FFCP PHASE1:Hg19::chr10:8111510..8111523,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:8111510..8111523,+ | |||
|coexpression_cluster_id=C1124 | |||
|description=CAGE_peak_at_chr10:8111510..8111523,+ | |description=CAGE_peak_at_chr10:8111510..8111523,+ | ||
|id=chr10:8111510..8111523,+ | |id=chr10:8111510..8111523,+ | ||
|ontology_enrichment_celltype=CL:0000084!2.72e-11!25;CL:0000827!2.72e-11!25;CL:0000838!2.70e-08!52;CL:0002541!4.38e-08!3;CL:0000542!4.67e-08!53;CL:0000051!4.67e-08!53;CL:0000623!7.22e-07!3;CL:0000825!7.22e-07!3 | |ontology_enrichment_celltype=CL:0000084!2.72e-11!25;CL:0000827!2.72e-11!25;CL:0000838!2.70e-08!52;CL:0002541!4.38e-08!3;CL:0000542!4.67e-08!53;CL:0000051!4.67e-08!53;CL:0000623!7.22e-07!3;CL:0000825!7.22e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000349;1.74e-29;19!CL:0002537;1.96e-21;5!CL:0002541;9.25e-17;3!CL:0000039;1.21e-07;7!CL:0000586;1.21e-07;7!CL:0002536;4.17e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.35e-29,19;CL:0002537,1.11e-21,5;CL:0002541,1.37e-16,3;CL:0000039,1.13e-07,7;CL:0000586,1.13e-07,7;CL:0002536,3.48e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0005754;6.05e-13;1!UBERON:0007297;4.17e-07;2 | |||
|ontology_enrichment_disease=DOID:5093!1.98e-10!4;DOID:1612!1.98e-10!4 | |||
|ontology_enrichment_disease_v019=DOID:5093;1.08e-27;4!DOID:1612;1.08e-27;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.08e-27,4;DOID:1612,1.08e-27,4 | |||
|ontology_enrichment_uberon=UBERON:0005631!1.55e-18!14;UBERON:0000158!1.55e-18!14;UBERON:0003124!7.06e-12!7;UBERON:0000478!1.79e-11!24;UBERON:0000305!1.82e-08!7;UBERON:0000476!4.38e-08!3;UBERON:0000920!4.38e-08!3;UBERON:0004871!2.46e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.86e-41;10!UBERON:0000158;1.86e-41;10!UBERON:0000305;1.11e-26;7!UBERON:0000478;3.04e-23;24!UBERON:0003124;9.25e-17;3!UBERON:0000920;9.25e-17;3!UBERON:0000998;6.05e-13;1!UBERON:0006868;6.05e-13;1!UBERON:0000310;1.86e-11;10!UBERON:0001443;1.83e-10;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.55e-40,14;UBERON:0000158,2.55e-40,14;UBERON:0000305,5.32e-27,7;UBERON:0004871,1.13e-23,8;UBERON:0000478,2.48e-23,24;UBERON:0000920,1.37e-16,3;UBERON:0003124,9.19e-16,7;UBERON:0000998,5.38e-13,1;UBERON:0006868,5.38e-13,1;UBERON:0000310,1.86e-11,10;UBERON:0001443,1.83e-10,11;UBERON:0004923,4.17e-08,66 | |||
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| ||
|short_description=p@chr10:8111510..8111523,+ | |short_description=p@chr10:8111510..8111523,+ | ||
}} | }} |
Latest revision as of 16:02, 23 July 2015
Short description: | p@chr10:8111510..8111523, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:8111510..8111523, + |
Coexpression cluster: | C1124_MCF7_breast_chorionic_nasal_choriocarcinoma_seminal_amniotic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.35e-29 | 19 |
amnion mesenchymal stem cell | 1.11e-21 | 5 |
chorionic membrane mesenchymal stem cell | 1.37e-16 | 3 |
germ line cell | 1.13e-07 | 7 |
germ cell | 1.13e-07 | 7 |
amniotic epithelial cell | 3.48e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.55e-40 | 14 |
membranous layer | 2.55e-40 | 14 |
amnion | 5.32e-27 | 7 |
somatic layer of lateral plate mesoderm | 1.13e-23 | 8 |
extraembryonic structure | 2.48e-23 | 24 |
egg chorion | 1.37e-16 | 3 |
chorion | 9.19e-16 | 7 |
seminal vesicle | 5.38e-13 | 1 |
seminal fluid secreting gland | 5.38e-13 | 1 |
breast | 1.86e-11 | 10 |
chest | 1.83e-10 | 11 |
organ component layer | 4.17e-08 | 66 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.08e-27 | 4 |
breast cancer | 1.08e-27 | 4 |