FFCP PHASE1:Mm9::chr14:28051195..28051198,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=71704 | |EntrezGene=71704 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=33 | |||
|TSSclassifier=NA | |||
|UniProt=Q91X46 | |UniProt=Q91X46 | ||
|association_with_transcript=-26bp_to_ENSMUST00000049206,NM_027871,uc007stp.1_5end | |association_with_transcript=-26bp_to_ENSMUST00000049206,NM_027871,uc007stp.1_5end | ||
|cluster_id=chr14:28051195..28051198,+ | |||
|description=CAGE_peak_6_at_Arhgef3_5end | |description=CAGE_peak_6_at_Arhgef3_5end | ||
|id=chr14:28051195..28051198,+ | |id=chr14:28051195..28051198,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.87e-17,9;CL:0000789,5.87e-17,9;CL:0002420,5.87e-17,9;CL:0002419,5.87e-17,9;CL:0000790,5.87e-17,9;CL:0000084,7.22e-14,11;CL:0000827,7.22e-14,11;CL:0000624,1.00e-12,8;CL:0000838,1.05e-12,12;CL:0000542,1.01e-11,13;CL:0000051,1.01e-11,13;CL:0000738,6.11e-09,17;CL:0002087,6.11e-09,17;CL:0000815,1.38e-07,1;CL:0000792,1.38e-07,1;CL:0000625,5.53e-07,1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000065!5.09e-13!41;UBERON:0004177!1.36e-12!29;UBERON:0001004!1.84e-12!42;UBERON:0002370!6.03e-12!23;UBERON:0000974!6.03e-12!23;UBERON:0004807!6.03e-12!23;UBERON:0005058!6.03e-12!23;UBERON:0003351!6.03e-12!23;UBERON:0009113!6.03e-12!23;UBERON:0003295!6.03e-12!23;UBERON:0009722!6.03e-12!23;UBERON:0005562!6.03e-12!23;UBERON:0007690!6.03e-12!23;UBERON:0006562!3.72e-11!24;UBERON:0003408!3.72e-11!24;UBERON:0001557!3.72e-11!24;UBERON:0001042!3.72e-11!24;UBERON:0008814!3.72e-11!24;UBERON:0009145!3.72e-11!24;UBERON:0002390!7.63e-10!45;UBERON:0003061!7.63e-10!45;UBERON:0002193!9.71e-10!48;UBERON:0000072!3.67e-09!27;UBERON:0000063!2.97e-08!35;UBERON:0000077!8.34e-07!97 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,7.76e-20,23;UBERON:0000974,7.76e-20,23;UBERON:0004807,7.76e-20,23;UBERON:0005058,7.76e-20,23;UBERON:0003351,7.76e-20,23;UBERON:0009113,7.76e-20,23;UBERON:0003295,7.76e-20,23;UBERON:0009722,7.76e-20,23;UBERON:0005562,7.76e-20,23;UBERON:0007690,7.76e-20,23;UBERON:0006562,5.69e-19,24;UBERON:0003408,5.69e-19,24;UBERON:0001557,5.69e-19,24;UBERON:0001042,5.69e-19,24;UBERON:0008814,5.69e-19,24;UBERON:0009145,5.69e-19,24;UBERON:0000072,9.29e-17,27;UBERON:0004177,1.55e-15,29;UBERON:0005057,1.55e-15,29;UBERON:0000065,3.16e-13,41;UBERON:0001004,6.97e-13,42;UBERON:0000077,1.05e-12,35;UBERON:0007811,2.53e-12,36;UBERON:0002193,3.31e-11,48;UBERON:0002405,3.31e-11,48;UBERON:0000153,3.78e-10,43;UBERON:0002390,1.19e-09,45;UBERON:0003061,1.19e-09,45;UBERON:0003929,1.06e-07,55;UBERON:0000029,1.83e-07,1;UBERON:0001097,1.83e-07,1;UBERON:0003968,1.83e-07,1;UBERON:0001467,1.83e-07,1;UBERON:0005911,2.34e-07,69;UBERON:0002368,5.71e-07,60 | |||
|phase1_expression=0,0,0,0,0,0,0,3.48632973292256,0,0.468129052643987,0,0.239316476986009,2.39681021903688,3.93391810885488,0.333109761815663,0,0,0.788655413395594,0.959801035240171,0.84877930359606,0.255129870453209,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17608642603403,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,2.33044095282455,0.148442139064825,0.346970653532272,0.608930956624282,0,0.150722640552623,0.117588707135705,0,0.247194967734374,0.433798070759735,0,0.161766849947409,0,0,0,1.17112318804619,0.628340120440365,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0.420883711772948,0.130120442962704,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0.207125772535502,0.234526059981096,0,0,0,0.154267112887378,0,0,0.583826711835847,0,0,0.0810688095458557,0.438599962275997,0,0.134206418760372,0,0.102904612379284,0.330418782983798,0,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0,0,0.19496408711912,0,0.216138049874694,0.199141273254367,0.189667900953082,0.114248512609729,0,0,0,0.210407459670956,0,0,0.31399745568275,0,0,0,0.196558995113203,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0.234690248288502,0.167506257441816,0.238043640886014,0,0.945810864637146,0.221464689648775,0.637819074629948,0.81931657357869,1.38147985492716,0.723245292907558,0,0,0,0.275936746304732,0,0.117211686592203,0,0.504941854408746,0,0,0,0,0.222798674082394,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0.188605079755898,0,0.307435147943927,0,0.363533729477506,0,0.632073515871632,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0.42366414172764,0.220528398054962,0,0.161464426695906,0.180938774784468,0.238744688006273,0,0,0.18542530201051,0.512612642393558,0,0,0.188368457004691,0.27338845544205,0.228778173206523,0.339956859987711,0.419854356970974,0.552799895217695,0,0.158167996790568,0,0,0,0,0.134864346384821,0,0,0.259229946583586,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,1.89606672376907,0.608175645870493,0.513554785824136,0.649604114888975,0.537080087002444,1.98681354781265,0.841368146639782,1.03382669022204,0.807731599585181,0.990688486514998,1.61321896218945,1.26695244961678,1.53938946624527,1.5193997283604,0,0,0,0,0,0.187682475451182,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0.0640251524048693,0,0,0.115884325944855,0,0,0.147198920134397,0,0.177475806159338,0.476872379894642,0,0,0.169229215783353,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,3.48632973292256,0,0.468129052643987,0,0.239316476986009,2.39681021903688,3.93391810885488,0.333109761815663,0,0,0.788655413395594,0.959801035240171,0.84877930359606,0.255129870453209,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17608642603403,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,2.33044095282455,0.148442139064825,0.346970653532272,0.608930956624282,0,0.150722640552623,0.117588707135705,0,0.247194967734374,0.433798070759735,0,0.161766849947409,0,0,0,1.17112318804619,0.628340120440365,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0.420883711772948,0.130120442962704,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0.207125772535502,0.234526059981096,0,0,0,0.154267112887378,0,0,0.583826711835847,0,0,0.0810688095458557,0.438599962275997,0,0.134206418760372,0,0.102904612379284,0.330418782983798,0,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0,0,0.19496408711912,0,0.216138049874694,0.199141273254367,0.189667900953082,0.114248512609729,0,0,0,0.210407459670956,0,0,0.31399745568275,0,0,0,0.196558995113203,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0.234690248288502,0.167506257441816,0.238043640886014,0,0.945810864637146,0.221464689648775,0.637819074629948,0.81931657357869,1.38147985492716,0.723245292907558,0,0,0,0.275936746304732,0,0.117211686592203,0,0.504941854408746,0,0,0,0,0.222798674082394,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0.188605079755898,0,0.307435147943927,0,0.363533729477506,0,0.632073515871632,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0.42366414172764,0.220528398054962,0,0.161464426695906,0.180938774784468,0.238744688006273,0,0,0.18542530201051,0.512612642393558,0,0,0.188368457004691,0.27338845544205,0.228778173206523,0.339956859987711,0.419854356970974,0.552799895217695,0,0.158167996790568,0,0,0,0,0.134864346384821,0,0,0.259229946583586,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,1.89606672376907,0.608175645870493,0.513554785824136,0.649604114888975,0.537080087002444,1.98681354781265,0.841368146639782,1.03382669022204,0.807731599585181,0.990688486514998,1.61321896218945,1.26695244961678,1.53938946624527,1.5193997283604,0,0,0,0,0,0.187682475451182,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0.0640251524048693,0,0,0.115884325944855,0,0,0.147198920134397,0,0.177475806159338,0.476872379894642,0,0,0.169229215783353,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0 | ||
|short_description=p6@Arhgef3 | |short_description=p6@Arhgef3 | ||
}} | }} |
Latest revision as of 20:14, 25 September 2015
Short description: | p6@Arhgef3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Arhgef3_5end |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | -26bp_to_ENSMUST00000049206, NM_027871, uc007stp.1_5end |
EntrezGene: | Arhgef3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 5.87e-17 | 9 |
alpha-beta T cell | 5.87e-17 | 9 |
immature T cell | 5.87e-17 | 9 |
mature T cell | 5.87e-17 | 9 |
immature alpha-beta T cell | 5.87e-17 | 9 |
T cell | 7.22e-14 | 11 |
pro-T cell | 7.22e-14 | 11 |
CD4-positive, alpha-beta T cell | 1.00e-12 | 8 |
lymphoid lineage restricted progenitor cell | 1.05e-12 | 12 |
lymphocyte | 1.01e-11 | 13 |
common lymphoid progenitor | 1.01e-11 | 13 |
leukocyte | 6.11e-09 | 17 |
nongranular leukocyte | 6.11e-09 | 17 |
regulatory T cell | 1.38e-07 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.38e-07 | 1 |
CD8-positive, alpha-beta T cell | 5.53e-07 | 1 |