FFCP PHASE1:Hg19::chr11:16419067..16419077,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55553 | |EntrezGene=55553 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16421 | |HGNC=16421 | ||
|TSSclassifier=strong | |||
|UniProt=E9PQL4 | |UniProt=E9PQL4 | ||
|association_with_transcript=30bp_to_ENST00000533411_5end | |association_with_transcript=30bp_to_ENST00000533411_5end | ||
|cluster_id=chr11:16419067..16419077,- | |||
|coexpression_cluster_id=C211 | |||
|description=CAGE_peak_23_at_SOX6_5end | |description=CAGE_peak_23_at_SOX6_5end | ||
|id=chr11:16419067..16419077,- | |id=chr11:16419067..16419077,- | ||
|ontology_enrichment_celltype=CL:0000181!2.00e-10!12;CL:0000417!2.00e-10!12;CL:0000668!2.00e-10!12;CL:0000414!2.00e-10!12;CL:0000412!2.00e-10!12;CL:0000182!2.00e-10!12 | |ontology_enrichment_celltype=CL:0000181!2.00e-10!12;CL:0000417!2.00e-10!12;CL:0000668!2.00e-10!12;CL:0000414!2.00e-10!12;CL:0000412!2.00e-10!12;CL:0000182!2.00e-10!12 | ||
|ontology_enrichment_celltype_v019=CL:0002535;2.07e-12;2!CL:0000182;2.46e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,2.32e-12,2;CL:0000182,2.55e-08,12 | |||
|ontology_enrichment_development_v019=UBERON:0007297;3.06e-12;2!UBERON:0003918;7.74e-10;10!UBERON:0007687;7.74e-10;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!1.00e-10!55;UBERON:0005173!1.00e-10!55;UBERON:0009854!1.03e-09!23;UBERON:0002417!1.96e-09!61;UBERON:0000916!1.96e-09!61;UBERON:0002107!6.14e-09!19;UBERON:0006925!6.14e-09!19;UBERON:0008836!6.14e-09!19;UBERON:0009497!6.26e-09!25;UBERON:0000015!6.26e-09!25;UBERON:0002423!6.26e-09!25;UBERON:0006235!6.26e-09!25;UBERON:0004161!6.26e-09!25;UBERON:0009856!1.73e-08!26;UBERON:0000160!5.83e-08!27;UBERON:0008835!1.23e-07!22;UBERON:0003894!1.23e-07!22;UBERON:0003135!2.54e-07!11;UBERON:0004921!2.66e-07!129;UBERON:0004185!2.66e-07!129;UBERON:0005177!2.95e-07!107 | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;4.59e-23;1!UBERON:0006955;2.07e-12;2!UBERON:0004801;2.07e-12;2!UBERON:0006947;1.35e-08;3!UBERON:0004054;1.35e-08;3!UBERON:0005904;9.36e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,3.28e-23,1;UBERON:0006955,2.32e-12,2;UBERON:0004801,2.32e-12,2;UBERON:0005172,2.08e-10,54;UBERON:0005173,2.08e-10,54;UBERON:0002417,2.21e-09,60;UBERON:0000916,2.21e-09,60;UBERON:0006947,1.21e-08,3;UBERON:0004054,1.21e-08,3;UBERON:0002113,2.59e-08,26;UBERON:0003918,2.59e-08,26;UBERON:0011143,2.59e-08,26;UBERON:0005095,2.59e-08,26;UBERON:0007687,2.59e-08,26;UBERON:0000489,4.58e-07,31;UBERON:0005904,8.61e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,0.982827216677626,1.18157981336281,0,0.491953754172454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,2.01546198283421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,1.41532103205343,0.611030144933625,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0.853828638089378,0,0,0,0,1.57254001417827,0,0,0,0,0,0,0,0,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236349546921671,0,0,0.492137407573744,0,0,0,0,0,0,0,0,0,0,2.60058834087354,2.15063811353492,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0.342173675768659,0,0,0.157204305099666,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371807292777007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647782773655864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243835849964539,0,0,0,0,0,0,0,0,0,0,3.00979216620984,0.655678681511872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0.267964130156178,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,0.982827216677626,1.18157981336281,0,0.491953754172454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,2.01546198283421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,1.41532103205343,0.611030144933625,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0.853828638089378,0,0,0,0,1.57254001417827,0,0,0,0,0,0,0,0,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236349546921671,0,0,0.492137407573744,0,0,0,0,0,0,0,0,0,0,2.60058834087354,2.15063811353492,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0.342173675768659,0,0,0.157204305099666,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371807292777007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647782773655864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243835849964539,0,0,0,0,0,0,0,0,0,0,3.00979216620984,0.655678681511872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0.267964130156178,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p23@SOX6 | |short_description=p23@SOX6 | ||
}} | }} |
Latest revision as of 23:02, 16 September 2015
Short description: | p23@SOX6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_SOX6_5end |
Coexpression cluster: | C211_small_Hepatocyte_liver_colon_temporal_duodenum_kidney |
Association with transcript: | 30bp_to_ENST00000533411_5end |
EntrezGene: | SOX6 |
HGNC: | 16421 |
UniProt: | E9PQL4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 2.32e-12 | 2 |
hepatocyte | 2.55e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
epididymis | 3.28e-23 | 1 |
uterine epithelium | 2.32e-12 | 2 |
cervix epithelium | 2.32e-12 | 2 |
abdomen element | 2.08e-10 | 54 |
abdominal segment element | 2.08e-10 | 54 |
abdominal segment of trunk | 2.21e-09 | 60 |
abdomen | 2.21e-09 | 60 |
male genital duct | 1.21e-08 | 3 |
internal male genitalia | 1.21e-08 | 3 |
kidney | 2.59e-08 | 26 |
kidney mesenchyme | 2.59e-08 | 26 |
upper urinary tract | 2.59e-08 | 26 |
kidney rudiment | 2.59e-08 | 26 |
kidney field | 2.59e-08 | 26 |
cavitated compound organ | 4.58e-07 | 31 |
duct of male reproductive system | 8.61e-07 | 4 |