FFCP PHASE1:Mm9::chr17:34404492..34404513,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14961 | |EntrezGene=14961 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=48 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=445bp_to_ENSMUST00000173103_5end | |association_with_transcript=445bp_to_ENSMUST00000173103_5end | ||
|cluster_id=chr17:34404492..34404513,+ | |||
|description=CAGE_peak_2_at_H2-Ab1_5end | |description=CAGE_peak_2_at_H2-Ab1_5end | ||
|id=chr17:34404492..34404513,+ | |id=chr17:34404492..34404513,+ | ||
|ontology_enrichment_celltype=CL:0000553!2.77e-07!6;CL:0000556!2.77e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,2.78e-12,6;CL:0000556,2.78e-12,6;CL:0002250,1.89e-09,3;CL:0000050,4.62e-08,9;CL:0002031,6.34e-08,25;CL:0000839,1.53e-07,13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.37e-14!48;UBERON:0002390!2.97e-12!45;UBERON:0003061!2.97e-12!45;UBERON:0002405!2.29e-09!70;UBERON:0002371!2.19e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,7.67e-11,15;UBERON:0001242,6.96e-10,13;UBERON:0001262,6.96e-10,13;UBERON:0004786,6.96e-10,13;UBERON:0004923,9.53e-10,24;UBERON:0002193,1.11e-09,48;UBERON:0002405,1.11e-09,48;UBERON:0002390,1.30e-07,45;UBERON:0003061,1.30e-07,45;UBERON:0002108,9.95e-07,4 | |||
|phase1_expression=0,0,0,1.20985684522732,0.500895729946347,0,0,0.129123323441576,0.281577444303333,0,0,0,0,0,1.33243904726265,2.42970320867791,0.699561878128147,31.5462165358238,23.5836825801871,22.0682618934976,0.0850432901510698,0,0.261199789138935,0.319984845586813,1.37645568640302,0,0,0,1.90023419456374,1.76421090831952,0.221730510655305,0,0,0,2.88851619751275,2.49351968037739,2.6542016314108,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,60.4017381807851,2.90144856804538,1.34437519656986,0,0,0,0,0,0,0,0,0.449949858640699,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0,0.279182999001381,0,0,0,0,0,0,0,0.289864488701678,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,3.10725460376606,1.1875371125186,0,0,0,0,0,0,0.247194967734374,0.289198713839823,0,0,0,0,0,0,0,4.34276993854605,0.838705871541442,0,0.508280908292259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51469581422943,0.568326998791185,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.28670052774077,0,0,0,0.128867461322093,0.403367049246685,0,0,0.474529061544512,0,0,0,0.19496408711912,0.898819408654221,0,0.398282546508734,0,0,0,0,0,0.0701358198903186,0,0.147610147979602,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,2.87536413054709,0,0,0,0.179397413521912,0,0.739012760666419,0,0,0,0,0,0,0,0.472905432318573,0,0.318909537314974,0.163863314715738,0.690739927463582,0.289298117163023,1.50791283939272,0.54390568381871,1.47529281905711,0.827810238914197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8244312647074,0,0,0,0.164140899745061,1.45740418314925,0.18542530201051,2.22132145037209,0,0,0.188368457004691,1.0935538217682,0,1.5298058699447,1.6794174278839,1.24379976423981,0.954670618015114,0,0,0,0,0,0.134864346384821,0.0826534557253359,0.26175594198403,0,0.621339313086926,0.56369293868419,0,0,0,0,0,0,0,0,0,0,1.89606672376907,0.608175645870493,0.205421914329655,1.29920822977795,1.25318686967237,1.39076948346885,0.600977247599844,1.18151621739662,0.302899349844443,0.457240839929999,0.403304740547362,0.974578807397524,0.962118416403295,0.701261413089414,0,0,0,0,0,0.375364950902364,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0,0,0,0,0,0,0,0.0574354689556133,0.476293691283074,0,0,0,0.294397840268795,0,0,0.238436189947321,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0.220591419119515,0.231867835620421 | |phase1_expression=0,0,0,1.20985684522732,0.500895729946347,0,0,0.129123323441576,0.281577444303333,0,0,0,0,0,1.33243904726265,2.42970320867791,0.699561878128147,31.5462165358238,23.5836825801871,22.0682618934976,0.0850432901510698,0,0.261199789138935,0.319984845586813,1.37645568640302,0,0,0,1.90023419456374,1.76421090831952,0.221730510655305,0,0,0,2.88851619751275,2.49351968037739,2.6542016314108,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,60.4017381807851,2.90144856804538,1.34437519656986,0,0,0,0,0,0,0,0,0.449949858640699,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0,0.279182999001381,0,0,0,0,0,0,0,0.289864488701678,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,3.10725460376606,1.1875371125186,0,0,0,0,0,0,0.247194967734374,0.289198713839823,0,0,0,0,0,0,0,4.34276993854605,0.838705871541442,0,0.508280908292259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51469581422943,0.568326998791185,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.28670052774077,0,0,0,0.128867461322093,0.403367049246685,0,0,0.474529061544512,0,0,0,0.19496408711912,0.898819408654221,0,0.398282546508734,0,0,0,0,0,0.0701358198903186,0,0.147610147979602,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,2.87536413054709,0,0,0,0.179397413521912,0,0.739012760666419,0,0,0,0,0,0,0,0.472905432318573,0,0.318909537314974,0.163863314715738,0.690739927463582,0.289298117163023,1.50791283939272,0.54390568381871,1.47529281905711,0.827810238914197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8244312647074,0,0,0,0.164140899745061,1.45740418314925,0.18542530201051,2.22132145037209,0,0,0.188368457004691,1.0935538217682,0,1.5298058699447,1.6794174278839,1.24379976423981,0.954670618015114,0,0,0,0,0,0.134864346384821,0.0826534557253359,0.26175594198403,0,0.621339313086926,0.56369293868419,0,0,0,0,0,0,0,0,0,0,1.89606672376907,0.608175645870493,0.205421914329655,1.29920822977795,1.25318686967237,1.39076948346885,0.600977247599844,1.18151621739662,0.302899349844443,0.457240839929999,0.403304740547362,0.974578807397524,0.962118416403295,0.701261413089414,0,0,0,0,0,0.375364950902364,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0,0,0,0,0,0,0,0.0574354689556133,0.476293691283074,0,0,0,0.294397840268795,0,0,0.238436189947321,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0.220591419119515,0.231867835620421 | ||
|short_description=p2@H2-Ab1 | |short_description=p2@H2-Ab1 | ||
}} | }} |
Latest revision as of 07:53, 26 September 2015
Short description: | p2@H2-Ab1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_H2-Ab1_5end |
Coexpression cluster: | MCL_coexpression_mm9:48 |
Association with transcript: | 445bp_to_ENSMUST00000173103_5end |
EntrezGene: | H2-Ab1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 2.78e-12 | 6 |
megakaryocyte | 2.78e-12 | 6 |
intestinal crypt stem cell | 1.89e-09 | 3 |
megakaryocyte-erythroid progenitor cell | 4.62e-08 | 9 |
hematopoietic lineage restricted progenitor cell | 6.34e-08 | 25 |
myeloid lineage restricted progenitor cell | 1.53e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
mucosa | 7.67e-11 | 15 |
intestinal mucosa | 6.96e-10 | 13 |
wall of intestine | 6.96e-10 | 13 |
gastrointestinal system mucosa | 6.96e-10 | 13 |
organ component layer | 9.53e-10 | 24 |
hemolymphoid system | 1.11e-09 | 48 |
immune system | 1.11e-09 | 48 |
hematopoietic system | 1.30e-07 | 45 |
blood island | 1.30e-07 | 45 |
small intestine | 9.95e-07 | 4 |