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FFCP PHASE1:Mm9::chr12:109241852..109241873,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=58208
|EntrezGene=58208
|HGNC=
|HGNC=
|MCL_coexpression_id=1318
|TSSclassifier=NA
|UniProt=Q99PV8
|UniProt=Q99PV8
|association_with_transcript=-40bp_to_ENSMUST00000066060_5end
|association_with_transcript=-40bp_to_ENSMUST00000066060_5end
|cluster_id=chr12:109241852..109241873,-
|description=CAGE_peak_4_at_Bcl11b_5end
|description=CAGE_peak_4_at_Bcl11b_5end
|id=chr12:109241852..109241873,-
|id=chr12:109241852..109241873,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000791,1.06e-10,9;CL:0000789,1.06e-10,9;CL:0002420,1.06e-10,9;CL:0002419,1.06e-10,9;CL:0000790,1.06e-10,9;CL:0000624,1.48e-09,8;CL:0000084,2.44e-08,11;CL:0000827,2.44e-08,11;CL:0000838,1.85e-07,12;CL:0000893,3.73e-07,6;CL:0002489,3.73e-07,6;CL:0000898,3.73e-07,6;CL:0000809,3.73e-07,6;CL:0000810,3.73e-07,6;CL:0000895,3.73e-07,6;CL:0000808,3.73e-07,6;CL:0000894,3.73e-07,6;CL:0000806,3.73e-07,6;CL:0000807,3.73e-07,6;CL:0000805,3.73e-07,6;CL:0002425,3.73e-07,6;CL:0002436,3.73e-07,6;CL:0002427,3.73e-07,6;CL:0002428,3.73e-07,6;CL:0002429,3.73e-07,6;CL:0002433,3.73e-07,6;CL:0002431,3.73e-07,6;CL:0002432,3.73e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000153!1.83e-15!94;UBERON:0000064!3.59e-15!99;UBERON:0007811!2.91e-14!86;UBERON:0003408!4.93e-11!24;UBERON:0002370!6.15e-11!23;UBERON:0000974!6.15e-11!23;UBERON:0004807!6.15e-11!23;UBERON:0005058!6.15e-11!23;UBERON:0003351!6.15e-11!23;UBERON:0009113!6.15e-11!23;UBERON:0003295!6.15e-11!23;UBERON:0009722!6.15e-11!23;UBERON:0005562!6.15e-11!23;UBERON:0007690!6.15e-11!23;UBERON:0006562!6.40e-11!24;UBERON:0001557!6.40e-11!24;UBERON:0001042!6.40e-11!24;UBERON:0008814!6.40e-11!24;UBERON:0009145!6.40e-11!24;UBERON:0004177!4.59e-09!29;UBERON:0000072!1.80e-08!27;UBERON:0002780!7.51e-08!39;UBERON:0001890!7.51e-08!39;UBERON:0006240!7.51e-08!39;UBERON:0002020!8.17e-08!34;UBERON:0003080!1.06e-07!40;UBERON:0002791!3.06e-07!29;UBERON:0003528!3.06e-07!29;UBERON:0001893!3.06e-07!29;UBERON:0000956!3.97e-07!21;UBERON:0001869!3.97e-07!21;UBERON:0000203!3.97e-07!21;UBERON:0003056!5.77e-07!49;UBERON:0000063!8.71e-07!35
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.30e-20,23;UBERON:0000974,2.30e-20,23;UBERON:0004807,2.30e-20,23;UBERON:0005058,2.30e-20,23;UBERON:0003351,2.30e-20,23;UBERON:0009113,2.30e-20,23;UBERON:0003295,2.30e-20,23;UBERON:0009722,2.30e-20,23;UBERON:0005562,2.30e-20,23;UBERON:0007690,2.30e-20,23;UBERON:0006562,3.14e-19,24;UBERON:0003408,3.14e-19,24;UBERON:0001557,3.14e-19,24;UBERON:0001042,3.14e-19,24;UBERON:0008814,3.14e-19,24;UBERON:0009145,3.14e-19,24;UBERON:0000072,2.44e-16,27;UBERON:0004177,9.43e-15,29;UBERON:0005057,9.43e-15,29;UBERON:0000077,4.06e-11,35;UBERON:0007811,1.23e-10,36;UBERON:0000153,8.78e-09,43;UBERON:0000065,1.35e-08,41;UBERON:0002020,1.87e-08,34;UBERON:0001004,2.98e-08,42;UBERON:0003528,2.16e-07,29;UBERON:0002791,2.16e-07,29;UBERON:0001893,2.16e-07,29;UBERON:0002390,2.57e-07,45;UBERON:0003061,2.57e-07,45;UBERON:0002193,2.81e-07,48;UBERON:0002405,2.81e-07,48;UBERON:0003929,5.85e-07,55
|phase1_expression=0.80074423552397,0.348975407639361,1.36499771816861,0,0,0.503637815735669,0.467225281191051,6.45616617207881,3.66050677594334,1.87251621057595,1.19852577757853,1.67521533890206,5.9920255475922,6.29426897416781,0,0,0,0,0.274228867211478,0.42438965179803,1.9559956734746,0.496454756004426,0.261199789138935,1.59992422793407,0.45881856213434,0,0,0.646413698057667,1.14014051673824,1.51218077855958,1.55211357458713,0,0,0,0.866554859253824,1.32987716286794,2.45003227514843,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,5.07753499407941,4.7053131879945,0,0,0,0.404632921719196,0.528990979272033,0,0,0,0,0,0,0,0,4.25127410464758,4.3201900266141,3.57552434297349,0.285650984403804,0,4.04219637409348,24.2489041676138,0.919218786610021,0,0.383062014255563,0.46081959976873,0.395658863190582,1.73826522844578,2.08365348222704,0,0,0,2.06240009831567,1.56608848879013,1.4911955666024,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0.258937883647172,0,0.346970653532272,0,0.230615497256059,0,0.117588707135705,0,0,0,0,0,0,0,1.86391761218122,0,0.209446706813455,0.510914110417183,0,0,0,0.149790639404823,3.66000482254901,20.356005042284,0.521472960576829,2.55715457330331,0,3.0825839982874,0.305518091550949,0,0,0,0.260240885925407,0.229902104433473,0.180062129805349,0.753524089178575,0.340182495756639,0.512454881139399,0.374806898238915,0,0.215567992932842,0.189106080167819,0.527853372491847,0.657587197282725,0.834141747676794,0.696504333044333,1.4404749548556,0,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0.23674473558521,0.393528463494808,0.154267112887378,0,0,0.350296027101508,0,0.656669856316381,0,0.146199987425332,0,0,2.3131894342054,4.83651678182637,0.330418782983798,0,0.426576501070468,0,0.515469845288373,1.00841762311671,0.889512175379481,0.380451252225118,1.42358718463353,0.988193728344065,2.5133520880027,0.397912944082302,0.974820435595601,0,1.08069024937347,1.99141273254367,0,0.114248512609729,0,0,0,0,0.0632365371242573,0.295220295959204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0.318909537314974,0.491589944147214,0.518054945597687,0.289298117163023,0,0,0,0.275936746304732,0.160550589987792,0,0,0,0,0,0.215423397732799,0,0,0,0.404810701674894,0.292255857911312,0,0.963963949265421,0,0,0,0,0,0.971122544619926,0.302323556964751,0.377210159511796,0,0,0,0,0,0,0,0,0,0.18006109403131,0.776152102696527,2.14337035031592,0.709360934569094,0.535106452806212,0.658196082408484,0.608929898229199,0,0,0,1.48397627647332,2.26050197374268,1.44751019827574,2.14870219205646,0.328281799490123,0,0,0,0,0,0.941842285023455,0.683471138605126,0.686334519619568,0,0,0,0,0,0.203319467126849,0.648032044930808,0.418176592028937,0.436725127492355,1.21377911746339,0.247960367176008,0,0.648074866458964,0.621339313086926,0,0.299033092087958,0.330916980914195,0,0,0,0.117357238645754,0,0,0,0,2.52808896502543,1.82452693761148,5.03283690107653,8.57477431653447,4.11761400035207,5.96044064343795,17.3081447308755,17.7227432609493,10.7024436945036,14.17446603783,18.350365694905,15.9830924413194,17.7029788618206,21.154719294864,0.453460767230423,0,0.0897138566094757,0,0,0,0,0.857473516316263,0,0.564751842617067,0.920650473014354,0.572895513439397,1.71853182343688,0.685082519770642,0.755393897389701,2.02506750069542,1.80128481289688,1.35942722695261,1.03552062350364,1.3492355185943,0.399024873401031,0.512200817262403,0.972426868273176,0.209613162627982,0.367687016900028,0.44449345560323,0.206035057238894,0.64183841918363,0.758091635291392,0,0.188626341386076,0.749132059759059,1.53660365771686,1.37845125493472,0,1.73826488917283,1.54327376370964,0.412085900803307,0.441596760403192,1.37147700954166,2.48466128623072,1.66905332963125,0.581385666529314,1.12931256498397,1.35383372626682,1.64635175585495,0,1.7654534799962,0,0.355905054372522,1.37906275325789,0.409231043169689,2.01417893541756,0.964533054905707,0.999242311751784,0.701794825336225,0,0.191288332068843,0,0
|phase1_expression=0.80074423552397,0.348975407639361,1.36499771816861,0,0,0.503637815735669,0.467225281191051,6.45616617207881,3.66050677594334,1.87251621057595,1.19852577757853,1.67521533890206,5.9920255475922,6.29426897416781,0,0,0,0,0.274228867211478,0.42438965179803,1.9559956734746,0.496454756004426,0.261199789138935,1.59992422793407,0.45881856213434,0,0,0.646413698057667,1.14014051673824,1.51218077855958,1.55211357458713,0,0,0,0.866554859253824,1.32987716286794,2.45003227514843,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,5.07753499407941,4.7053131879945,0,0,0,0.404632921719196,0.528990979272033,0,0,0,0,0,0,0,0,4.25127410464758,4.3201900266141,3.57552434297349,0.285650984403804,0,4.04219637409348,24.2489041676138,0.919218786610021,0,0.383062014255563,0.46081959976873,0.395658863190582,1.73826522844578,2.08365348222704,0,0,0,2.06240009831567,1.56608848879013,1.4911955666024,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0.258937883647172,0,0.346970653532272,0,0.230615497256059,0,0.117588707135705,0,0,0,0,0,0,0,1.86391761218122,0,0.209446706813455,0.510914110417183,0,0,0,0.149790639404823,3.66000482254901,20.356005042284,0.521472960576829,2.55715457330331,0,3.0825839982874,0.305518091550949,0,0,0,0.260240885925407,0.229902104433473,0.180062129805349,0.753524089178575,0.340182495756639,0.512454881139399,0.374806898238915,0,0.215567992932842,0.189106080167819,0.527853372491847,0.657587197282725,0.834141747676794,0.696504333044333,1.4404749548556,0,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0.23674473558521,0.393528463494808,0.154267112887378,0,0,0.350296027101508,0,0.656669856316381,0,0.146199987425332,0,0,2.3131894342054,4.83651678182637,0.330418782983798,0,0.426576501070468,0,0.515469845288373,1.00841762311671,0.889512175379481,0.380451252225118,1.42358718463353,0.988193728344065,2.5133520880027,0.397912944082302,0.974820435595601,0,1.08069024937347,1.99141273254367,0,0.114248512609729,0,0,0,0,0.0632365371242573,0.295220295959204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0.318909537314974,0.491589944147214,0.518054945597687,0.289298117163023,0,0,0,0.275936746304732,0.160550589987792,0,0,0,0,0,0.215423397732799,0,0,0,0.404810701674894,0.292255857911312,0,0.963963949265421,0,0,0,0,0,0.971122544619926,0.302323556964751,0.377210159511796,0,0,0,0,0,0,0,0,0,0.18006109403131,0.776152102696527,2.14337035031592,0.709360934569094,0.535106452806212,0.658196082408484,0.608929898229199,0,0,0,1.48397627647332,2.26050197374268,1.44751019827574,2.14870219205646,0.328281799490123,0,0,0,0,0,0.941842285023455,0.683471138605126,0.686334519619568,0,0,0,0,0,0.203319467126849,0.648032044930808,0.418176592028937,0.436725127492355,1.21377911746339,0.247960367176008,0,0.648074866458964,0.621339313086926,0,0.299033092087958,0.330916980914195,0,0,0,0.117357238645754,0,0,0,0,2.52808896502543,1.82452693761148,5.03283690107653,8.57477431653447,4.11761400035207,5.96044064343795,17.3081447308755,17.7227432609493,10.7024436945036,14.17446603783,18.350365694905,15.9830924413194,17.7029788618206,21.154719294864,0.453460767230423,0,0.0897138566094757,0,0,0,0,0.857473516316263,0,0.564751842617067,0.920650473014354,0.572895513439397,1.71853182343688,0.685082519770642,0.755393897389701,2.02506750069542,1.80128481289688,1.35942722695261,1.03552062350364,1.3492355185943,0.399024873401031,0.512200817262403,0.972426868273176,0.209613162627982,0.367687016900028,0.44449345560323,0.206035057238894,0.64183841918363,0.758091635291392,0,0.188626341386076,0.749132059759059,1.53660365771686,1.37845125493472,0,1.73826488917283,1.54327376370964,0.412085900803307,0.441596760403192,1.37147700954166,2.48466128623072,1.66905332963125,0.581385666529314,1.12931256498397,1.35383372626682,1.64635175585495,0,1.7654534799962,0,0.355905054372522,1.37906275325789,0.409231043169689,2.01417893541756,0.964533054905707,0.999242311751784,0.701794825336225,0,0.191288332068843,0,0
|short_description=p4@Bcl11b
|short_description=p4@Bcl11b
}}
}}

Latest revision as of 06:46, 26 September 2015

Short description:p4@Bcl11b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Bcl11b_5end
Coexpression cluster:MCL_coexpression_mm9:1318
Association with transcript: -40bp_to_ENSMUST00000066060_5end
EntrezGene:Bcl11b
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Bcl11b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E96.46
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.66
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.87
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.20
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.68
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E45.99
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E86.29
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.96
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.60
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B91.14
Ileum epithelium, pool2.CNhs13232.10253-104C11.51
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.45
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.08
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.71
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.25
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.32
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.58
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.04
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F224.25
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.74
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.49
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D83.66
corpus striatum, neonate N00.CNhs11226.630-43F120.36
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F22.56
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B23.08
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B51.44
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E82.31
hippocampus, neonate N00.CNhs11228.627-43G14.84
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B82.51
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G11.99
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.78
pituitary gland, embryo E14.CNhs11037.398-44A52.14
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C31.48
skin, neonate N00.CNhs11124.650-25G42.26
skin, neonate N03.CNhs11215.662-22H31.45
skin, neonate N06.CNhs11097.693-20I52.15
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B81.21
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B52.53
thymus, embryo E14.CNhs11041.402-44I41.82
thymus, embryo E15.CNhs11005.430-45I25.03
thymus, embryo E16.CNhs11002.456-26C58.57
thymus, embryo E17.CNhs10581.478-18C14.12
thymus, embryo E18.CNhs10595.1273-19G45.96
thymus, neonate N02.CNhs11181.1541-43F817.31
thymus, neonate N03.CNhs11137.2104-43C717.72
thymus, neonate N06.CNhs11197.681-26C410.70
thymus, neonate N07.CNhs11211.713-19D314.17
thymus, neonate N10.CNhs11194.748-24E418.35
thymus, neonate N20.CNhs11186.820-7A215.98
thymus, neonate N25.CNhs11125.1362-25G717.70
thymus, neonate N30.CNhs11132.1393-42G221.15
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.72
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I81.35
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.48
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.01
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
mature alpha-beta T cell1.06e-109
alpha-beta T cell1.06e-109
immature T cell1.06e-109
mature T cell1.06e-109
immature alpha-beta T cell1.06e-109
CD4-positive, alpha-beta T cell1.48e-098
T cell2.44e-0811
pro-T cell2.44e-0811
lymphoid lineage restricted progenitor cell1.85e-0712
thymocyte3.73e-076
double negative thymocyte3.73e-076
naive T cell3.73e-076
double-positive, alpha-beta thymocyte3.73e-076
CD4-positive, alpha-beta thymocyte3.73e-076
naive thymus-derived CD4-positive, alpha-beta T cell3.73e-076
DN4 thymocyte3.73e-076
DN1 thymic pro-T cell3.73e-076
DN2 thymocyte3.73e-076
DN3 thymocyte3.73e-076
immature single positive thymocyte3.73e-076
early T lineage precursor3.73e-076
mature CD4 single-positive thymocyte3.73e-076
resting double-positive thymocyte3.73e-076
double-positive blast3.73e-076
CD69-positive double-positive thymocyte3.73e-076
CD69-positive, CD4-positive single-positive thymocyte3.73e-076
CD4-positive, CD8-intermediate double-positive thymocyte3.73e-076
CD24-positive, CD4 single-positive thymocyte3.73e-076

Uber anatomy
Ontology termp-valuen
thymus2.30e-2023
neck2.30e-2023
respiratory system epithelium2.30e-2023
hemolymphoid system gland2.30e-2023
pharyngeal epithelium2.30e-2023
thymic region2.30e-2023
pharyngeal gland2.30e-2023
entire pharyngeal arch endoderm2.30e-2023
thymus primordium2.30e-2023
early pharyngeal endoderm2.30e-2023
pharynx3.14e-1924
gland of gut3.14e-1924
upper respiratory tract3.14e-1924
chordate pharynx3.14e-1924
pharyngeal arch system3.14e-1924
pharyngeal region of foregut3.14e-1924
segment of respiratory tract2.44e-1627
hemopoietic organ9.43e-1529
immune organ9.43e-1529
mixed endoderm/mesoderm-derived structure4.06e-1135
craniocervical region1.23e-1036
anterior region of body8.78e-0943
respiratory tract1.35e-0841
gray matter1.87e-0834
respiratory system2.98e-0842
brain grey matter2.16e-0729
regional part of telencephalon2.16e-0729
telencephalon2.16e-0729
hematopoietic system2.57e-0745
blood island2.57e-0745
hemolymphoid system2.81e-0748
immune system2.81e-0748
gut epithelium5.85e-0755
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