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FFCP PHASE1:Mm9::chr17:24625718..24625744,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=268932
|EntrezGene=268932
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q6P9K8
|UniProt=Q6P9K8
|association_with_transcript=0bp_to_ENSMUST00000024958,ENSMUST00000088474,ENSMUST00000115347,NM_027937,uc008awm.1,uc008awo.1,uc008awp.2,uc012amk.1_5end
|association_with_transcript=0bp_to_ENSMUST00000024958,ENSMUST00000088474,ENSMUST00000115347,NM_027937,uc008awm.1,uc008awo.1,uc008awp.2,uc012amk.1_5end
|cluster_id=chr17:24625718..24625744,+
|description=CAGE_peak_3_at_Caskin1_5end
|description=CAGE_peak_3_at_Caskin1_5end
|id=chr17:24625718..24625744,+
|id=chr17:24625718..24625744,+
|ontology_enrichment_celltype=CL:0000117!7.09e-13!23;CL:0000337!7.09e-13!23;CL:0000540!2.17e-11!33;CL:0000047!2.17e-11!33;CL:0000031!2.17e-11!33;CL:0000404!2.17e-11!33;CL:0000221!1.26e-10!44;CL:0000133!1.26e-10!44;CL:0002319!3.06e-10!43;CL:0000393!1.37e-08!39;CL:0000211!1.37e-08!39;CL:0000055!1.25e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,7.14e-17,23;CL:0000337,7.14e-17,23;CL:0000540,2.56e-11,33;CL:0000047,2.56e-11,33;CL:0000031,2.56e-11,33;CL:0000404,2.56e-11,33;CL:0000221,5.04e-09,44;CL:0000133,5.04e-09,44;CL:0000393,9.22e-09,39;CL:0000211,9.22e-09,39;CL:0002319,1.85e-08,43
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!1.10e-28!71;UBERON:0003075!1.10e-28!71;UBERON:0007284!1.10e-28!71;UBERON:0004121!1.13e-28!102;UBERON:0000924!1.13e-28!102;UBERON:0006601!1.13e-28!102;UBERON:0001017!2.18e-27!73;UBERON:0005743!2.18e-27!73;UBERON:0000073!5.40e-27!75;UBERON:0001016!5.40e-27!75;UBERON:0001049!5.27e-25!52;UBERON:0005068!5.27e-25!52;UBERON:0006241!5.27e-25!52;UBERON:0007135!5.27e-25!52;UBERON:0000955!3.60e-24!50;UBERON:0006238!3.60e-24!50;UBERON:0000033!6.99e-24!63;UBERON:0002616!2.20e-23!49;UBERON:0002020!8.92e-21!34;UBERON:0003056!8.53e-20!49;UBERON:0003080!2.23e-19!40;UBERON:0002780!1.24e-18!39;UBERON:0001890!1.24e-18!39;UBERON:0006240!1.24e-18!39;UBERON:0002791!8.90e-18!29;UBERON:0003528!8.90e-18!29;UBERON:0001893!8.90e-18!29;UBERON:0000956!8.98e-13!21;UBERON:0001869!8.98e-13!21;UBERON:0000203!8.98e-13!21;UBERON:0007811!1.77e-11!86;UBERON:0002619!5.10e-11!17;UBERON:0000153!1.01e-10!94;UBERON:0002021!1.49e-08!10;UBERON:0000411!1.49e-08!10;UBERON:0001950!1.49e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.59e-35,54;UBERON:0001049,1.57e-32,52;UBERON:0005068,1.57e-32,52;UBERON:0006241,1.57e-32,52;UBERON:0007135,1.57e-32,52;UBERON:0001017,2.34e-32,73;UBERON:0001016,3.91e-31,75;UBERON:0002020,5.94e-30,34;UBERON:0000955,3.54e-27,47;UBERON:0006238,3.54e-27,47;UBERON:0002616,7.32e-26,46;UBERON:0002346,1.13e-25,64;UBERON:0003075,1.13e-25,64;UBERON:0007284,1.13e-25,64;UBERON:0003528,2.57e-24,29;UBERON:0002791,2.57e-24,29;UBERON:0001893,2.57e-24,29;UBERON:0004121,4.70e-24,95;UBERON:0000924,4.70e-24,95;UBERON:0006601,4.70e-24,95;UBERON:0003080,1.03e-22,40;UBERON:0010371,2.93e-22,73;UBERON:0002780,1.90e-21,39;UBERON:0001890,1.90e-21,39;UBERON:0006240,1.90e-21,39;UBERON:0010314,2.74e-19,92;UBERON:0003056,2.94e-18,49;UBERON:0000956,3.90e-15,21;UBERON:0001869,3.90e-15,21;UBERON:0000203,3.90e-15,21;UBERON:0002021,4.09e-15,10;UBERON:0000411,4.09e-15,10;UBERON:0001950,4.09e-15,10;UBERON:0002619,2.79e-13,17;UBERON:0002420,1.23e-10,8;UBERON:0007245,1.23e-10,8;UBERON:0010009,1.23e-10,8;UBERON:0010011,1.23e-10,8;UBERON:0000454,1.23e-10,8;UBERON:0003076,3.84e-10,12;UBERON:0003057,3.84e-10,12;UBERON:0000025,7.87e-09,114;UBERON:0004111,3.63e-08,122;UBERON:0002240,7.56e-08,6;UBERON:0005174,7.56e-08,6;UBERON:0001137,7.56e-08,6;UBERON:0000369,7.44e-07,5;UBERON:0002435,7.44e-07,5;UBERON:0000204,7.44e-07,5;UBERON:0010082,7.44e-07,5;UBERON:0001948,8.64e-07,5;UBERON:0002315,8.64e-07,5
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04103896362567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0,0.436050312760893,0.439372365468944,0.972149495371417,0,0,0,0,0,0,0,0,0.809265843438391,3.70293685490423,1.90149421051854,0,0,0,0,0,0.299600110518405,3.07374644257244,0.829516898467821,1.08004750665353,1.26194976810829,5.99867067247988,5.30084498283872,0.734944795289724,1.43768206527355,0.919218786610021,4.40463523997555,7.15049093277051,9.36999852863085,1.97829431595291,2.47016637726506,4.68822033501084,7.53794097303729,6.19038871034848,7.33431589328689,4.71405736757868,3.70166370077668,1.3047961207771,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,1.12674735821344,0,0,0,0,0,0,0.11418387971906,0,0.593768556259299,0.173485326766136,0.913396434936424,1.61430848079241,1.05505848386836,2.3517741427141,1.13099932196708,0.741584903203122,0,0,0,0,0,0,4.9772735491963,6.49284791121711,0,0,0,0,8.98743836428936,5.94750783664214,6.53402630986895,9.21268897019065,12.0186264945255,9.97382613885888,10.8701646255398,0.203678727700633,0,0,0.631325567659422,0.260240885925407,0,0.180062129805349,0.90422890701429,0.544291993210623,0.384341160854549,0.937017245597288,1.29351685369508,0,0.189106080167819,0.175951124163949,0.43839146485515,0.278047249225598,0.348252166522167,0,0.59710280045548,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0.164167464079095,0,0,0,0.134206418760372,11.1453672738987,5.65975368086064,0,0,0,0,0,0.403367049246685,0,0,0.474529061544512,0.329397909448022,0,0.397912944082302,0.38992817423824,0,0,0.199141273254367,0.189667900953082,0,0,0,0,0.280543279561274,0.316182685621286,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0.238043640886014,0,0.315270288212382,0.221464689648775,0,0,0,0.144649058581512,0,0,0,0.275936746304732,5.9403718295483,7.97039468826982,0,0.252470927204373,0.315508219416257,0.780877488593277,0.430846795465598,0,0,0.283076530788832,1.21443210502468,0.584511715822624,0,8.9969968598106,0.567760340833074,0.534196811001766,0.488660878060728,0.329940245945071,0,0,0,0,0,0,0,0,0,0.632073515871632,0,0,0,0.18006109403131,0.129358683782755,0.643011105094777,0.886701168211368,1.07021290561242,0.658196082408484,0.304464949114599,3.05073220482823,2.75381692122966,0,0.16488625294148,0,0.0603129249281559,0.119372344003136,0.164140899745061,0,4.07935664423121,0,0,0,0,0.136694227721025,0,0,0.139951452323658,0.138199973804424,0,0.158167996790568,0.203319467126849,0.216010681643603,0.209088296014469,0.218362563746178,0.269728692769641,0.495920734352016,0,0.129614973291793,0,1.12738587736838,1.79419855252775,1.15820943319968,2.72231663681667,1.6790777052105,2.70329800785245,2.8165737274981,0.911430693907651,2.72634295506848,1.69108884578204,0.576060012515731,0,0.405450430580328,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0.221985953374065,0,0,0,0,0,0.428736758158132,0,9.03602948187307,8.28585425712918,9.16632821503035,9.28007184655913,6.85082519770642,7.55393897389701,11.4753825039407,5.40385443869065,7.25027854374727,10.3552062350364,0.103787347584177,0,0.341467211508268,0,0.209613162627982,0.735374033800057,0.666740183404846,0.412070114477788,1.28367683836726,0.505394423527595,0.50695859978048,0.754505365544305,0.37456602987953,0.89635213366817,0.574354689556133,0.952587382566147,0.231768651889711,0.964546102318525,0,0.588795680537589,0.685738504770831,0.70990322463735,0.715308569841963,0.581385666529314,0.470546902076653,1.26921911837515,0.182927972872773,0.526139422875686,0.950628796921032,1.12228454331548,0.355905054372522,0.886540341380071,0.818462086339379,0.77468420592983,0.192906610981141,0.749431733813838,0.935726433781634,1.07435527024149,0.382576664137687,0.661774257358546,0.463735671240843
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04103896362567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0,0.436050312760893,0.439372365468944,0.972149495371417,0,0,0,0,0,0,0,0,0.809265843438391,3.70293685490423,1.90149421051854,0,0,0,0,0,0.299600110518405,3.07374644257244,0.829516898467821,1.08004750665353,1.26194976810829,5.99867067247988,5.30084498283872,0.734944795289724,1.43768206527355,0.919218786610021,4.40463523997555,7.15049093277051,9.36999852863085,1.97829431595291,2.47016637726506,4.68822033501084,7.53794097303729,6.19038871034848,7.33431589328689,4.71405736757868,3.70166370077668,1.3047961207771,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,1.12674735821344,0,0,0,0,0,0,0.11418387971906,0,0.593768556259299,0.173485326766136,0.913396434936424,1.61430848079241,1.05505848386836,2.3517741427141,1.13099932196708,0.741584903203122,0,0,0,0,0,0,4.9772735491963,6.49284791121711,0,0,0,0,8.98743836428936,5.94750783664214,6.53402630986895,9.21268897019065,12.0186264945255,9.97382613885888,10.8701646255398,0.203678727700633,0,0,0.631325567659422,0.260240885925407,0,0.180062129805349,0.90422890701429,0.544291993210623,0.384341160854549,0.937017245597288,1.29351685369508,0,0.189106080167819,0.175951124163949,0.43839146485515,0.278047249225598,0.348252166522167,0,0.59710280045548,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0.164167464079095,0,0,0,0.134206418760372,11.1453672738987,5.65975368086064,0,0,0,0,0,0.403367049246685,0,0,0.474529061544512,0.329397909448022,0,0.397912944082302,0.38992817423824,0,0,0.199141273254367,0.189667900953082,0,0,0,0,0.280543279561274,0.316182685621286,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0.238043640886014,0,0.315270288212382,0.221464689648775,0,0,0,0.144649058581512,0,0,0,0.275936746304732,5.9403718295483,7.97039468826982,0,0.252470927204373,0.315508219416257,0.780877488593277,0.430846795465598,0,0,0.283076530788832,1.21443210502468,0.584511715822624,0,8.9969968598106,0.567760340833074,0.534196811001766,0.488660878060728,0.329940245945071,0,0,0,0,0,0,0,0,0,0.632073515871632,0,0,0,0.18006109403131,0.129358683782755,0.643011105094777,0.886701168211368,1.07021290561242,0.658196082408484,0.304464949114599,3.05073220482823,2.75381692122966,0,0.16488625294148,0,0.0603129249281559,0.119372344003136,0.164140899745061,0,4.07935664423121,0,0,0,0,0.136694227721025,0,0,0.139951452323658,0.138199973804424,0,0.158167996790568,0.203319467126849,0.216010681643603,0.209088296014469,0.218362563746178,0.269728692769641,0.495920734352016,0,0.129614973291793,0,1.12738587736838,1.79419855252775,1.15820943319968,2.72231663681667,1.6790777052105,2.70329800785245,2.8165737274981,0.911430693907651,2.72634295506848,1.69108884578204,0.576060012515731,0,0.405450430580328,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0.221985953374065,0,0,0,0,0,0.428736758158132,0,9.03602948187307,8.28585425712918,9.16632821503035,9.28007184655913,6.85082519770642,7.55393897389701,11.4753825039407,5.40385443869065,7.25027854374727,10.3552062350364,0.103787347584177,0,0.341467211508268,0,0.209613162627982,0.735374033800057,0.666740183404846,0.412070114477788,1.28367683836726,0.505394423527595,0.50695859978048,0.754505365544305,0.37456602987953,0.89635213366817,0.574354689556133,0.952587382566147,0.231768651889711,0.964546102318525,0,0.588795680537589,0.685738504770831,0.70990322463735,0.715308569841963,0.581385666529314,0.470546902076653,1.26921911837515,0.182927972872773,0.526139422875686,0.950628796921032,1.12228454331548,0.355905054372522,0.886540341380071,0.818462086339379,0.77468420592983,0.192906610981141,0.749431733813838,0.935726433781634,1.07435527024149,0.382576664137687,0.661774257358546,0.463735671240843
|short_description=p3@Caskin1
|short_description=p3@Caskin1
}}
}}

Latest revision as of 01:34, 26 September 2015

Short description:p3@Caskin1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Caskin1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000024958, ENSMUST00000088474, ENSMUST00000115347, NM_027937, uc008awm.1, uc008awo.1, uc008awp.2, uc012amk.1_5end
EntrezGene:Caskin1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Caskin1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.04
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E83.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.83
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.30
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.73
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.44
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.15
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.37
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.98
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.47
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E47.54
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.19
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.33
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.71
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.70
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I11.61
adrenal gland, embryo E18.CNhs11026.1262-18F51.06
adrenal gland, neonate N00.CNhs11191.1311-23C12.35
adrenal gland, neonate N25.CNhs11223.1377-27I31.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B24.98
cerebellum, neonate N30.CNhs11135.1395-42I26.49
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A48.99
corpus striatum, adult.CNhs10487.19-21D85.95
corpus striatum, neonate N00.CNhs11226.630-43F16.53
cortex, adult.CNhs10473.12-14D59.21
cortex, neonate N30.CNhs11107.1392-42F212.02
diencephalon, adult.CNhs10482.20-12F29.97
diencephalon, neonate N30.CNhs11201.1388-42B210.87
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C60.54
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E811.15
hippocampus, neonate N00.CNhs11228.627-43G15.66
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C25.94
medulla oblongata, neonate N30.CNhs11200.1396-42A37.97
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I99.00
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I73.05
placenta, adult pregnant day17.CNhs10464.577-18G32.75
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C94.08
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F51.79
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G52.72
testis, embryo E17.CNhs11029.486-18I51.68
testis, embryo E18.CNhs11027.503-18G52.70
testis, neonate N00.CNhs11189.1300-22B72.82
testis, neonate N07.CNhs11222.726-26I40.91
testis, neonate N10.CNhs11204.763-44D92.73
testis, neonate N20.CNhs11110.839-18H31.69
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.04
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A28.29
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.17
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D79.28
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.85
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A57.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A611.48
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.40
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.25
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A910.36
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.90
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)7.14e-1723
neuroblast (sensu Vertebrata)7.14e-1723
neuron2.56e-1133
neuronal stem cell2.56e-1133
neuroblast2.56e-1133
electrically signaling cell2.56e-1133
ectodermal cell5.04e-0944
neurectodermal cell5.04e-0944
electrically responsive cell9.22e-0939
electrically active cell9.22e-0939
neural cell1.85e-0843

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.59e-3554
neural tube1.57e-3252
neural rod1.57e-3252
future spinal cord1.57e-3252
neural keel1.57e-3252
central nervous system2.34e-3273
nervous system3.91e-3175
gray matter5.94e-3034
brain3.54e-2747
future brain3.54e-2747
regional part of brain7.32e-2646
neurectoderm1.13e-2564
neural plate1.13e-2564
presumptive neural plate1.13e-2564
brain grey matter2.57e-2429
regional part of telencephalon2.57e-2429
telencephalon2.57e-2429
ectoderm-derived structure4.70e-2495
ectoderm4.70e-2495
presumptive ectoderm4.70e-2495
anterior neural tube1.03e-2240
ecto-epithelium2.93e-2273
regional part of forebrain1.90e-2139
forebrain1.90e-2139
future forebrain1.90e-2139
structure with developmental contribution from neural crest2.74e-1992
pre-chordal neural plate2.94e-1849
cerebral cortex3.90e-1521
cerebral hemisphere3.90e-1521
pallium3.90e-1521
occipital lobe4.09e-1510
visual cortex4.09e-1510
neocortex4.09e-1510
regional part of cerebral cortex2.79e-1317
basal ganglion1.23e-108
nuclear complex of neuraxis1.23e-108
aggregate regional part of brain1.23e-108
collection of basal ganglia1.23e-108
cerebral subcortex1.23e-108
posterior neural tube3.84e-1012
chordal neural plate3.84e-1012
tube7.87e-09114
anatomical conduit3.63e-08122
spinal cord7.56e-086
dorsal region element7.56e-086
dorsum7.56e-086
corpus striatum7.44e-075
striatum7.44e-075
ventral part of telencephalon7.44e-075
future corpus striatum7.44e-075
regional part of spinal cord8.64e-075
gray matter of spinal cord8.64e-075
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