FFCP PHASE1:Hg19::chr11:2160567..2160571,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3481 | |EntrezGene=3481 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5466 | |HGNC=5466 | ||
|TSSclassifier=strong | |||
|UniProt=P01344 | |UniProt=P01344 | ||
|association_with_transcript=47bp_to_ENST00000416167_5end | |association_with_transcript=47bp_to_ENST00000416167_5end | ||
|cluster_id=chr11:2160567..2160571,- | |||
|coexpression_cluster_id=C172 | |||
|description=CAGE_peak_51_at_IGF2_5end | |description=CAGE_peak_51_at_IGF2_5end | ||
|id=chr11:2160567..2160571,- | |id=chr11:2160567..2160571,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000349;1.96e-23;19!CL:0002541;6.28e-11;3!CL:0002577;8.78e-11;3!CL:0002575;7.56e-08;2!CL:0002536;1.15e-07;2!CL:0002537;5.01e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.24e-23,19;CL:0002577,7.83e-11,3;CL:0002541,8.65e-11,3;CL:0002575,6.28e-08,2;CL:0002536,1.19e-07,2;CL:0002537,5.33e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0003104;1.72e-08;31!UBERON:0004161;1.64e-07;11!UBERON:0007297;2.71e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!4.58e-16!14;UBERON:0000158!4.58e-16!14;UBERON:0003124!6.88e-12!7;UBERON:0007023!1.17e-11!115;UBERON:0000478!3.29e-11!24;UBERON:0001987!1.54e-07!4;UBERON:0004340!1.54e-07!4;UBERON:0004923!2.46e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;6.06e-25;24!UBERON:0005631;5.18e-21;10!UBERON:0000158;5.18e-21;10!UBERON:0001987;5.70e-14;4!UBERON:0000305;2.37e-12;7!UBERON:0003124;6.28e-11;3!UBERON:0000920;6.28e-11;3!UBERON:0004151;8.77e-10;3!UBERON:0000922;1.71e-08;49!UBERON:0002081;4.54e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,8.32e-33,14;UBERON:0000158,8.32e-33,14;UBERON:0000478,6.95e-25,24;UBERON:0003124,4.57e-23,7;UBERON:0001987,5.17e-14,4;UBERON:0004340,5.17e-14,4;UBERON:0000305,2.61e-12,7;UBERON:0000920,8.65e-11,3;UBERON:0004871,1.01e-10,8;UBERON:0004151,5.91e-10,3;UBERON:0002081,4.26e-07,2;UBERON:0010227,4.26e-07,2;UBERON:0004923,7.61e-07,66 | |||
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| ||
|short_description=p51@IGF2 | |short_description=p51@IGF2 | ||
}} | }} |
Latest revision as of 08:50, 17 September 2015
Short description: | p51@IGF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_51_at_IGF2_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | 47bp_to_ENST00000416167_5end |
EntrezGene: | IGF2 |
HGNC: | 5466 |
UniProt: | P01344 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.24e-23 | 19 |
placental epithelial cell | 7.83e-11 | 3 |
chorionic membrane mesenchymal stem cell | 8.65e-11 | 3 |
central nervous system pericyte | 6.28e-08 | 2 |
amniotic epithelial cell | 1.19e-07 | 2 |
amnion mesenchymal stem cell | 5.33e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 8.32e-33 | 14 |
membranous layer | 8.32e-33 | 14 |
extraembryonic structure | 6.95e-25 | 24 |
chorion | 4.57e-23 | 7 |
placenta | 5.17e-14 | 4 |
allantois | 5.17e-14 | 4 |
amnion | 2.61e-12 | 7 |
egg chorion | 8.65e-11 | 3 |
somatic layer of lateral plate mesoderm | 1.01e-10 | 8 |
cardiac chamber | 5.91e-10 | 3 |
cardiac atrium | 4.26e-07 | 2 |
future cardiac atrium | 4.26e-07 | 2 |
organ component layer | 7.61e-07 | 66 |