FFCP PHASE1:Mm9::chr17:57201740..57201760,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=224912 | |EntrezGene=224912 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=Q8QZT4 | |UniProt=Q8QZT4 | ||
|association_with_transcript=18bp_to_ENSMUST00000163763_5end | |association_with_transcript=18bp_to_ENSMUST00000163763_5end | ||
|cluster_id=chr17:57201740..57201760,+ | |||
|description=CAGE_peak_4_at_Crb3_5end | |description=CAGE_peak_4_at_Crb3_5end | ||
|id=chr17:57201740..57201760,+ | |id=chr17:57201740..57201760,+ | ||
|ontology_enrichment_celltype=CL:0000066!5.08e-09!25;CL:0000223!1.89e-07!20;CL:0002563!3.30e-07!9;CL:0002251!3.30e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.05e-14,25;CL:0000239,1.40e-12,6;CL:0000677,1.40e-12,6;CL:0000584,1.40e-12,6;CL:0000223,1.08e-11,20;CL:0000075,1.21e-10,7;CL:0002563,2.00e-10,9;CL:0002251,2.00e-10,9;CL:0002076,2.85e-09,15;CL:0000682,3.38e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!3.84e-19!59;UBERON:0000160!6.24e-19!43;UBERON:0004119!9.28e-19!130;UBERON:0000925!9.28e-19!130;UBERON:0006595!9.28e-19!130;UBERON:0001007!5.43e-18!128;UBERON:0001555!5.43e-18!128;UBERON:0007026!5.43e-18!128;UBERON:0004921!1.21e-16!126;UBERON:0004185!1.21e-16!126;UBERON:0000344!4.94e-12!15;UBERON:0001242!2.02e-10!13;UBERON:0000060!2.02e-10!13;UBERON:0001262!2.02e-10!13;UBERON:0004786!2.02e-10!13;UBERON:0004923!9.34e-08!24;UBERON:0003350!3.30e-07!9;UBERON:0004808!3.30e-07!9;UBERON:0001277!3.30e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.21e-30,31;UBERON:0005409,2.46e-29,47;UBERON:0000344,2.90e-21,15;UBERON:0004119,5.58e-19,118;UBERON:0000925,5.58e-19,118;UBERON:0006595,5.58e-19,118;UBERON:0001007,2.34e-18,116;UBERON:0001555,2.34e-18,116;UBERON:0007026,2.34e-18,116;UBERON:0001242,1.35e-17,13;UBERON:0001262,1.35e-17,13;UBERON:0004786,1.35e-17,13;UBERON:0004921,3.49e-16,114;UBERON:0004923,1.13e-15,24;UBERON:0003350,2.00e-10,9;UBERON:0004808,2.00e-10,9;UBERON:0001277,2.00e-10,9;UBERON:0002108,1.28e-08,4;UBERON:0000485,2.69e-08,11;UBERON:0000331,3.22e-07,3;UBERON:0002116,3.22e-07,3;UBERON:0001204,3.22e-07,3;UBERON:0001168,3.22e-07,3 | |||
|phase1_expression=0,10.4692622291808,10.9199817453489,6.0492842261366,9.5170188689806,3.86122325397347,2.33612640595526,0,0.281577444303333,0,0,0,0,0,0,0,0,0,0,0.42438965179803,0.510259740906419,0,0,5.11975752938901,8.02932483735095,10.9104073181854,4.30761996159075,6.89507944594845,8.36103045608045,5.54466285471848,7.31710685162506,0,0,0,0.288851619751275,1.32987716286794,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31891590961342,0,4.0798280022465,1.61910957491345,0,0.448026887097336,0.561777680527007,0,0,0,0.281686839553361,0,0,0,2.16491041011214,1.77351905832569,0.505524445014783,1.82694207550496,0,0,0,0,0,0,0.117588707135705,0,1.48316980640624,0,0,0,0,0,3.72783522436244,0.292780797011547,0.209446706813455,4.08731288333746,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0.252722758433675,0.420883711772948,0,0,0,0,0.0680364991513279,0,0,0,0.215567992932842,0.189106080167819,0,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0.210289948564127,0.102904612379284,6.27795687669216,4.23120906661671,0,0,1.15980715189884,0.80673409849337,0.889512175379481,1.52180500890047,2.37264530772256,1.31759163779209,1.50801125280162,0.994782360205754,1.36474860983384,1.79763881730844,1.29682829924817,1.7922714592893,0.569003702859245,0.456994050438915,0,0.407302655690628,0.193952487167626,0.420814919341911,0.758838445491087,0.590440591918409,0.470996183524124,0.493588655687202,0.296452627087149,0,0,0,0.405720242777006,0.241177159752417,0.50925170356284,0,0.810676133875177,0,0,0,0.312037673114561,0.252578877947112,0.179397413521912,0.482443521363367,0,0.189491411770485,0.162964976442026,0.509235257325564,0.469380496577004,0.502518772325447,1.19021820443007,2.14647012643579,0.472905432318573,0.664394068946325,0.478364305972461,0.491589944147214,0.345369963731791,0.144649058581512,0,0,0.491764273019036,0.275936746304732,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.35613120733451,0.325773918707152,0,0,0.242780636154981,0.302323556964751,0.377210159511796,1.47650946440386,1.53717573971964,0.775284879504663,0.727067458955011,0.712994756769443,0.948110273807448,0,0,0,0.18006109403131,0.517434735131018,0.214337035031592,0,0,0.164549020602121,0,0.23467170806371,1.0591603543191,0.220528398054962,0.65954501176592,0,0.180938774784468,0.358117032009409,0.492422699235184,1.7488850197791,0,0,0,0,0,0,0,0,0,0.138199973804424,1.90934123603023,0,0.609958401380546,0.648032044930808,1.67270636811575,1.52853794622324,0.944050424693745,1.32245529160537,2.6175594198403,4.53652406521275,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,1.36038230169127,0.221985953374065,0,0,0.386379188064381,0.375364950902364,0.549454872801795,2.35805216986972,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0,0,0,0,0.505394423527595,0.50695859978048,0.188626341386076,0.0936415074698824,0.128050304809739,0,0.476293691283074,0.231768651889711,0.38581844092741,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0.145346416632329,0.0941093804153306,0.25384382367503,0.365855945745545,0,0,0,0.355905054372522,0.0985044823755635,0.409231043169689,0,0.192906610981141,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,10.4692622291808,10.9199817453489,6.0492842261366,9.5170188689806,3.86122325397347,2.33612640595526,0,0.281577444303333,0,0,0,0,0,0,0,0,0,0,0.42438965179803,0.510259740906419,0,0,5.11975752938901,8.02932483735095,10.9104073181854,4.30761996159075,6.89507944594845,8.36103045608045,5.54466285471848,7.31710685162506,0,0,0,0.288851619751275,1.32987716286794,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31891590961342,0,4.0798280022465,1.61910957491345,0,0.448026887097336,0.561777680527007,0,0,0,0.281686839553361,0,0,0,2.16491041011214,1.77351905832569,0.505524445014783,1.82694207550496,0,0,0,0,0,0,0.117588707135705,0,1.48316980640624,0,0,0,0,0,3.72783522436244,0.292780797011547,0.209446706813455,4.08731288333746,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0.252722758433675,0.420883711772948,0,0,0,0,0.0680364991513279,0,0,0,0.215567992932842,0.189106080167819,0,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0.210289948564127,0.102904612379284,6.27795687669216,4.23120906661671,0,0,1.15980715189884,0.80673409849337,0.889512175379481,1.52180500890047,2.37264530772256,1.31759163779209,1.50801125280162,0.994782360205754,1.36474860983384,1.79763881730844,1.29682829924817,1.7922714592893,0.569003702859245,0.456994050438915,0,0.407302655690628,0.193952487167626,0.420814919341911,0.758838445491087,0.590440591918409,0.470996183524124,0.493588655687202,0.296452627087149,0,0,0,0.405720242777006,0.241177159752417,0.50925170356284,0,0.810676133875177,0,0,0,0.312037673114561,0.252578877947112,0.179397413521912,0.482443521363367,0,0.189491411770485,0.162964976442026,0.509235257325564,0.469380496577004,0.502518772325447,1.19021820443007,2.14647012643579,0.472905432318573,0.664394068946325,0.478364305972461,0.491589944147214,0.345369963731791,0.144649058581512,0,0,0.491764273019036,0.275936746304732,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.35613120733451,0.325773918707152,0,0,0.242780636154981,0.302323556964751,0.377210159511796,1.47650946440386,1.53717573971964,0.775284879504663,0.727067458955011,0.712994756769443,0.948110273807448,0,0,0,0.18006109403131,0.517434735131018,0.214337035031592,0,0,0.164549020602121,0,0.23467170806371,1.0591603543191,0.220528398054962,0.65954501176592,0,0.180938774784468,0.358117032009409,0.492422699235184,1.7488850197791,0,0,0,0,0,0,0,0,0,0.138199973804424,1.90934123603023,0,0.609958401380546,0.648032044930808,1.67270636811575,1.52853794622324,0.944050424693745,1.32245529160537,2.6175594198403,4.53652406521275,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,1.36038230169127,0.221985953374065,0,0,0.386379188064381,0.375364950902364,0.549454872801795,2.35805216986972,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0,0,0,0,0.505394423527595,0.50695859978048,0.188626341386076,0.0936415074698824,0.128050304809739,0,0.476293691283074,0.231768651889711,0.38581844092741,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0.145346416632329,0.0941093804153306,0.25384382367503,0.365855945745545,0,0,0,0.355905054372522,0.0985044823755635,0.409231043169689,0,0.192906610981141,0,0,0.214871054048298,0,0,0 | ||
|short_description=p4@Crb3 | |short_description=p4@Crb3 | ||
}} | }} |
Latest revision as of 17:36, 26 September 2015
Short description: | p4@Crb3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Crb3_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 18bp_to_ENSMUST00000163763_5end |
EntrezGene: | Crb3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.05e-14 | 25 |
brush border epithelial cell | 1.40e-12 | 6 |
gut absorptive cell | 1.40e-12 | 6 |
enterocyte | 1.40e-12 | 6 |
endodermal cell | 1.08e-11 | 20 |
columnar/cuboidal epithelial cell | 1.21e-10 | 7 |
intestinal epithelial cell | 2.00e-10 | 9 |
epithelial cell of alimentary canal | 2.00e-10 | 9 |
endo-epithelial cell | 2.85e-09 | 15 |
M cell of gut | 3.38e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.21e-30 | 31 |
gastrointestinal system | 2.46e-29 | 47 |
mucosa | 2.90e-21 | 15 |
endoderm-derived structure | 5.58e-19 | 118 |
endoderm | 5.58e-19 | 118 |
presumptive endoderm | 5.58e-19 | 118 |
digestive system | 2.34e-18 | 116 |
digestive tract | 2.34e-18 | 116 |
primitive gut | 2.34e-18 | 116 |
intestinal mucosa | 1.35e-17 | 13 |
wall of intestine | 1.35e-17 | 13 |
gastrointestinal system mucosa | 1.35e-17 | 13 |
subdivision of digestive tract | 3.49e-16 | 114 |
organ component layer | 1.13e-15 | 24 |
epithelium of mucosa | 2.00e-10 | 9 |
gastrointestinal system epithelium | 2.00e-10 | 9 |
intestinal epithelium | 2.00e-10 | 9 |
small intestine | 1.28e-08 | 4 |
simple columnar epithelium | 2.69e-08 | 11 |
ileal mucosa | 3.22e-07 | 3 |
ileum | 3.22e-07 | 3 |
mucosa of small intestine | 3.22e-07 | 3 |
wall of small intestine | 3.22e-07 | 3 |