FFCP PHASE1:Hg19::chr10:49813013..49813032,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=58504 | |EntrezGene=58504 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30320 | |HGNC=30320 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-13bp_to_ENST00000491108_5end | |association_with_transcript=-13bp_to_ENST00000491108_5end | ||
|cluster_id=chr10:49813013..49813032,- | |||
|coexpression_cluster_id=C2062 | |||
|description=CAGE_peak_3_at_ARHGAP22_5end | |description=CAGE_peak_3_at_ARHGAP22_5end | ||
|id=chr10:49813013..49813032,- | |id=chr10:49813013..49813032,- | ||
|ontology_enrichment_celltype=CL:0000055!9.04e-34!180;CL:0000680!1.10e-25!57;CL:0000056!1.10e-25!57;CL:0000355!1.10e-25!57;CL:0000192!3.43e-24!42;CL:0000514!3.43e-24!42;CL:0000359!4.31e-24!32;CL:0000183!6.38e-24!59;CL:0000187!3.86e-23!54;CL:0000222!1.12e-19!119;CL:0000393!4.38e-19!60;CL:0000211!4.38e-19!60;CL:0000057!9.69e-17!75;CL:0000048!2.21e-16!430;CL:0000723!1.85e-15!436;CL:0002371!3.00e-15!591;CL:0000034!2.79e-14!444;CL:0002620!4.57e-12!23;CL:0000144!8.51e-12!625;CL:0002539!5.00e-11!10;CL:0000220!1.27e-07!246;CL:0000548!1.56e-07!679;CL:0000004!1.56e-07!679;CL:0000255!1.56e-07!679;CL:0002321!2.25e-07!248;CL:0000012!3.05e-07!682 | |ontology_enrichment_celltype=CL:0000055!9.04e-34!180;CL:0000680!1.10e-25!57;CL:0000056!1.10e-25!57;CL:0000355!1.10e-25!57;CL:0000192!3.43e-24!42;CL:0000514!3.43e-24!42;CL:0000359!4.31e-24!32;CL:0000183!6.38e-24!59;CL:0000187!3.86e-23!54;CL:0000222!1.12e-19!119;CL:0000393!4.38e-19!60;CL:0000211!4.38e-19!60;CL:0000057!9.69e-17!75;CL:0000048!2.21e-16!430;CL:0000723!1.85e-15!436;CL:0002371!3.00e-15!591;CL:0000034!2.79e-14!444;CL:0002620!4.57e-12!23;CL:0000144!8.51e-12!625;CL:0002539!5.00e-11!10;CL:0000220!1.27e-07!246;CL:0000548!1.56e-07!679;CL:0000004!1.56e-07!679;CL:0000255!1.56e-07!679;CL:0002321!2.25e-07!248;CL:0000012!3.05e-07!682 | ||
|ontology_enrichment_celltype_v019=CL:0000359;4.25e-35;32!CL:0000192;1.55e-23;43!CL:0002539;1.35e-18;10!CL:0000187;5.23e-13;55!CL:0002620;8.80e-12;23!CL:0000393;3.76e-10;61!CL:0000211;3.76e-10;61!CL:0002551;1.24e-09;6!CL:0002594;1.64e-08;4!CL:0000056;2.03e-08;4!CL:0002540;4.68e-07;6!CL:1000306;6.38e-07;4!CL:0002547;6.38e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,3.43e-37,32;CL:0000192,5.66e-32,43;CL:0000514,5.66e-32,43;CL:0000680,1.69e-30,58;CL:0000056,1.69e-30,58;CL:0000355,1.69e-30,58;CL:0000187,1.82e-26,55;CL:0000393,7.98e-23,61;CL:0000211,7.98e-23,61;CL:0002539,1.30e-18,10;CL:0000222,3.12e-17,121;CL:0000048,1.85e-15,427;CL:0000723,6.79e-15,433;CL:0000034,3.63e-14,441;CL:0002620,5.62e-12,23;CL:0000057,4.60e-10,76;CL:0002551,7.96e-10,6;CL:0002594,1.61e-08,4;CL:0000515,2.12e-08,4;CL:0002540,4.96e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000514;1.55e-23;43!CL:0000355;5.48e-16;58!CL:0000515;2.03e-08;4 | |||
|ontology_enrichment_disease=DOID:2394!6.89e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;3.63e-10;14!DOID:0060084;5.33e-07;3!DOID:127;5.33e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.19e-10,14;DOID:0060084,5.26e-07,3;DOID:127,5.26e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0001637!4.65e-34!42;UBERON:0003509!4.65e-34!42;UBERON:0004572!4.65e-34!42;UBERON:0000055!4.40e-30!69;UBERON:0000914!5.54e-30!83;UBERON:0002329!5.54e-30!83;UBERON:0003077!5.54e-30!83;UBERON:0003059!5.54e-30!83;UBERON:0007282!5.54e-30!83;UBERON:0009618!5.54e-30!83;UBERON:0007285!5.54e-30!83;UBERON:0001981!2.00e-28!60;UBERON:0007500!2.00e-28!60;UBERON:0004537!2.00e-28!60;UBERON:0006965!2.00e-28!60;UBERON:0002049!3.38e-28!79;UBERON:0007798!3.38e-28!79;UBERON:0004290!7.33e-28!70;UBERON:0004573!1.48e-27!33;UBERON:0004571!1.48e-27!33;UBERON:0000486!2.29e-23!82;UBERON:0001134!9.54e-23!61;UBERON:0002036!9.54e-23!61;UBERON:0003082!9.54e-23!61;UBERON:0002385!1.98e-21!63;UBERON:0001015!1.98e-21!63;UBERON:0000383!1.98e-21!63;UBERON:0004872!2.42e-19!84;UBERON:0004535!6.47e-18!110;UBERON:0000947!2.95e-17!21;UBERON:0010191!2.95e-17!21;UBERON:0005256!7.21e-17!143;UBERON:0001009!7.81e-17!113;UBERON:0003914!5.36e-14!118;UBERON:0000490!1.82e-11!138;UBERON:0004237!5.00e-11!10;UBERON:0004695!5.00e-11!10;UBERON:0002111!5.00e-11!10;UBERON:0004178!5.00e-11!10;UBERON:0002204!8.93e-11!167;UBERON:0002199!1.16e-09!45;UBERON:0002416!1.16e-09!45;UBERON:0002097!1.14e-08!40;UBERON:0000467!2.00e-08!625;UBERON:0000480!2.53e-08!626;UBERON:0002100!2.93e-08!216;UBERON:0001135!4.85e-08!15;UBERON:0000119!5.11e-08!312;UBERON:0000475!8.03e-08!365;UBERON:0004111!8.24e-08!241;UBERON:0000483!1.10e-07!309;UBERON:0003102!1.61e-07!95;UBERON:0000468!2.56e-07!659;UBERON:0000025!2.59e-07!194;UBERON:0000477!8.11e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;4.70e-36;33!UBERON:0004571;4.70e-36;33!UBERON:0001637;5.83e-33;42!UBERON:0003509;5.83e-33;42!UBERON:0004572;5.83e-33;42!UBERON:0000947;1.22e-23;21!UBERON:0010191;1.22e-23;21!UBERON:0007500;4.04e-19;56!UBERON:0001981;4.04e-19;56!UBERON:0004537;4.04e-19;56!UBERON:0004237;1.35e-18;10!UBERON:0004695;1.35e-18;10!UBERON:0002111;1.35e-18;10!UBERON:0004178;1.35e-18;10!UBERON:0000055;7.22e-13;65!UBERON:0003914;4.57e-12;74!UBERON:0001135;1.79e-11;15!UBERON:0002067;1.01e-10;9!UBERON:0002049;3.53e-10;75!UBERON:0007798;3.53e-10;75!UBERON:0002385;3.91e-10;31!UBERON:0001015;3.91e-10;31!UBERON:0000383;3.91e-10;31!UBERON:0001310;1.64e-08;4!UBERON:0002097;3.93e-08;41!UBERON:0002199;1.25e-07;46!UBERON:0002416;1.25e-07;46!UBERON:0004797;6.38e-07;4!UBERON:0000415;6.38e-07;4!UBERON:0007240;6.38e-07;4!UBERON:0005742;6.38e-07;4!UBERON:0005734;6.38e-07;4!UBERON:0004664;6.38e-07;4!UBERON:0004663;6.38e-07;4!UBERON:0000992;6.68e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,4.15e-47,42;UBERON:0003509,4.15e-47,42;UBERON:0004572,4.15e-47,42;UBERON:0004573,2.14e-39,33;UBERON:0004571,2.14e-39,33;UBERON:0002329,1.34e-36,71;UBERON:0003059,1.34e-36,71;UBERON:0007282,1.34e-36,71;UBERON:0004290,1.34e-36,71;UBERON:0009618,1.34e-36,71;UBERON:0003077,6.84e-36,72;UBERON:0007285,6.84e-36,72;UBERON:0007524,3.33e-35,73;UBERON:0007500,7.18e-34,59;UBERON:0001981,7.18e-34,59;UBERON:0004537,7.18e-34,59;UBERON:0006965,7.18e-34,59;UBERON:0007503,1.12e-33,78;UBERON:0000055,1.72e-29,68;UBERON:0000486,2.93e-29,83;UBERON:0001134,8.98e-28,62;UBERON:0002036,8.98e-28,62;UBERON:0003082,8.98e-28,62;UBERON:0002385,1.53e-26,64;UBERON:0001015,1.53e-26,64;UBERON:0000383,1.53e-26,64;UBERON:0004872,1.45e-24,83;UBERON:0002049,4.13e-24,78;UBERON:0007798,4.13e-24,78;UBERON:0000947,1.99e-23,21;UBERON:0010191,1.99e-23,21;UBERON:0004237,1.30e-18,10;UBERON:0004695,1.30e-18,10;UBERON:0002111,1.30e-18,10;UBERON:0004178,1.30e-18,10;UBERON:0005256,1.37e-17,122;UBERON:0000490,4.28e-17,148;UBERON:0004535,8.45e-17,109;UBERON:0000926,1.60e-16,315;UBERON:0004120,1.60e-16,315;UBERON:0006603,1.60e-16,315;UBERON:0003914,1.64e-16,117;UBERON:0001009,5.06e-16,112;UBERON:0003104,4.12e-13,160;UBERON:0009142,4.12e-13,160;UBERON:0002199,2.40e-12,46;UBERON:0002416,2.40e-12,46;UBERON:0001135,1.74e-11,15;UBERON:0002067,6.10e-11,9;UBERON:0004016,6.10e-11,9;UBERON:0010083,6.10e-11,9;UBERON:0002097,3.27e-10,41;UBERON:0002204,3.12e-09,167;UBERON:0001310,1.61e-08,4;UBERON:0002100,1.65e-07,199;UBERON:0003081,4.01e-07,203;UBERON:0000992,4.49e-07,13;UBERON:0002119,7.80e-07,4 | |||
|phase1_expression=0,0.856402095563933,0,1.0007329835313,0,0,0,3.79031924056099,0,0.245733936501509,0.697801167972428,0,0,0.123766352960047,0,30.2546315903299,24.7104756489831,27.0214733443328,28.3001023298494,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0.232429036905685,0.411167888021826,0,0,0,0,0,0,0,0.188242339542605,0.272906150057846,0.449446968890169,0,0.320929027076094,0,0,0.199463657621632,0,0,0,0,0,0.521482918420201,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,1.00267582127178,0.144846518960824,9.54343136461319,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,1.19257444420023,3.4409383804245,1.38856200643038,1.69592382577203,2.09749718104953,0.275118041940067,1.04497483268405,0,0.35576626268671,0.33472061276467,0,0,0.24406205754817,0.367663080345869,0.81014194788176,0,0.22452937262617,0.337834441449967,0,0,0.549605231791222,0,0,0,0,2.02608818663328,5.16395805171553,2.0078563452417,1.06400514659507,0,0,1.2333377420858,0,0,0,0.151357427644931,0.576175924479999,0,7.17968176709737,6.84566185853339,5.67904986096844,1.52664848236894,1.94247533241758,1.40450806702248,2.24569588380383,0.245668634623536,0.103325781175765,0,0.741800787835671,0.910161361938026,2.87447256726495,0.673344455816265,0.375355559615893,4.15596173226274,0,0.30648779579902,0.45071417671979,0.340296549480063,1.79389635688862,0.213557388818567,1.05965950579781,1.50045548042201,1.33968288009971,0.257640540045629,0.18611685633159,1.85653965465393,0.68205903612839,0.504867548488229,0.644349290496095,0,2.13005755509969,3.72782763442269,1.3564847384839,0.386521706326594,0.545492241181669,0.286804595389004,0,0,0,0,0,0,1.56449532329816,0,5.52539685409922,0,2.16563844500876,0,0,0,0,0,0,0,0,0,0,2.80483547606892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577465791044295,0.462985512576611,0.190254152234598,0,0,0,0,0.148631162288728,0,1.17587489739202,0.141775097242386,0.53735113621709,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.560655421726804,0,0.7333828582095,1.55126058909333,0,0.845302752556,0.531876233169741,0,1.28603687131071,1.41849132023278,3.99633268524149,0,0,0.823240336780769,1.95441710576241,0,0,0.301439377059586,0,0,0,0,0,0.479249710983165,0,48.4965477138443,15.7811624267661,3.6985738059069,22.5616813682268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62759014219841,0,1.07057393278297,0,0.702848489956279,8.12554469264841,9.09630016223939,0,1.32845119707087,5.16233671916769,0.955719759148911,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0.804269605718038,0,6.63101683351419,7.63515418846446,12.0726919340299,2.07701771673448,9.64546141217662,0,0,0.0920809889358963,0.459257792658427,0,0.262248829918848,0,0.0770153371044148,0,0,0.211103257785751,0,0.510281115829547,0,1.54227252690289,0.541892875087706,0,1.01950509218015,0,1.34324852833307,0,0,0,0,0,0,0,0,1.14853107599234,0.650060246036521,0,1.45006077438183,0.308097234229289,0.15350367472613,0.827019434907183,0,0,0.340906509664404,0.0890320356467374,0,0.192190067365106,1.53135254993501,0,13.015675380324,7.24068397710472,16.7288944838544,2.46426864140871,10.1138145760234,13.9189278732012,14.6406133092097,7.01311945035757,0,0.316379424718726,0,4.35026245229268,0,3.5002357271853,3.92474320099615,0,0.274537029736055,0.117812402345686,13.7484087469855,30.1169610228716,2.94880919367287,0,5.60541026151954,8.45201174054043,0.272999822815972,0.141405431953713,2.26016233240486,0.551365343546124,11.2784625791007,16.661133639643,4.05142873986681,0,23.5376037276737,12.0831164258903,8.73256367849948,1.57752487424457,0.0982490410131212,19.6169078314688,3.90237170477658,0,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66963057534359,0,0,0.19924798825107,0,0,0,0,1.55519793830904,0,0,0,0.197286811273867,0,1.11136990144637,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.202203398942031,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0319161948297,0,0,0,0,0,0,0.274083849293502,0.19871461170299,0.0633107959558787,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,16.8329876543651,25.926644736038,25.8004014486433,0,0,1.19271615249795,0,0,0,0.646414781807753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.110929051536852,0.496771223531068,0,0,0,0,0,0,0,1.79105763464249,0.233713309847224,2.77402930751307,34.6607499653413,4.0250864280412,0.889811221596536,1.14420034198462,0.453692771289717,0.466311601748341,7.3927574994817,3.98241917909256,1.79921244865442,1.39736661188633,3.7323558705677,5.58267600571789,4.69570555630561,0.150257608997218,0.761610424337591,5.6961902648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| ||
|short_description=p3@ARHGAP22 | |short_description=p3@ARHGAP22 | ||
}} | }} |
Latest revision as of 09:10, 18 September 2015
Short description: | p3@ARHGAP22 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ARHGAP22_5end |
Coexpression cluster: | C2062_Myoblast_mesenchymal_Smooth_leiomyoma_Preadipocyte_Aortic_Fibroblast |
Association with transcript: | -13bp_to_ENST00000491108_5end |
EntrezGene: | ARHGAP22 |
HGNC: | 30320 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 3.43e-37 | 32 |
smooth muscle cell | 5.66e-32 | 43 |
smooth muscle myoblast | 5.66e-32 | 43 |
muscle precursor cell | 1.69e-30 | 58 |
myoblast | 1.69e-30 | 58 |
multi-potent skeletal muscle stem cell | 1.69e-30 | 58 |
muscle cell | 1.82e-26 | 55 |
electrically responsive cell | 7.98e-23 | 61 |
electrically active cell | 7.98e-23 | 61 |
aortic smooth muscle cell | 1.30e-18 | 10 |
mesodermal cell | 3.12e-17 | 121 |
multi fate stem cell | 1.85e-15 | 427 |
somatic stem cell | 6.79e-15 | 433 |
stem cell | 3.63e-14 | 441 |
skin fibroblast | 5.62e-12 | 23 |
fibroblast | 4.60e-10 | 76 |
fibroblast of dermis | 7.96e-10 | 6 |
smooth muscle cell of the umbilical artery | 1.61e-08 | 4 |
skeletal muscle myoblast | 2.12e-08 | 4 |
mesenchymal stem cell of the bone marrow | 4.96e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.19e-10 | 14 |
cell type benign neoplasm | 5.26e-07 | 3 |
leiomyoma | 5.26e-07 | 3 |