FFCP PHASE1:Hg19::chr10:96500282..96500285,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:96500282..96500285,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr10:96500282..96500285,+ | |description=CAGE_peak_at_chr10:96500282..96500285,+ | ||
|id=chr10:96500282..96500285,+ | |id=chr10:96500282..96500285,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.20e-17;12!CL:0002178;1.35e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.09e-17,12;CL:0002178,1.51e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!5.18e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;5.84e-24;22!UBERON:0002108;1.13e-18;4!UBERON:0000945;2.11e-18;5!UBERON:0010039;2.11e-18;5!UBERON:0004921;2.54e-13;33!UBERON:0000160;1.09e-11;17!UBERON:0002107;3.09e-11;19!UBERON:0006925;3.09e-11;19!UBERON:0001007;7.52e-10;81!UBERON:0002114;1.04e-08;2!UBERON:0002423;1.09e-08;25!UBERON:0001555;1.62e-07;54!UBERON:0002365;2.44e-07;31!UBERON:0002330;2.44e-07;31!UBERON:0001041;3.44e-07;14!UBERON:0002368;5.47e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,3.31e-21,25;UBERON:0002108,1.24e-18,4;UBERON:0000945,7.68e-12,8;UBERON:0010039,7.68e-12,8;UBERON:0000160,1.07e-11,17;UBERON:0004921,1.15e-11,118;UBERON:0002107,2.98e-11,19;UBERON:0006925,2.98e-11,19;UBERON:0008836,2.98e-11,19;UBERON:0008835,8.34e-10,22;UBERON:0003894,8.34e-10,22;UBERON:0001007,1.85e-09,145;UBERON:0001555,1.85e-09,145;UBERON:0007026,1.85e-09,145;UBERON:0009854,2.09e-09,23;UBERON:0007499,1.06e-08,25;UBERON:0009497,1.06e-08,25;UBERON:0000015,1.06e-08,25;UBERON:0002423,1.06e-08,25;UBERON:0006235,1.06e-08,25;UBERON:0004161,1.06e-08,25;UBERON:0002114,1.12e-08,2;UBERON:0004119,1.50e-08,160;UBERON:0000925,1.50e-08,160;UBERON:0006595,1.50e-08,160;UBERON:0009856,2.17e-08,26;UBERON:0002365,3.95e-07,31;UBERON:0002330,3.95e-07,31 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,4.91413608338813,4.13552934676983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0.088048434013226,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50630081242847,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0.383010740264733,0,0,0.280797178113459,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0.23056390438806,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,1.59223616106011,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0.85381197895741,0,1.44090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788662062837943,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.731507549893617,0,0,0,0,0,0,0,0,0,0,2.16087642702245,0.437119121007915,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46067277649303,0,0,0,0,0,2.1161073620616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0.202056159043763,0,0,0,0,0,0.269475606319761,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,4.91413608338813,4.13552934676983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0.088048434013226,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50630081242847,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0.383010740264733,0,0,0.280797178113459,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0.23056390438806,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,1.59223616106011,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0.85381197895741,0,1.44090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788662062837943,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.731507549893617,0,0,0,0,0,0,0,0,0,0,2.16087642702245,0.437119121007915,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46067277649303,0,0,0,0,0,2.1161073620616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0.202056159043763,0,0,0,0,0,0.269475606319761,0,0,0,0,0,0 | ||
|short_description=p@chr10:96500282..96500285,+ | |short_description=p@chr10:96500282..96500285,+ | ||
}} | }} |
Latest revision as of 16:57, 23 July 2015
Short description: | p@chr10:96500282..96500285, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:96500282..96500285, + |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.09e-17 | 12 |
epithelial cell of stomach | 1.51e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 3.31e-21 | 25 |
small intestine | 1.24e-18 | 4 |
stomach | 7.68e-12 | 8 |
food storage organ | 7.68e-12 | 8 |
intestine | 1.07e-11 | 17 |
subdivision of digestive tract | 1.15e-11 | 118 |
liver | 2.98e-11 | 19 |
digestive gland | 2.98e-11 | 19 |
liver bud | 2.98e-11 | 19 |
hepatic diverticulum | 8.34e-10 | 22 |
liver primordium | 8.34e-10 | 22 |
digestive system | 1.85e-09 | 145 |
digestive tract | 1.85e-09 | 145 |
primitive gut | 1.85e-09 | 145 |
digestive tract diverticulum | 2.09e-09 | 23 |
epithelial sac | 1.06e-08 | 25 |
epithelium of foregut-midgut junction | 1.06e-08 | 25 |
anatomical boundary | 1.06e-08 | 25 |
hepatobiliary system | 1.06e-08 | 25 |
foregut-midgut junction | 1.06e-08 | 25 |
septum transversum | 1.06e-08 | 25 |
duodenum | 1.12e-08 | 2 |
endoderm-derived structure | 1.50e-08 | 160 |
endoderm | 1.50e-08 | 160 |
presumptive endoderm | 1.50e-08 | 160 |
sac | 2.17e-08 | 26 |
exocrine gland | 3.95e-07 | 31 |
exocrine system | 3.95e-07 | 31 |