FFCP PHASE1:Hg19::chr11:116706945..116706953,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:116706945..116706953,- | |||
|coexpression_cluster_id=C129 | |||
|description=CAGE_peak_at_chr11:116706945..116706953,- | |description=CAGE_peak_at_chr11:116706945..116706953,- | ||
|id=chr11:116706945..116706953,- | |id=chr11:116706945..116706953,- | ||
|ontology_enrichment_celltype=CL:0000181!8.41e-30!12;CL:0000417!8.41e-30!12;CL:0000668!8.41e-30!12;CL:0000414!8.41e-30!12;CL:0000412!8.41e-30!12;CL:0000182!8.41e-30!12;CL:0000223!6.65e-10!59 | |ontology_enrichment_celltype=CL:0000181!8.41e-30!12;CL:0000417!8.41e-30!12;CL:0000668!8.41e-30!12;CL:0000414!8.41e-30!12;CL:0000412!8.41e-30!12;CL:0000182!8.41e-30!12;CL:0000223!6.65e-10!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;3.27e-09;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.89e-09,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.03e-10;11!UBERON:0009497;1.04e-08;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!3.58e-33!19;UBERON:0006925!3.58e-33!19;UBERON:0008836!3.58e-33!19;UBERON:0008835!1.55e-28!22;UBERON:0003894!1.55e-28!22;UBERON:0009854!2.94e-27!23;UBERON:0007499!5.22e-25!25;UBERON:0009497!5.22e-25!25;UBERON:0000015!5.22e-25!25;UBERON:0002423!5.22e-25!25;UBERON:0006235!5.22e-25!25;UBERON:0004161!5.22e-25!25;UBERON:0005057!5.16e-24!26;UBERON:0009856!5.16e-24!26;UBERON:0002365!5.35e-20!31;UBERON:0002330!5.35e-20!31;UBERON:0002368!1.31e-17!35;UBERON:0003929!3.23e-17!54;UBERON:0000949!1.73e-13!45;UBERON:0004921!5.63e-13!129;UBERON:0004185!5.63e-13!129;UBERON:0002530!1.09e-12!59;UBERON:0005172!7.33e-11!55;UBERON:0005173!7.33e-11!55;UBERON:0005911!7.47e-11!82;UBERON:0001007!1.91e-10!155;UBERON:0001555!1.91e-10!155;UBERON:0007026!1.91e-10!155;UBERON:0002417!1.07e-09!61;UBERON:0000916!1.07e-09!61;UBERON:0004119!2.12e-09!169;UBERON:0000925!2.12e-09!169;UBERON:0006595!2.12e-09!169;UBERON:0000160!8.76e-09!27;UBERON:0005409!8.49e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.32e-21;19!UBERON:0006925;2.32e-21;19!UBERON:0002108;1.10e-20;4!UBERON:0002423;2.29e-16;25!UBERON:0002365;3.66e-13;31!UBERON:0002330;3.66e-13;31!UBERON:0002368;4.28e-11;33!UBERON:0002114;1.47e-09;2!UBERON:0000949;4.46e-08;43!UBERON:0001007;1.46e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.98e-21,19;UBERON:0006925,1.98e-21,19;UBERON:0008836,1.98e-21,19;UBERON:0002108,1.10e-20,4;UBERON:0008835,1.39e-18,22;UBERON:0003894,1.39e-18,22;UBERON:0009854,8.44e-18,23;UBERON:0007499,2.03e-16,25;UBERON:0009497,2.03e-16,25;UBERON:0000015,2.03e-16,25;UBERON:0002423,2.03e-16,25;UBERON:0006235,2.03e-16,25;UBERON:0004161,2.03e-16,25;UBERON:0009856,8.31e-16,26;UBERON:0002365,2.45e-13,31;UBERON:0002330,2.45e-13,31;UBERON:0002368,7.26e-12,35;UBERON:0002114,1.67e-09,2;UBERON:0000949,2.54e-09,45;UBERON:0003929,7.87e-08,54;UBERON:0005172,7.87e-08,54;UBERON:0005173,7.87e-08,54;UBERON:0004921,1.31e-07,118;UBERON:0002530,3.39e-07,59;UBERON:0002417,4.41e-07,60;UBERON:0000916,4.41e-07,60 | |||
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|short_description=p@chr11:116706945..116706953,- | |short_description=p@chr11:116706945..116706953,- | ||
}} | }} |
Latest revision as of 18:29, 23 July 2015
Short description: | p@chr11:116706945..116706953, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:116706945..116706953, - |
Coexpression cluster: | C129_liver_Hepatocyte_colon_duodenum_temporal_testicular_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.89e-09 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 1.98e-21 | 19 |
digestive gland | 1.98e-21 | 19 |
liver bud | 1.98e-21 | 19 |
small intestine | 1.10e-20 | 4 |
hepatic diverticulum | 1.39e-18 | 22 |
liver primordium | 1.39e-18 | 22 |
digestive tract diverticulum | 8.44e-18 | 23 |
epithelial sac | 2.03e-16 | 25 |
epithelium of foregut-midgut junction | 2.03e-16 | 25 |
anatomical boundary | 2.03e-16 | 25 |
hepatobiliary system | 2.03e-16 | 25 |
foregut-midgut junction | 2.03e-16 | 25 |
septum transversum | 2.03e-16 | 25 |
sac | 8.31e-16 | 26 |
exocrine gland | 2.45e-13 | 31 |
exocrine system | 2.45e-13 | 31 |
endocrine gland | 7.26e-12 | 35 |
duodenum | 1.67e-09 | 2 |
endocrine system | 2.54e-09 | 45 |
gut epithelium | 7.87e-08 | 54 |
abdomen element | 7.87e-08 | 54 |
abdominal segment element | 7.87e-08 | 54 |
subdivision of digestive tract | 1.31e-07 | 118 |
gland | 3.39e-07 | 59 |
abdominal segment of trunk | 4.41e-07 | 60 |
abdomen | 4.41e-07 | 60 |