Personal tools

FFCP PHASE1:Mm9::chr16:96583261..96583272,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=72058
|EntrezGene=72058
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=D3YXH1
|UniProt=D3YXH1
|association_with_transcript=-2bp_to_ENSMUST00000113794_5end
|association_with_transcript=-2bp_to_ENSMUST00000113794_5end
|cluster_id=chr16:96583261..96583272,+
|description=CAGE_peak_4_at_Igsf5_5end
|description=CAGE_peak_4_at_Igsf5_5end
|id=chr16:96583261..96583272,+
|id=chr16:96583261..96583272,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000066,8.51e-09,25;CL:0000239,1.89e-08,6;CL:0000677,1.89e-08,6;CL:0000584,1.89e-08,6;CL:0000223,2.29e-07,20;CL:0000075,4.42e-07,7;CL:0000182,5.20e-07,5
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!7.47e-22!130;UBERON:0000925!7.47e-22!130;UBERON:0006595!7.47e-22!130;UBERON:0001007!5.43e-21!128;UBERON:0001555!5.43e-21!128;UBERON:0007026!5.43e-21!128;UBERON:0004921!4.67e-20!126;UBERON:0004185!4.67e-20!126;UBERON:0005409!2.51e-15!59;UBERON:0005177!2.67e-14!85;UBERON:0000160!4.07e-14!43;UBERON:0009569!1.97e-11!66;UBERON:0000466!6.37e-11!79;UBERON:0000077!3.12e-10!97;UBERON:0002365!3.51e-10!25;UBERON:0002330!3.51e-10!25;UBERON:0002100!4.20e-10!98;UBERON:0009854!1.20e-09!23;UBERON:0009856!1.20e-09!23;UBERON:0001041!3.86e-09!92;UBERON:0002107!4.37e-09!22;UBERON:0007499!4.37e-09!22;UBERON:0006925!4.37e-09!22;UBERON:0009497!4.37e-09!22;UBERON:0000015!4.37e-09!22;UBERON:0002423!4.37e-09!22;UBERON:0006235!4.37e-09!22;UBERON:0008835!4.37e-09!22;UBERON:0003894!4.37e-09!22;UBERON:0004161!4.37e-09!22;UBERON:0008836!4.37e-09!22;UBERON:0000481!9.66e-09!230;UBERON:0000344!2.20e-08!15;UBERON:0003104!3.75e-08!131;UBERON:0009142!3.75e-08!131;UBERON:0006554!8.34e-08!16;UBERON:0001242!1.21e-07!13;UBERON:0000060!1.21e-07!13;UBERON:0001262!1.21e-07!13;UBERON:0004786!1.21e-07!13;UBERON:0005172!1.97e-07!49;UBERON:0005173!1.97e-07!49;UBERON:0002417!1.97e-07!49;UBERON:0000916!1.97e-07!49;UBERON:0005911!4.80e-07!69;UBERON:0001008!5.27e-07!17;UBERON:0002113!8.53e-07!14;UBERON:0003918!8.53e-07!14;UBERON:0005095!8.53e-07!14;UBERON:0007687!8.53e-07!14
|ontology_enrichment_uberon_v019_2=UBERON:0005177,3.38e-16,79;UBERON:0001007,3.64e-13,116;UBERON:0001555,3.64e-13,116;UBERON:0007026,3.64e-13,116;UBERON:0002100,7.88e-13,90;UBERON:0004921,8.49e-13,114;UBERON:0004119,1.01e-12,118;UBERON:0000925,1.01e-12,118;UBERON:0006595,1.01e-12,118;UBERON:0009569,2.76e-12,66;UBERON:0009854,2.38e-10,23;UBERON:0009856,2.38e-10,23;UBERON:0005172,3.32e-10,49;UBERON:0005173,3.32e-10,49;UBERON:0002417,3.32e-10,49;UBERON:0000916,3.32e-10,49;UBERON:0002107,1.71e-09,22;UBERON:0007499,1.71e-09,22;UBERON:0006925,1.71e-09,22;UBERON:0009497,1.71e-09,22;UBERON:0000015,1.71e-09,22;UBERON:0002423,1.71e-09,22;UBERON:0006235,1.71e-09,22;UBERON:0008835,1.71e-09,22;UBERON:0003894,1.71e-09,22;UBERON:0004161,1.71e-09,22;UBERON:0008836,1.71e-09,22;UBERON:0002365,5.07e-09,25;UBERON:0002330,5.07e-09,25;UBERON:0001242,1.30e-08,13;UBERON:0001262,1.30e-08,13;UBERON:0004786,1.30e-08,13;UBERON:0000344,1.36e-08,15;UBERON:0002113,3.98e-08,14;UBERON:0003918,3.98e-08,14;UBERON:0011143,3.98e-08,14;UBERON:0005095,3.98e-08,14;UBERON:0007687,3.98e-08,14;UBERON:0005409,5.79e-08,47;UBERON:0003104,7.82e-08,61;UBERON:0009142,7.82e-08,61;UBERON:0006554,2.67e-07,18;UBERON:0005911,3.65e-07,69;UBERON:0001041,6.31e-07,80;UBERON:0001008,9.07e-07,19
|phase1_expression=0,4.88565570695105,7.27998783023258,4.53696316960245,7.01254021924886,1.17515490338323,1.40167584357315,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,1.27564935226605,0,0,0.799962113967033,1.37645568640302,1.72269589234506,2.15380998079537,2.15471232685889,1.14014051673824,1.26015064879965,1.77384408524244,0,0,0,0.866554859253824,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0.210324961351382,0,0.220868540951614,0,0.0958454710182364,0,0,0.127687338085188,0,0.263772575460388,0.0914876436024097,0,0,0,0.15279824777681,0,0.142371680799103,0,0,0,4.92769630792852,0.860423876981386,14.2793980078628,1.07940638327563,2.59910566979068,1.79210754838934,1.12355536105401,0,0,0,0,0,0,0,0.216491041011214,0,1.01104889002957,2.39786147410026,0,0,0,0,0,0,0,0,1.23597483867187,0,0,0,0,0,1.86391761218122,0,0,0.255457055208591,0,0,0,0.149790639404823,0,0,0,0,0.41557608911912,0.162241263067758,0.101839363850316,0,0.252722758433675,1.47309299120532,0,0,0,0,0,0,0.187403449119458,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0,4.29544417878937,0.528901133327089,0.213288250535234,0,0.257734922644187,1.00841762311671,0.444756087689741,0.380451252225118,0.949058123089023,0.658795818896044,0.754005626400808,0,0.38992817423824,1.79763881730844,1.29682829924817,2.58883655230677,1.32767530667157,0.456994050438915,4.50830942692322,1.62921062276251,2.32742984601151,2.03393877681924,1.89709611372772,2.80459281161244,3.61097074035162,3.70191491765402,2.66807364378434,0,0,0,0.405720242777006,0.72353147925725,1.2731292589071,0.863088412352432,0.810676133875177,2.19649130550465,4.31304619582064,3.34926852901653,2.18426371180192,3.78868316920668,3.04975602987251,1.92977408545347,1.29327233116623,0.189491411770485,0.325929952884052,0.848725428875941,0.704070744865506,1.17254380209271,0,1.75620283072019,1.26108115284953,0.44292937929755,0.797273843287435,1.63863314715738,1.89953480052485,1.88043776155965,0,0,0.983528546038072,0.827810238914197,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.851640511249612,0.178065603667255,0,1.15479086080775,2.65490276679926,0,0.604647113929502,0.565815239267694,0.295301892880773,0.614870295887855,1.55056975900933,1.09060118843252,1.06949213515416,1.26414703174326,1.05418608574999,2.06271086496374,0,0,0,0,0,0,0,0,0.938686832254841,0.847328283455281,0.661585194164886,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,6.68269432610579,0.632671987162271,0.813277868507395,1.62008011232702,1.67270636811575,2.18362563746178,1.48350781023303,2.89287095038676,7.85267825952089,0.129614973291793,1.24267862617385,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0.209718688851422,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,7.72758376128762,0.375364950902364,0.549454872801795,0,2.00628841614145,0.564751842617067,0,0.572895513439397,0.343706364687375,0,0,0,0,0,0,0,0,0.170733605754134,0.486213434136588,0,0,0.222246727801615,0.412070114477788,0,0,0.50695859978048,0.188626341386076,0.187283014939765,0.256100609619477,0.229741875822453,0,0,0.38581844092741,0,0,1.02860775715625,0,0.238436189947321,0.436039249896986,0.0941093804153306,0.0846146078916765,0,0.526139422875686,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0,0,0.233931608445408,0.214871054048298,0,0,0
|phase1_expression=0,4.88565570695105,7.27998783023258,4.53696316960245,7.01254021924886,1.17515490338323,1.40167584357315,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,1.27564935226605,0,0,0.799962113967033,1.37645568640302,1.72269589234506,2.15380998079537,2.15471232685889,1.14014051673824,1.26015064879965,1.77384408524244,0,0,0,0.866554859253824,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0.210324961351382,0,0.220868540951614,0,0.0958454710182364,0,0,0.127687338085188,0,0.263772575460388,0.0914876436024097,0,0,0,0.15279824777681,0,0.142371680799103,0,0,0,4.92769630792852,0.860423876981386,14.2793980078628,1.07940638327563,2.59910566979068,1.79210754838934,1.12355536105401,0,0,0,0,0,0,0,0.216491041011214,0,1.01104889002957,2.39786147410026,0,0,0,0,0,0,0,0,1.23597483867187,0,0,0,0,0,1.86391761218122,0,0,0.255457055208591,0,0,0,0.149790639404823,0,0,0,0,0.41557608911912,0.162241263067758,0.101839363850316,0,0.252722758433675,1.47309299120532,0,0,0,0,0,0,0.187403449119458,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0,4.29544417878937,0.528901133327089,0.213288250535234,0,0.257734922644187,1.00841762311671,0.444756087689741,0.380451252225118,0.949058123089023,0.658795818896044,0.754005626400808,0,0.38992817423824,1.79763881730844,1.29682829924817,2.58883655230677,1.32767530667157,0.456994050438915,4.50830942692322,1.62921062276251,2.32742984601151,2.03393877681924,1.89709611372772,2.80459281161244,3.61097074035162,3.70191491765402,2.66807364378434,0,0,0,0.405720242777006,0.72353147925725,1.2731292589071,0.863088412352432,0.810676133875177,2.19649130550465,4.31304619582064,3.34926852901653,2.18426371180192,3.78868316920668,3.04975602987251,1.92977408545347,1.29327233116623,0.189491411770485,0.325929952884052,0.848725428875941,0.704070744865506,1.17254380209271,0,1.75620283072019,1.26108115284953,0.44292937929755,0.797273843287435,1.63863314715738,1.89953480052485,1.88043776155965,0,0,0.983528546038072,0.827810238914197,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.851640511249612,0.178065603667255,0,1.15479086080775,2.65490276679926,0,0.604647113929502,0.565815239267694,0.295301892880773,0.614870295887855,1.55056975900933,1.09060118843252,1.06949213515416,1.26414703174326,1.05418608574999,2.06271086496374,0,0,0,0,0,0,0,0,0.938686832254841,0.847328283455281,0.661585194164886,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,6.68269432610579,0.632671987162271,0.813277868507395,1.62008011232702,1.67270636811575,2.18362563746178,1.48350781023303,2.89287095038676,7.85267825952089,0.129614973291793,1.24267862617385,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0.209718688851422,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,7.72758376128762,0.375364950902364,0.549454872801795,0,2.00628841614145,0.564751842617067,0,0.572895513439397,0.343706364687375,0,0,0,0,0,0,0,0,0.170733605754134,0.486213434136588,0,0,0.222246727801615,0.412070114477788,0,0,0.50695859978048,0.188626341386076,0.187283014939765,0.256100609619477,0.229741875822453,0,0,0.38581844092741,0,0,1.02860775715625,0,0.238436189947321,0.436039249896986,0.0941093804153306,0.0846146078916765,0,0.526139422875686,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0,0,0.233931608445408,0.214871054048298,0,0,0
|short_description=p4@Igsf5
|short_description=p4@Igsf5
}}
}}

Latest revision as of 22:11, 25 September 2015

Short description:p4@Igsf5
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Igsf5_5end
Coexpression cluster:NA
Association with transcript: -2bp_to_ENSMUST00000113794_5end
EntrezGene:Igsf5
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Igsf5

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.89
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I67.28
CD326+ enterocyte, pool1.CNhs13542.11848-124I34.54
CD326+ enterocyte, pool2.CNhs13197.11849-124I47.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.40
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.38
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I12.15
GP2+ M cell, pool3.CNhs13240.11847-124I22.15
Ileum epithelium, pool1.CNhs13199.10252-104B91.14
Ileum epithelium, pool2.CNhs13232.10253-104C11.26
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.93
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C414.28
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F42.60
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.40
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I34.30
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E31.30
intestine, neonate N30.CNhs11131.1384-42G12.59
kidney, embryo E14.CNhs10606.411-4I91.33
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I21.63
kidney, embryo E18.CNhs11001.1288-20C72.33
kidney, neonate N00.CNhs11214.646-21G72.03
kidney, neonate N10.CNhs11206.758-6D51.90
kidney, neonate N20.CNhs11113.832-19I12.80
kidney, neonate N25.CNhs11122.1353-25F33.61
kidney, neonate N30.CNhs11203.1385-42H13.70
liver, adult pregnant day01.CNhs10466.508-5B22.67
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G22.20
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H23.35
liver, neonate N10.CNhs11115.751-24B92.18
liver, neonate N20.CNhs11220.823-25A33.79
liver, neonate N25.CNhs11198.1368-26H13.05
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B11.29
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A61.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C61.76
lung, neonate N06.CNhs11212.683-20E51.26
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A41.64
lung, neonate N25.CNhs11119.1359-25C71.90
lung, neonate N30.CNhs11133.1394-42H21.88
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G61.15
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H66.68
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D41.62
stomach, embryo E17.CNhs11006.1035-18D51.67
stomach, embryo E18.CNhs10999.1286-20C62.18
stomach, neonate N03.CNhs11193.1340-24B81.48
stomach, neonate N07.CNhs11210.718-18A92.89
stomach, neonate N25.CNhs11104.1355-25E47.85
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E47.73
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
epithelial cell8.51e-0925
brush border epithelial cell1.89e-086
gut absorptive cell1.89e-086
enterocyte1.89e-086
endodermal cell2.29e-0720
columnar/cuboidal epithelial cell4.42e-077
hepatocyte5.20e-075

Uber anatomy
Ontology termp-valuen
trunk region element3.38e-1679
digestive system3.64e-13116
digestive tract3.64e-13116
primitive gut3.64e-13116
trunk7.88e-1390
subdivision of digestive tract8.49e-13114
endoderm-derived structure1.01e-12118
endoderm1.01e-12118
presumptive endoderm1.01e-12118
subdivision of trunk2.76e-1266
digestive tract diverticulum2.38e-1023
sac2.38e-1023
abdomen element3.32e-1049
abdominal segment element3.32e-1049
abdominal segment of trunk3.32e-1049
abdomen3.32e-1049
liver1.71e-0922
epithelial sac1.71e-0922
digestive gland1.71e-0922
epithelium of foregut-midgut junction1.71e-0922
anatomical boundary1.71e-0922
hepatobiliary system1.71e-0922
foregut-midgut junction1.71e-0922
hepatic diverticulum1.71e-0922
liver primordium1.71e-0922
septum transversum1.71e-0922
liver bud1.71e-0922
exocrine gland5.07e-0925
exocrine system5.07e-0925
intestinal mucosa1.30e-0813
wall of intestine1.30e-0813
gastrointestinal system mucosa1.30e-0813
mucosa1.36e-0815
kidney3.98e-0814
kidney mesenchyme3.98e-0814
upper urinary tract3.98e-0814
kidney rudiment3.98e-0814
kidney field3.98e-0814
gastrointestinal system5.79e-0847
mesenchyme7.82e-0861
entire embryonic mesenchyme7.82e-0861
urinary system structure2.67e-0718
endo-epithelium3.65e-0769
foregut6.31e-0780
renal system9.07e-0719
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr16:96583261..96583272,%2B&oldid=4217110"