FFCP PHASE1:Mm9::chr12:80141447..80141484,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:80141447..80141484,+ | |||
|description=CAGE_peak_at_chr12:80141447..80141484,+ | |description=CAGE_peak_at_chr12:80141447..80141484,+ | ||
|id=chr12:80141447..80141484,+ | |id=chr12:80141447..80141484,+ | ||
|ontology_enrichment_celltype=CL:0002563!7.87e-12!9;CL:0002251!7.87e-12!9;CL:0000239!4.08e-09!6;CL:0000677!4.08e-09!6;CL:0000212!4.08e-09!6;CL:0000584!4.08e-09!6;CL:0000075!1.25e-07!7 | |ontology_enrichment_celltype=CL:0002563!7.87e-12!9;CL:0002251!7.87e-12!9;CL:0000239!4.08e-09!6;CL:0000677!4.08e-09!6;CL:0000212!4.08e-09!6;CL:0000584!4.08e-09!6;CL:0000075!1.25e-07!7 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,6.53e-16,9;CL:0002251,6.53e-16,9;CL:0000239,9.56e-15,6;CL:0000677,9.56e-15,6;CL:0000584,9.56e-15,6;CL:0000075,1.58e-12,7;CL:0000066,2.05e-09,25;CL:0002076,5.46e-09,15;CL:0000682,7.73e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!8.85e-25!43;UBERON:0000344!2.78e-19!15;UBERON:0005409!4.61e-19!59;UBERON:0001242!7.11e-17!13;UBERON:0000060!7.11e-17!13;UBERON:0001262!7.11e-17!13;UBERON:0004786!7.11e-17!13;UBERON:0004923!1.40e-15!24;UBERON:0003350!7.87e-12!9;UBERON:0004808!7.87e-12!9;UBERON:0001277!7.87e-12!9;UBERON:0000485!3.04e-09!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.03e-51,31;UBERON:0005409,3.14e-34,47;UBERON:0000344,8.56e-29,15;UBERON:0004923,3.84e-25,24;UBERON:0001242,1.32e-24,13;UBERON:0001262,1.32e-24,13;UBERON:0004786,1.32e-24,13;UBERON:0003350,6.53e-16,9;UBERON:0004808,6.53e-16,9;UBERON:0001277,6.53e-16,9;UBERON:0004119,6.01e-14,118;UBERON:0000925,6.01e-14,118;UBERON:0006595,6.01e-14,118;UBERON:0000485,9.18e-13,11;UBERON:0001007,3.86e-12,116;UBERON:0001555,3.86e-12,116;UBERON:0007026,3.86e-12,116;UBERON:0002108,1.58e-10,4;UBERON:0004921,2.63e-10,114;UBERON:0000331,2.08e-08,3;UBERON:0002116,2.08e-08,3;UBERON:0001204,2.08e-08,3;UBERON:0001168,2.08e-08,3;UBERON:0005631,1.80e-07,3;UBERON:0000478,1.80e-07,3;UBERON:0000158,1.80e-07,3 | |||
|phase1_expression=0,10.8182376368202,6.82498859084304,12.40103266358,25.5456822272637,2.85394762250213,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.99981056983517,3.89995777814189,11.4846392823004,6.46142994238612,1.50829862880122,7.9809836171677,8.56902441183765,5.54326276638262,0,0,0,1.73310971850765,0.498703936075477,1.63335485009895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,2.74041311325744,0,0,0,0,0,0,0,0,17.7980376768749,0,0,0,0,0,3.72783522436244,0,0,3.57639877292028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0.219550115291051,0,0,0,3.30418782983798,7.66906643324278,0,0.464473343720877,0.644337306610467,2.42020229548011,2.66853652613844,4.37518940058886,6.16887780007865,8.39964669092456,3.77002813200404,3.18330355265841,3.8992817423824,6.29173586057955,3.8904848977445,8.36393347668342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,2.06742634534577,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64270195644597,2.54198485036584,0,0,0,0,0,0,5.24665505933731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0.523511883968059,4.79575401179634,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.44449345560323,0.412070114477788,0,0.252697211763798,0,0,0.280924522409647,0.192075457214608,0.34461281373368,0,0,0,0,0.294397840268795,0.342869252385415,0.532427418478012,0.715308569841963,0.145346416632329,0.376437521661322,0.169229215783353,0.365855945745545,0,0.271608227691724,0.561142271657738,0.118635018124174,0,1.22769312950907,0.464810523557898,0.192906610981141,0,0.935726433781634,0.859484216193193,0,0,0 | |phase1_expression=0,10.8182376368202,6.82498859084304,12.40103266358,25.5456822272637,2.85394762250213,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.99981056983517,3.89995777814189,11.4846392823004,6.46142994238612,1.50829862880122,7.9809836171677,8.56902441183765,5.54326276638262,0,0,0,1.73310971850765,0.498703936075477,1.63335485009895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,2.74041311325744,0,0,0,0,0,0,0,0,17.7980376768749,0,0,0,0,0,3.72783522436244,0,0,3.57639877292028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0.219550115291051,0,0,0,3.30418782983798,7.66906643324278,0,0.464473343720877,0.644337306610467,2.42020229548011,2.66853652613844,4.37518940058886,6.16887780007865,8.39964669092456,3.77002813200404,3.18330355265841,3.8992817423824,6.29173586057955,3.8904848977445,8.36393347668342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,2.06742634534577,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64270195644597,2.54198485036584,0,0,0,0,0,0,5.24665505933731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0.523511883968059,4.79575401179634,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.44449345560323,0.412070114477788,0,0.252697211763798,0,0,0.280924522409647,0.192075457214608,0.34461281373368,0,0,0,0,0.294397840268795,0.342869252385415,0.532427418478012,0.715308569841963,0.145346416632329,0.376437521661322,0.169229215783353,0.365855945745545,0,0.271608227691724,0.561142271657738,0.118635018124174,0,1.22769312950907,0.464810523557898,0.192906610981141,0,0.935726433781634,0.859484216193193,0,0,0 | ||
|short_description=p@chr12:80141447..80141484,+ | |short_description=p@chr12:80141447..80141484,+ | ||
}} | }} |
Latest revision as of 07:16, 5 August 2015
Short description: | p@chr12:80141447..80141484, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:80141447..80141484, + |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 6.53e-16 | 9 |
epithelial cell of alimentary canal | 6.53e-16 | 9 |
brush border epithelial cell | 9.56e-15 | 6 |
gut absorptive cell | 9.56e-15 | 6 |
enterocyte | 9.56e-15 | 6 |
columnar/cuboidal epithelial cell | 1.58e-12 | 7 |
epithelial cell | 2.05e-09 | 25 |
endo-epithelial cell | 5.46e-09 | 15 |
M cell of gut | 7.73e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.03e-51 | 31 |
gastrointestinal system | 3.14e-34 | 47 |
mucosa | 8.56e-29 | 15 |
organ component layer | 3.84e-25 | 24 |
intestinal mucosa | 1.32e-24 | 13 |
wall of intestine | 1.32e-24 | 13 |
gastrointestinal system mucosa | 1.32e-24 | 13 |
epithelium of mucosa | 6.53e-16 | 9 |
gastrointestinal system epithelium | 6.53e-16 | 9 |
intestinal epithelium | 6.53e-16 | 9 |
endoderm-derived structure | 6.01e-14 | 118 |
endoderm | 6.01e-14 | 118 |
presumptive endoderm | 6.01e-14 | 118 |
simple columnar epithelium | 9.18e-13 | 11 |
digestive system | 3.86e-12 | 116 |
digestive tract | 3.86e-12 | 116 |
primitive gut | 3.86e-12 | 116 |
small intestine | 1.58e-10 | 4 |
subdivision of digestive tract | 2.63e-10 | 114 |
ileal mucosa | 2.08e-08 | 3 |
ileum | 2.08e-08 | 3 |
mucosa of small intestine | 2.08e-08 | 3 |
wall of small intestine | 2.08e-08 | 3 |
extraembryonic membrane | 1.80e-07 | 3 |
extraembryonic structure | 1.80e-07 | 3 |
membranous layer | 1.80e-07 | 3 |