FFCP PHASE1:Hg19::chr10:95353783..95353794,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:95353783..95353794,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr10:95353783..95353794,- | |description=CAGE_peak_at_chr10:95353783..95353794,- | ||
|id=chr10:95353783..95353794,- | |id=chr10:95353783..95353794,- | ||
|ontology_enrichment_celltype=CL:0000181!2.72e-15!12;CL:0000417!2.72e-15!12;CL:0000668!2.72e-15!12;CL:0000414!2.72e-15!12;CL:0000412!2.72e-15!12;CL:0000182!2.72e-15!12;CL:0000136!1.26e-08!15 | |ontology_enrichment_celltype=CL:0000181!2.72e-15!12;CL:0000417!2.72e-15!12;CL:0000668!2.72e-15!12;CL:0000414!2.72e-15!12;CL:0000412!2.72e-15!12;CL:0000182!2.72e-15!12;CL:0000136!1.26e-08!15 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.99e-19;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.09e-19,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.06e-10;11!UBERON:0009497;1.26e-08;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009854!3.40e-17!23;UBERON:0002107!9.09e-17!19;UBERON:0006925!9.09e-17!19;UBERON:0008836!9.09e-17!19;UBERON:0009856!4.98e-15!26;UBERON:0008835!2.61e-14!22;UBERON:0003894!2.61e-14!22;UBERON:0007499!1.93e-12!25;UBERON:0009497!1.93e-12!25;UBERON:0000015!1.93e-12!25;UBERON:0002423!1.93e-12!25;UBERON:0006235!1.93e-12!25;UBERON:0004161!1.93e-12!25;UBERON:0005057!6.49e-12!26;UBERON:0002368!9.57e-11!35;UBERON:0002365!8.65e-10!31;UBERON:0002330!8.65e-10!31;UBERON:0003929!1.41e-09!54;UBERON:0002530!1.23e-08!59;UBERON:0000949!5.14e-08!45;UBERON:0002417!8.89e-07!61;UBERON:0000916!8.89e-07!61;UBERON:0007029!9.67e-07!1;UBERON:0005911!9.89e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.02e-32;19!UBERON:0006925;1.02e-32;19!UBERON:0002423;5.64e-25;25!UBERON:0002365;3.67e-20;31!UBERON:0002330;3.67e-20;31!UBERON:0002368;1.96e-17;33!UBERON:0000949;1.14e-12;43!UBERON:0005172;3.63e-09;52!UBERON:0005173;3.63e-09;52!UBERON:0002417;4.10e-07;58!UBERON:0000916;4.10e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.05e-32,19;UBERON:0006925,1.05e-32,19;UBERON:0008836,1.05e-32,19;UBERON:0008835,2.61e-28,22;UBERON:0003894,2.61e-28,22;UBERON:0009854,4.25e-27,23;UBERON:0007499,5.78e-25,25;UBERON:0009497,5.78e-25,25;UBERON:0000015,5.78e-25,25;UBERON:0002423,5.78e-25,25;UBERON:0006235,5.78e-25,25;UBERON:0004161,5.78e-25,25;UBERON:0009856,5.08e-24,26;UBERON:0002365,3.29e-20,31;UBERON:0002330,3.29e-20,31;UBERON:0002368,6.10e-18,35;UBERON:0000949,5.03e-14,45;UBERON:0003929,9.86e-12,54;UBERON:0005172,9.86e-12,54;UBERON:0005173,9.86e-12,54;UBERON:0002530,9.29e-11,59;UBERON:0002417,1.39e-10,60;UBERON:0000916,1.39e-10,60;UBERON:0005911,8.56e-08,82;UBERON:0001041,2.36e-07,87 | |||
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|short_description=p@chr10:95353783..95353794,- | |short_description=p@chr10:95353783..95353794,- | ||
}} | }} |
Latest revision as of 16:53, 23 July 2015
Short description: | p@chr10:95353783..95353794, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:95353783..95353794, - |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.09e-19 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 1.05e-32 | 19 |
digestive gland | 1.05e-32 | 19 |
liver bud | 1.05e-32 | 19 |
hepatic diverticulum | 2.61e-28 | 22 |
liver primordium | 2.61e-28 | 22 |
digestive tract diverticulum | 4.25e-27 | 23 |
epithelial sac | 5.78e-25 | 25 |
epithelium of foregut-midgut junction | 5.78e-25 | 25 |
anatomical boundary | 5.78e-25 | 25 |
hepatobiliary system | 5.78e-25 | 25 |
foregut-midgut junction | 5.78e-25 | 25 |
septum transversum | 5.78e-25 | 25 |
sac | 5.08e-24 | 26 |
exocrine gland | 3.29e-20 | 31 |
exocrine system | 3.29e-20 | 31 |
endocrine gland | 6.10e-18 | 35 |
endocrine system | 5.03e-14 | 45 |
gut epithelium | 9.86e-12 | 54 |
abdomen element | 9.86e-12 | 54 |
abdominal segment element | 9.86e-12 | 54 |
gland | 9.29e-11 | 59 |
abdominal segment of trunk | 1.39e-10 | 60 |
abdomen | 1.39e-10 | 60 |
endo-epithelium | 8.56e-08 | 82 |
foregut | 2.36e-07 | 87 |