FFCP PHASE1:Hg19::chr11:128344618..128344625,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:128344618..128344625,- | |||
|coexpression_cluster_id=C476 | |||
|description=CAGE_peak_at_chr11:128344618..128344625,- | |description=CAGE_peak_at_chr11:128344618..128344625,- | ||
|id=chr11:128344618..128344625,- | |id=chr11:128344618..128344625,- | ||
|ontology_enrichment_celltype=CL:0000084!1.39e-36!25;CL:0000827!1.39e-36!25;CL:0000791!5.87e-32!18;CL:0000789!5.87e-32!18;CL:0002420!5.87e-32!18;CL:0002419!5.87e-32!18;CL:0000790!5.87e-32!18;CL:0000625!3.25e-28!11;CL:0000542!9.27e-28!53;CL:0000051!9.27e-28!53;CL:0000838!6.03e-26!52;CL:0002087!6.88e-13!119;CL:0000080!3.63e-12!6;CL:0000738!6.80e-12!140;CL:0000842!1.38e-09!3;CL:0000988!5.49e-09!182;CL:0000624!2.28e-08!6;CL:0000037!2.37e-08!172;CL:0000566!2.37e-08!172;CL:0002031!3.40e-08!124;CL:0000224!2.75e-07!4 | |ontology_enrichment_celltype=CL:0000084!1.39e-36!25;CL:0000827!1.39e-36!25;CL:0000791!5.87e-32!18;CL:0000789!5.87e-32!18;CL:0002420!5.87e-32!18;CL:0002419!5.87e-32!18;CL:0000790!5.87e-32!18;CL:0000625!3.25e-28!11;CL:0000542!9.27e-28!53;CL:0000051!9.27e-28!53;CL:0000838!6.03e-26!52;CL:0002087!6.88e-13!119;CL:0000080!3.63e-12!6;CL:0000738!6.80e-12!140;CL:0000842!1.38e-09!3;CL:0000988!5.49e-09!182;CL:0000624!2.28e-08!6;CL:0000037!2.37e-08!172;CL:0000566!2.37e-08!172;CL:0002031!3.40e-08!124;CL:0000224!2.75e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000625;5.35e-43;11!CL:0000791;3.09e-26;18!CL:0000789;3.09e-26;18!CL:0002419;3.09e-26;18!CL:0000084;7.72e-19;25!CL:0000785;2.41e-14;1!CL:0000819;2.41e-14;1!CL:0000542;5.37e-09;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,4.62e-43,11;CL:0000791,2.83e-26,18;CL:0000789,2.83e-26,18;CL:0002420,2.83e-26,18;CL:0002419,2.83e-26,18;CL:0000790,2.83e-26,18;CL:0000084,7.25e-19,25;CL:0000827,7.25e-19,25;CL:0000838,1.31e-15,52;CL:0000542,2.67e-15,53;CL:0000051,2.67e-15,53;CL:0000819,2.11e-14,1;CL:0002087,2.74e-08,115;CL:0000785,7.52e-08,2;CL:0000955,7.52e-08,2;CL:0000818,7.52e-08,2;CL:0000954,7.52e-08,2;CL:0000816,7.52e-08,2;CL:0000738,7.35e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000790;3.09e-26;18!CL:0000051;5.37e-09;53!CL:0000954;8.04e-08;2 | |||
|ontology_enrichment_disease=DOID:0060058!1.36e-10!10 | |||
|ontology_enrichment_disease_v019=DOID:0060073;2.41e-14;1!DOID:8675;2.41e-14;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,2.11e-14,1;DOID:8675,2.11e-14,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!9.67e-15!15;UBERON:0000179!9.67e-15!15;UBERON:0000463!9.67e-15!15;UBERON:0004177!4.14e-11!7;UBERON:0002370!5.15e-08!4;UBERON:0005058!5.15e-08!4;UBERON:0009113!5.15e-08!4;UBERON:0003295!5.15e-08!4;UBERON:0005562!5.15e-08!4;UBERON:0006562!8.86e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;3.14e-28;2!UBERON:0005058;3.14e-28;2!UBERON:0009113;3.14e-28;2!UBERON:0004177;6.70e-12;5!UBERON:0005057;6.70e-12;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.23e-14,4;UBERON:0005058,1.23e-14,4;UBERON:0009113,1.23e-14,4;UBERON:0003295,1.23e-14,4;UBERON:0005562,1.23e-14,4;UBERON:0003351,4.54e-10,6;UBERON:0004177,9.33e-09,7;UBERON:0005057,9.33e-09,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0.0774672005803016,4.69158467208491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983548850569165,0,0.205601498999509,0,0.651844533267181,0.473447805734733,0,0.111410456885174,0,0,0,0.128091319725675,0.130059347559878,0,0.552700035571697,0.579606171470105,1.4828656316206,2.40786745280742,4.18142095219907,0.226618685395132,0.383220493601921,0,0.759059076058509,1.91139248594458,3.90650072313851,5.70271226669025,3.76437797694432,3.19966527886046,0,3.31488152861624,0.821127996921047,0.403213486449465,0.534880391567015,0.868946423296794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0.476463550915578,0.411362273086194,0,0,0.79312517629427,0,0,0,0.371606350251437,0,0.355709216742071,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494411622680279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0.417687798021821,0,0,0,1.64209310294099,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.375935671919414,0.322289439867886,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0.23806443146374,8.00902481966476,7.01444271543194,0,0,0.404234377916439,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0.805095174364105,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0.0774672005803016,4.69158467208491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983548850569165,0,0.205601498999509,0,0.651844533267181,0.473447805734733,0,0.111410456885174,0,0,0,0.128091319725675,0.130059347559878,0,0.552700035571697,0.579606171470105,1.4828656316206,2.40786745280742,4.18142095219907,0.226618685395132,0.383220493601921,0,0.759059076058509,1.91139248594458,3.90650072313851,5.70271226669025,3.76437797694432,3.19966527886046,0,3.31488152861624,0.821127996921047,0.403213486449465,0.534880391567015,0.868946423296794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0.476463550915578,0.411362273086194,0,0,0.79312517629427,0,0,0,0.371606350251437,0,0.355709216742071,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494411622680279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0.417687798021821,0,0,0,1.64209310294099,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.375935671919414,0.322289439867886,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0.23806443146374,8.00902481966476,7.01444271543194,0,0,0.404234377916439,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0.805095174364105,0 | ||
|short_description=p@chr11:128344618..128344625,- | |short_description=p@chr11:128344618..128344625,- | ||
}} | }} |
Latest revision as of 19:52, 23 July 2015
Short description: | p@chr11:128344618..128344625, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:128344618..128344625, - |
Coexpression cluster: | C476_thymus_acute_Hodgkin_CD4_CD8_chronic_vein |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 4.62e-43 | 11 |
mature alpha-beta T cell | 2.83e-26 | 18 |
alpha-beta T cell | 2.83e-26 | 18 |
immature T cell | 2.83e-26 | 18 |
mature T cell | 2.83e-26 | 18 |
immature alpha-beta T cell | 2.83e-26 | 18 |
T cell | 7.25e-19 | 25 |
pro-T cell | 7.25e-19 | 25 |
lymphoid lineage restricted progenitor cell | 1.31e-15 | 52 |
lymphocyte | 2.67e-15 | 53 |
common lymphoid progenitor | 2.67e-15 | 53 |
B-1 B cell | 2.11e-14 | 1 |
nongranular leukocyte | 2.74e-08 | 115 |
mature B cell | 7.52e-08 | 2 |
pre-B-II cell | 7.52e-08 | 2 |
transitional stage B cell | 7.52e-08 | 2 |
small pre-B-II cell | 7.52e-08 | 2 |
immature B cell | 7.52e-08 | 2 |
leukocyte | 7.35e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.23e-14 | 4 |
hemolymphoid system gland | 1.23e-14 | 4 |
thymic region | 1.23e-14 | 4 |
pharyngeal gland | 1.23e-14 | 4 |
thymus primordium | 1.23e-14 | 4 |
pharyngeal epithelium | 4.54e-10 | 6 |
hemopoietic organ | 9.33e-09 | 7 |
immune organ | 9.33e-09 | 7 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 2.11e-14 | 1 |
lymphosarcoma | 2.11e-14 | 1 |