FFCP PHASE1:Mm9::chr14:122505056..122505063,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=319727 | |EntrezGene=319727 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=328bp_to_uc007vat.1_5end | |association_with_transcript=328bp_to_uc007vat.1_5end | ||
|cluster_id=chr14:122505056..122505063,- | |||
|description=CAGE_peak_2_at_A330035P11Rik_5end | |description=CAGE_peak_2_at_A330035P11Rik_5end | ||
|id=chr14:122505056..122505063,- | |id=chr14:122505056..122505063,- | ||
|ontology_enrichment_celltype=CL:0002563!6.40e-10!9;CL:0002251!6.40e-10!9;CL:0002076!1.62e-08!15;CL:0000066!7.99e-08!25;CL:0000239!2.02e-07!6;CL:0000677!2.02e-07!6;CL:0000212!2.02e-07!6;CL:0000584!2.02e-07!6 | |ontology_enrichment_celltype=CL:0002563!6.40e-10!9;CL:0002251!6.40e-10!9;CL:0002076!1.62e-08!15;CL:0000066!7.99e-08!25;CL:0000239!2.02e-07!6;CL:0000677!2.02e-07!6;CL:0000212!2.02e-07!6;CL:0000584!2.02e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.82e-22,9;CL:0002251,5.82e-22,9;CL:0000239,7.26e-16,6;CL:0000677,7.26e-16,6;CL:0000584,7.26e-16,6;CL:0000075,1.70e-13,7;CL:0000066,7.43e-13,25;CL:0002076,1.68e-12,15;CL:0000682,3.35e-09,3;CL:0000223,5.83e-09,20;CL:0002250,1.09e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!3.62e-21!59;UBERON:0000160!6.23e-21!43;UBERON:0000344!1.02e-15!15;UBERON:0001242!8.66e-14!13;UBERON:0000060!8.66e-14!13;UBERON:0001262!8.66e-14!13;UBERON:0004786!8.66e-14!13;UBERON:0004119!9.10e-13!130;UBERON:0000925!9.10e-13!130;UBERON:0006595!9.10e-13!130;UBERON:0001007!8.78e-12!128;UBERON:0001555!8.78e-12!128;UBERON:0007026!8.78e-12!128;UBERON:0004923!2.92e-11!24;UBERON:0004921!1.35e-10!126;UBERON:0004185!1.35e-10!126;UBERON:0003350!6.40e-10!9;UBERON:0004808!6.40e-10!9;UBERON:0001277!6.40e-10!9;UBERON:0000485!1.44e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.40e-43,31;UBERON:0000344,3.47e-36,15;UBERON:0001242,1.92e-31,13;UBERON:0001262,1.92e-31,13;UBERON:0004786,1.92e-31,13;UBERON:0005409,4.58e-29,47;UBERON:0004923,3.57e-24,24;UBERON:0003350,5.82e-22,9;UBERON:0004808,5.82e-22,9;UBERON:0001277,5.82e-22,9;UBERON:0000485,1.16e-17,11;UBERON:0004119,2.97e-12,118;UBERON:0000925,2.97e-12,118;UBERON:0006595,2.97e-12,118;UBERON:0001007,1.65e-11,116;UBERON:0001555,1.65e-11,116;UBERON:0007026,1.65e-11,116;UBERON:0002108,2.96e-10,4;UBERON:0004921,1.27e-09,114;UBERON:0000331,2.83e-08,3;UBERON:0002116,2.83e-08,3;UBERON:0001204,2.83e-08,3;UBERON:0001168,2.83e-08,3;UBERON:0007023,6.39e-08,51 | |||
|phase1_expression=0,8.37540978334467,3.63999391511629,6.35174843744343,3.50627010962443,2.51818907867835,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,3.03985603307473,3.21172993494038,6.31655160526522,5.1691439539089,4.52489588640367,2.28028103347649,2.26827116783938,4.43461021310609,0,0,0,2.02196133825892,2.65975432573588,1.22501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0.449949858640699,0,0,0,0.384218305321555,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448026887097336,0.280888840263504,0.170430322578058,0,0,0,0,0,0,0.216491041011214,0.506719730950197,0.505524445014783,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.59175283654366,0,0,4.85368404896324,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0.505445516867349,0,0,0,0,0,0.0680364991513279,0.12811372028485,0,0,0,0.378212160335639,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.60837565967596,4.7601101999438,0,0,0.128867461322093,0.201683524623343,0.444756087689741,1.33157938278791,2.84717436926707,0.823494773620054,1.00534083520108,0.397912944082302,1.55971269695296,3.59527763461689,3.24207074812041,2.78797782556114,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0.141940085208269,0,0,1.48473110675282,0,0,0,0.188605079755898,0,0.307435147943927,0,0.363533729477506,0.712994756769443,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0.23467170806371,1.27099242518292,1.7642271844397,0.32977250588296,0,0,0,0,1.7488850197791,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0.203319467126849,0.216010681643603,0.209088296014469,0.218362563746178,0.269728692769641,0.0826534557253359,0.523511883968059,2.46268449254406,0,2.25477175473676,0,0,0,0.258319646955462,0,0,0.13020438484395,0.104859344425711,0,0,0,0.405450430580328,0.205421914329655,0.25984164595559,0,0,0.240390899039938,0.147689527174577,0,0,0,0.0974578807397524,0.0962118416403295,0,0.226730383615211,0.221985953374065,0.0897138566094757,0,0.19318959403219,0,1.46521299413812,0.857473516316263,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0.183843508450014,0,0.412070114477788,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0.347652977834566,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0,0.0941093804153306,0,0.182927972872773,0.263069711437843,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,8.37540978334467,3.63999391511629,6.35174843744343,3.50627010962443,2.51818907867835,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,3.03985603307473,3.21172993494038,6.31655160526522,5.1691439539089,4.52489588640367,2.28028103347649,2.26827116783938,4.43461021310609,0,0,0,2.02196133825892,2.65975432573588,1.22501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0.449949858640699,0,0,0,0.384218305321555,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448026887097336,0.280888840263504,0.170430322578058,0,0,0,0,0,0,0.216491041011214,0.506719730950197,0.505524445014783,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.59175283654366,0,0,4.85368404896324,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0.505445516867349,0,0,0,0,0,0.0680364991513279,0.12811372028485,0,0,0,0.378212160335639,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.60837565967596,4.7601101999438,0,0,0.128867461322093,0.201683524623343,0.444756087689741,1.33157938278791,2.84717436926707,0.823494773620054,1.00534083520108,0.397912944082302,1.55971269695296,3.59527763461689,3.24207074812041,2.78797782556114,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0.141940085208269,0,0,1.48473110675282,0,0,0,0.188605079755898,0,0.307435147943927,0,0.363533729477506,0.712994756769443,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0.23467170806371,1.27099242518292,1.7642271844397,0.32977250588296,0,0,0,0,1.7488850197791,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0.203319467126849,0.216010681643603,0.209088296014469,0.218362563746178,0.269728692769641,0.0826534557253359,0.523511883968059,2.46268449254406,0,2.25477175473676,0,0,0,0.258319646955462,0,0,0.13020438484395,0.104859344425711,0,0,0,0.405450430580328,0.205421914329655,0.25984164595559,0,0,0.240390899039938,0.147689527174577,0,0,0,0.0974578807397524,0.0962118416403295,0,0.226730383615211,0.221985953374065,0.0897138566094757,0,0.19318959403219,0,1.46521299413812,0.857473516316263,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0.183843508450014,0,0.412070114477788,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0.347652977834566,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0,0.0941093804153306,0,0.182927972872773,0.263069711437843,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@A330035P11Rik | |short_description=p2@A330035P11Rik | ||
}} | }} |
Latest revision as of 17:06, 25 September 2015
Short description: | p2@A330035P11Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_A330035P11Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 328bp_to_uc007vat.1_5end |
EntrezGene: | A330035P11Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 5.82e-22 | 9 |
epithelial cell of alimentary canal | 5.82e-22 | 9 |
brush border epithelial cell | 7.26e-16 | 6 |
gut absorptive cell | 7.26e-16 | 6 |
enterocyte | 7.26e-16 | 6 |
columnar/cuboidal epithelial cell | 1.70e-13 | 7 |
epithelial cell | 7.43e-13 | 25 |
endo-epithelial cell | 1.68e-12 | 15 |
M cell of gut | 3.35e-09 | 3 |
endodermal cell | 5.83e-09 | 20 |
intestinal crypt stem cell | 1.09e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.40e-43 | 31 |
mucosa | 3.47e-36 | 15 |
intestinal mucosa | 1.92e-31 | 13 |
wall of intestine | 1.92e-31 | 13 |
gastrointestinal system mucosa | 1.92e-31 | 13 |
gastrointestinal system | 4.58e-29 | 47 |
organ component layer | 3.57e-24 | 24 |
epithelium of mucosa | 5.82e-22 | 9 |
gastrointestinal system epithelium | 5.82e-22 | 9 |
intestinal epithelium | 5.82e-22 | 9 |
simple columnar epithelium | 1.16e-17 | 11 |
endoderm-derived structure | 2.97e-12 | 118 |
endoderm | 2.97e-12 | 118 |
presumptive endoderm | 2.97e-12 | 118 |
digestive system | 1.65e-11 | 116 |
digestive tract | 1.65e-11 | 116 |
primitive gut | 1.65e-11 | 116 |
small intestine | 2.96e-10 | 4 |
subdivision of digestive tract | 1.27e-09 | 114 |
ileal mucosa | 2.83e-08 | 3 |
ileum | 2.83e-08 | 3 |
mucosa of small intestine | 2.83e-08 | 3 |
wall of small intestine | 2.83e-08 | 3 |
adult organism | 6.39e-08 | 51 |