64169629547276,5.28990979272033,6.33831403506179,0,0,0,0,0,0,0.384218305321555,3.31806759387129,2.70011876663381,1.68259969081106,7.14127461009509,4.19650227808066,1.46988959057945,2.1086003624012,4.5960939330501,7.70811166995721,5.36286819957788,3.99376986466233,3.69281605644543,4.20843160571084,3.12548022334056,3.35019598801657,1.12552522006336,5.19514042441154,5.89257170947335,5.41012387036591,2.60959224155421,0,0,0,0,0,0.539703191637817,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0.148442139064825,0,0.304465478312141,0.230615497256059,0,0.117588707135705,0,0,0,0,0,0,0,0,5.5628351432194,5.23616767033638,0,0,0,0,4.34392854273986,14.640019290196,9.92669381691629,12.3415267336516,13.2972037811772,4.1557608911912,7.30085683804909,0.203678727700633,0.124406970610093,0,0,0,0,0.180062129805349,0,0.272145996605311,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0.175951124163949,0.219195732427575,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.5055154736432,9.2614151141356,0,0,0,0,0.128867461322093,0.403367049246685,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0,0,0,0,0,0.189667900953082,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.37156238974363,2.34423373184406,0,0,0,0.390438744296638,0.646270193198397,0,0,0.283076530788832,0,0,1.18586333383957,5.78378369559253,0,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0,0,0.178368817602071,0.164549020602121,0.608929898229199,0,0,0.220528398054962,0,0,0.0603129249281559,0,0,0,2.41052892613663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0.117357238645754,0.13020438484395,0.209718688851422,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.6368108063632,16.1113832777512,14.8952833494243,10.3111909406213,17.1270629942661,21.1510291269116,9.45031500324528,10.3573876741571,13.1411298605419,12.4262474820437,0.103787347584177,0.399024873401031,0.170733605754134,1.21553358534147,0.419226325255965,1.47074806760011,1.55572709461131,0.206035057238894,0.962757628775446,0.758091635291392,1.2673964994512,0.565879024158229,0.655490552289177,0.704276676453562,0.574354689556133,0.476293691283074,0.463537303779422,0.964546102318525,0,0.588795680537589,1.02860775715625,0,0.953744759789284,0.290692833264657,0.658765662907314,0.507687647350059,0.365855945745545,0.263069711437843,0.271608227691724,0.561142271657738,1.06771516311757,0.886540341380071,0.409231043169689,0.77468420592983,0.578719832943424,2.24829520144151,0.935726433781634,1.28922632428979,0.956441660344217,0,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21112554392781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64169629547276,5.28990979272033,6.33831403506179,0,0,0,0,0,0,0.384218305321555,3.31806759387129,2.70011876663381,1.68259969081106,7.14127461009509,4.19650227808066,1.46988959057945,2.1086003624012,4.5960939330501,7.70811166995721,5.36286819957788,3.99376986466233,3.69281605644543,4.20843160571084,3.12548022334056,3.35019598801657,1.12552522006336,5.19514042441154,5.89257170947335,5.41012387036591,2.60959224155421,0,0,0,0,0,0.539703191637817,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0.148442139064825,0,0.304465478312141,0.230615497256059,0,0.117588707135705,0,0,0,0,0,0,0,0,5.5628351432194,5.23616767033638,0,0,0,0,4.34392854273986,14.640019290196,9.92669381691629,12.3415267336516,13.2972037811772,4.1557608911912,7.30085683804909,0.203678727700633,0.124406970610093,0,0,0,0,0.180062129805349,0,0.272145996605311,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0.175951124163949,0.219195732427575,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.5055154736432,9.2614151141356,0,0,0,0,0.128867461322093,0.403367049246685,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0,0,0,0,0,0.189667900953082,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.37156238974363,2.34423373184406,0,0,0,0.390438744296638,0.646270193198397,0,0,0.283076530788832,0,0,1.18586333383957,5.78378369559253,0,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0,0,0.178368817602071,0.164549020602121,0.608929898229199,0,0,0.220528398054962,0,0,0.0603129249281559,0,0,0,2.41052892613663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0.117357238645754,0.13020438484395,0.209718688851422,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.6368108063632,16.1113832777512,14.8952833494243,10.3111909406213,17.1270629942661,21.1510291269116,9.45031500324528,10.3573876741571,13.1411298605419,12.4262474820437,0.103787347584177,0.399024873401031,0.170733605754134,1.21553358534147,0.419226325255965,1.47074806760011,1.55572709461131,0.206035057238894,0.962757628775446,0.758091635291392,1.2673964994512,0.565879024158229,0.655490552289177,0.704276676453562,0.574354689556133,0.476293691283074,0.463537303779422,0.964546102318525,0,0.588795680537589,1.02860775715625,0,0.953744759789284,0.290692833264657,0.658765662907314,0.507687647350059,0.365855945745545,0.263069711437843,0.271608227691724,0.561142271657738,1.06771516311757,0.886540341380071,0.409231043169689,0.77468420592983,0.578719832943424,2.24829520144151,0.935726433781634,1.28922632428979,0.956441660344217,0,0 | ||
|short_description=p5@Jph4 | |short_description=p5@Jph4 | ||
}} | }} |
Latest revision as of 03:26, 26 September 2015
Short description: | p5@Jph4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Jph4_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 87bp_to_uc007tyh.1, uc007tyj.1_5end |
EntrezGene: | Jph4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.42e-30 | 23 |
neuroblast (sensu Vertebrata) | 1.42e-30 | 23 |
neuron | 3.90e-21 | 33 |
neuronal stem cell | 3.90e-21 | 33 |
neuroblast | 3.90e-21 | 33 |
electrically signaling cell | 3.90e-21 | 33 |
electrically responsive cell | 7.05e-17 | 39 |
electrically active cell | 7.05e-17 | 39 |
neural cell | 1.03e-14 | 43 |
ectodermal cell | 3.11e-14 | 44 |
neurectodermal cell | 3.11e-14 | 44 |
neuron of cerebral cortex | 3.32e-08 | 6 |
embryonic cell | 9.78e-07 | 70 |