FFCP PHASE1:Mm9::chr13:52692289..52692308,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20963 | |EntrezGene=20963 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=512 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-19bp_to_ENSMUST00000140339_5end | |association_with_transcript=-19bp_to_ENSMUST00000140339_5end | ||
|cluster_id=chr13:52692289..52692308,+ | |||
|description=CAGE_peak_6_at_Syk_5end | |description=CAGE_peak_6_at_Syk_5end | ||
|id=chr13:52692289..52692308,+ | |id=chr13:52692289..52692308,+ | ||
|ontology_enrichment_celltype=CL:0000049!2.54e-08!19 | |ontology_enrichment_celltype=CL:0000049!2.54e-08!19 | ||
|ontology_enrichment_celltype_v019_2=CL:0000049,3.95e-20,19;CL:0000988,7.17e-16,32;CL:0002032,7.17e-16,32;CL:0000037,7.17e-16,32;CL:0000837,7.17e-16,32;CL:0000763,4.10e-15,16;CL:0002320,5.38e-14,46;CL:0000134,5.38e-14,46;CL:0000557,1.48e-12,7;CL:0000219,4.25e-11,54;CL:0000839,7.96e-11,13;CL:0002031,6.00e-09,25;CL:0000553,2.48e-08,6;CL:0000556,2.48e-08,6;CL:0002194,5.55e-08,4;CL:0000766,5.55e-08,4;CL:0000234,5.55e-08,4;CL:0000576,5.55e-08,4;CL:0000235,5.55e-08,4;CL:0000864,5.55e-08,4;CL:0002009,5.55e-08,4;CL:0000040,5.55e-08,4;CL:0000559,5.55e-08,4;CL:0000034,1.90e-07,97;CL:0002092,8.29e-07,3;CL:0002540,8.29e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.33e-13!48;UBERON:0002390!7.74e-12!45;UBERON:0003061!7.74e-12!45;UBERON:0002371!1.60e-11!16;UBERON:0001474!1.32e-10!22;UBERON:0004765!1.32e-10!22;UBERON:0001434!1.32e-10!22;UBERON:0002405!4.46e-10!70;UBERON:0002204!6.72e-09!32;UBERON:0003081!7.31e-07!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.36e-24,16;UBERON:0002193,3.29e-24,48;UBERON:0002405,3.29e-24,48;UBERON:0002390,4.04e-20,45;UBERON:0003061,4.04e-20,45;UBERON:0001474,4.48e-19,22;UBERON:0004765,4.48e-19,22;UBERON:0001434,4.48e-19,22;UBERON:0002204,4.08e-15,32;UBERON:0002384,5.38e-14,46;UBERON:0003081,7.99e-10,87;UBERON:0002106,2.29e-07,6;UBERON:0004457,2.29e-07,6;UBERON:0000042,2.29e-07,6;UBERON:0004854,2.29e-07,6;UBERON:0009034,2.29e-07,6;UBERON:0002095,2.29e-07,6;UBERON:0004782,2.29e-07,6;UBERON:0003281,2.29e-07,6;UBERON:0009664,2.29e-07,6;UBERON:0002296,2.29e-07,6;UBERON:0005602,2.29e-07,6;UBERON:0001179,2.29e-07,6;UBERON:0006293,2.29e-07,6 | |||
|phase1_expression=0,0,0.454999239389536,0,0,0,0.233612640595526,0,0,0,0,0,0,0,1.99865857089398,3.03712901084739,0.699561878128147,10.2525203741427,10.5578113876419,11.0341309467488,0.340173160604279,9.63122226648587,7.31359409589019,3.83981814704176,3.67054849707472,0.57423196411502,1.29228598847722,0.430942465371778,0,0,0,0,0,0,0,0,0,2.09265815368454,0.7813353445238,1.57057123192139,9.41170380849623,4.78131839470912,0.971020706062307,0,0,0,0,0,0,0,0,0,8.22134769682908,0,0,0.257259436035947,0.286533439938757,0,0,0,0,0,0,5.39939830368839,8.89979726310277,8.5257613793532,1.79760066311043,1.15265491596466,0,0.135005938331691,0,0,0.220868540951614,0.122490799214954,0.0958454710182364,0,0,0.127687338085188,0.153606533256243,0.131886287730194,0,0,0.558365998002762,0,0,0,0.142371680799103,0.186399445825301,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.34255163915718,6.99132285847364,0.29688427812965,0,0,0.230615497256059,0.150722640552623,0.352766121407114,0.251333182659351,0,1.73519228303894,1.76922110389975,0.323533699894818,0.662524555381181,0.969750506270444,0,0.292780797011547,0,0.766371165625774,10.4239158320151,7.7987355029143,7.11593271609162,0.299581278809645,0.915001205637253,0,0,0,0,0.162241263067758,0.101839363850316,1.24406970610093,0,0.210441855886474,0.130120442962704,0,0,0,0,0,0.187403449119458,0,0,0,0,0.219195732427575,0.278047249225598,0,0.61734640922383,0,4.91549231119264,4.63226232806487,1.98914449576915,0,0.234526059981096,0.36012412292203,0,0,0.154267112887378,0,0,0,0,0,0.162137619091711,0.292399974850665,0.439100230582101,0.268412837520744,0.420579897128254,0.102904612379284,0,0,0,0,0.128867461322093,0,0.444756087689741,0.190225626112559,0.949058123089023,0,0,0.198956472041151,0,0,0.432276099749388,0.398282546508734,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0,0,0,0,0,0.296452627087149,0.333690211432188,0.393117990226406,0.674586337154561,0.405720242777006,0.964708639009667,0.50925170356284,0.575392274901621,0.162135226775035,0,0,0.372140947668503,0,0,0,0.482443521363367,2.03228509183265,0.189491411770485,0,0.169745085775188,0,0.167506257441816,0,0.585400943573396,0.315270288212382,0.221464689648775,0.318909537314974,0.655453258862952,0.518054945597687,0.867894351489069,22.6186925908908,35.3538694482161,0,0.551873492609465,0.321101179975584,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0.325773918707152,0.329940245945071,1.32745138339963,0.242780636154981,0,0,0,0,0,0,1.42598951353889,0.632073515871632,0,1.03135543248187,0,0,0.129358683782755,0,0,0,0.164549020602121,0.304464949114599,0,0,0,0.16488625294148,0.484393280087717,0.0603129249281559,0,0,0.582961673259701,0,4.95525554313773,1.44470807574256,2.40752885580625,0.753473828018764,2.1871076435364,3.20289442489132,11.728511669576,13.7152423277185,11.746997773376,0,0.158167996790568,0.406638934253697,0.540026704109006,0.209088296014469,0,0,0.165306911450672,0.26175594198403,0.518459893167171,0,0,0,0,0,0.129159823477731,0.168956125490778,0,0,0.209718688851422,0,0,1.58005560314089,2.63542779877213,2.15693010046137,1.81889152168913,1.9692936523423,0.198681354781265,0.721172697119813,0.738447635872886,0.504832249740738,0.838274873204998,0.504130925684203,0.877120926657772,0.192423683280659,0.467507608726276,0.226730383615211,0,0,0,0,0.563047426353546,0.549454872801795,0.214368379079066,0.501572104035363,0.564751842617067,0,0,0,0,0,0,0.900642406448441,0,1.03552062350364,0,0,0.341467211508268,0,0.209613162627982,0.551530525350042,0,0.412070114477788,0.64183841918363,0,0.25347929989024,0.188626341386076,0.37456602987953,0.256100609619477,0.17230640686684,0.476293691283074,0.115884325944855,0,0,0,0.342869252385415,0,0.238436189947321,0.290692833264657,0.282328141245992,0.338458431566706,0,0.263069711437843,0.271608227691724,0.561142271657738,0.118635018124174,0.197008964751127,0,0,0.192906610981141,0,0.467863216890817,0.214871054048298,0.57386499620653,0.441182838239031,0.463735671240843 | |phase1_expression=0,0,0.454999239389536,0,0,0,0.233612640595526,0,0,0,0,0,0,0,1.99865857089398,3.03712901084739,0.699561878128147,10.2525203741427,10.5578113876419,11.0341309467488,0.340173160604279,9.63122226648587,7.31359409589019,3.83981814704176,3.67054849707472,0.57423196411502,1.29228598847722,0.430942465371778,0,0,0,0,0,0,0,0,0,2.09265815368454,0.7813353445238,1.57057123192139,9.41170380849623,4.78131839470912,0.971020706062307,0,0,0,0,0,0,0,0,0,8.22134769682908,0,0,0.257259436035947,0.286533439938757,0,0,0,0,0,0,5.39939830368839,8.89979726310277,8.5257613793532,1.79760066311043,1.15265491596466,0,0.135005938331691,0,0,0.220868540951614,0.122490799214954,0.0958454710182364,0,0,0.127687338085188,0.153606533256243,0.131886287730194,0,0,0.558365998002762,0,0,0,0.142371680799103,0.186399445825301,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.34255163915718,6.99132285847364,0.29688427812965,0,0,0.230615497256059,0.150722640552623,0.352766121407114,0.251333182659351,0,1.73519228303894,1.76922110389975,0.323533699894818,0.662524555381181,0.969750506270444,0,0.292780797011547,0,0.766371165625774,10.4239158320151,7.7987355029143,7.11593271609162,0.299581278809645,0.915001205637253,0,0,0,0,0.162241263067758,0.101839363850316,1.24406970610093,0,0.210441855886474,0.130120442962704,0,0,0,0,0,0.187403449119458,0,0,0,0,0.219195732427575,0.278047249225598,0,0.61734640922383,0,4.91549231119264,4.63226232806487,1.98914449576915,0,0.234526059981096,0.36012412292203,0,0,0.154267112887378,0,0,0,0,0,0.162137619091711,0.292399974850665,0.439100230582101,0.268412837520744,0.420579897128254,0.102904612379284,0,0,0,0,0.128867461322093,0,0.444756087689741,0.190225626112559,0.949058123089023,0,0,0.198956472041151,0,0,0.432276099749388,0.398282546508734,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0,0,0,0,0,0.296452627087149,0.333690211432188,0.393117990226406,0.674586337154561,0.405720242777006,0.964708639009667,0.50925170356284,0.575392274901621,0.162135226775035,0,0,0.372140947668503,0,0,0,0.482443521363367,2.03228509183265,0.189491411770485,0,0.169745085775188,0,0.167506257441816,0,0.585400943573396,0.315270288212382,0.221464689648775,0.318909537314974,0.655453258862952,0.518054945597687,0.867894351489069,22.6186925908908,35.3538694482161,0,0.551873492609465,0.321101179975584,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0.325773918707152,0.329940245945071,1.32745138339963,0.242780636154981,0,0,0,0,0,0,1.42598951353889,0.632073515871632,0,1.03135543248187,0,0,0.129358683782755,0,0,0,0.164549020602121,0.304464949114599,0,0,0,0.16488625294148,0.484393280087717,0.0603129249281559,0,0,0.582961673259701,0,4.95525554313773,1.44470807574256,2.40752885580625,0.753473828018764,2.1871076435364,3.20289442489132,11.728511669576,13.7152423277185,11.746997773376,0,0.158167996790568,0.406638934253697,0.540026704109006,0.209088296014469,0,0,0.165306911450672,0.26175594198403,0.518459893167171,0,0,0,0,0,0.129159823477731,0.168956125490778,0,0,0.209718688851422,0,0,1.58005560314089,2.63542779877213,2.15693010046137,1.81889152168913,1.9692936523423,0.198681354781265,0.721172697119813,0.738447635872886,0.504832249740738,0.838274873204998,0.504130925684203,0.877120926657772,0.192423683280659,0.467507608726276,0.226730383615211,0,0,0,0,0.563047426353546,0.549454872801795,0.214368379079066,0.501572104035363,0.564751842617067,0,0,0,0,0,0,0.900642406448441,0,1.03552062350364,0,0,0.341467211508268,0,0.209613162627982,0.551530525350042,0,0.412070114477788,0.64183841918363,0,0.25347929989024,0.188626341386076,0.37456602987953,0.256100609619477,0.17230640686684,0.476293691283074,0.115884325944855,0,0,0,0.342869252385415,0,0.238436189947321,0.290692833264657,0.282328141245992,0.338458431566706,0,0.263069711437843,0.271608227691724,0.561142271657738,0.118635018124174,0.197008964751127,0,0,0.192906610981141,0,0.467863216890817,0.214871054048298,0.57386499620653,0.441182838239031,0.463735671240843 | ||
|short_description=p6@Syk | |short_description=p6@Syk | ||
}} | }} |
Latest revision as of 17:40, 1 October 2015
Short description: | p6@Syk |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Syk_5end |
Coexpression cluster: | MCL_coexpression_mm9:512 |
Association with transcript: | -19bp_to_ENSMUST00000140339_5end |
EntrezGene: | Syk |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 3.95e-20 | 19 |
hematopoietic cell | 7.17e-16 | 32 |
hematopoietic oligopotent progenitor cell | 7.17e-16 | 32 |
hematopoietic stem cell | 7.17e-16 | 32 |
hematopoietic multipotent progenitor cell | 7.17e-16 | 32 |
myeloid cell | 4.10e-15 | 16 |
connective tissue cell | 5.38e-14 | 46 |
mesenchymal cell | 5.38e-14 | 46 |
granulocyte monocyte progenitor cell | 1.48e-12 | 7 |
motile cell | 4.25e-11 | 54 |
myeloid lineage restricted progenitor cell | 7.96e-11 | 13 |
hematopoietic lineage restricted progenitor cell | 6.00e-09 | 25 |
megakaryocyte progenitor cell | 2.48e-08 | 6 |
megakaryocyte | 2.48e-08 | 6 |
monopoietic cell | 5.55e-08 | 4 |
myeloid leukocyte | 5.55e-08 | 4 |
phagocyte | 5.55e-08 | 4 |
monocyte | 5.55e-08 | 4 |
macrophage | 5.55e-08 | 4 |
tissue-resident macrophage | 5.55e-08 | 4 |
macrophage dendritic cell progenitor | 5.55e-08 | 4 |
monoblast | 5.55e-08 | 4 |
promonocyte | 5.55e-08 | 4 |
stem cell | 1.90e-07 | 97 |
bone marrow cell | 8.29e-07 | 3 |
mesenchymal stem cell of the bone marrow | 8.29e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.36e-24 | 16 |
hemolymphoid system | 3.29e-24 | 48 |
immune system | 3.29e-24 | 48 |
hematopoietic system | 4.04e-20 | 45 |
blood island | 4.04e-20 | 45 |
bone element | 4.48e-19 | 22 |
skeletal element | 4.48e-19 | 22 |
skeletal system | 4.48e-19 | 22 |
musculoskeletal system | 4.08e-15 | 32 |
connective tissue | 5.38e-14 | 46 |
lateral plate mesoderm | 7.99e-10 | 87 |
spleen | 2.29e-07 | 6 |
cavity lining | 2.29e-07 | 6 |
serous membrane | 2.29e-07 | 6 |
gastrointestinal system mesentery | 2.29e-07 | 6 |
stomach region | 2.29e-07 | 6 |
mesentery | 2.29e-07 | 6 |
gastrointestinal system serosa | 2.29e-07 | 6 |
mesentery of stomach | 2.29e-07 | 6 |
gut mesentery | 2.29e-07 | 6 |
dorsal mesentery | 2.29e-07 | 6 |
dorsal mesogastrium | 2.29e-07 | 6 |
peritoneal cavity | 2.29e-07 | 6 |
spleen primordium | 2.29e-07 | 6 |