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FFCP PHASE1:Mm9::chr11:28484219..28484229,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=216613
|EntrezGene=216613
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=36bp_to_ENSMUST00000109501_5end
|association_with_transcript=36bp_to_ENSMUST00000109501_5end
|cluster_id=chr11:28484219..28484229,-
|description=CAGE_peak_4_at_Ccdc85a_5end
|description=CAGE_peak_4_at_Ccdc85a_5end
|id=chr11:28484219..28484229,-
|id=chr11:28484219..28484229,-
|ontology_enrichment_celltype=CL:0000540!5.82e-10!33;CL:0000047!5.82e-10!33;CL:0000031!5.82e-10!33;CL:0000404!5.82e-10!33;CL:0000221!1.14e-09!44;CL:0000133!1.14e-09!44;CL:0000117!1.64e-09!23;CL:0000337!1.64e-09!23;CL:0002319!1.93e-09!43;CL:0000393!1.84e-08!39;CL:0000211!1.84e-08!39;CL:0000055!6.73e-08!50
|ontology_enrichment_celltype=CL:0000540!5.82e-10!33;CL:0000047!5.82e-10!33;CL:0000031!5.82e-10!33;CL:0000404!5.82e-10!33;CL:0000221!1.14e-09!44;CL:0000133!1.14e-09!44;CL:0000117!1.64e-09!23;CL:0000337!1.64e-09!23;CL:0002319!1.93e-09!43;CL:0000393!1.84e-08!39;CL:0000211!1.84e-08!39;CL:0000055!6.73e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000117,7.51e-23,23;CL:0000337,7.51e-23,23;CL:0000540,2.99e-17,33;CL:0000047,2.99e-17,33;CL:0000031,2.99e-17,33;CL:0000404,2.99e-17,33;CL:0002319,1.82e-14,43;CL:0000393,4.21e-14,39;CL:0000211,4.21e-14,39;CL:0000221,4.65e-14,44;CL:0000133,4.65e-14,44;CL:0002610,2.51e-10,3;CL:0002614,5.77e-10,3;CL:0002612,6.61e-10,3;CL:0002321,1.41e-07,70
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!5.24e-23!75;UBERON:0001016!5.24e-23!75;UBERON:0001017!6.30e-23!73;UBERON:0005743!6.30e-23!73;UBERON:0004121!1.71e-21!102;UBERON:0000924!1.71e-21!102;UBERON:0006601!1.71e-21!102;UBERON:0001049!1.95e-19!52;UBERON:0005068!1.95e-19!52;UBERON:0006241!1.95e-19!52;UBERON:0007135!1.95e-19!52;UBERON:0002346!5.85e-19!71;UBERON:0003075!5.85e-19!71;UBERON:0007284!5.85e-19!71;UBERON:0000033!6.51e-18!63;UBERON:0000955!9.25e-18!50;UBERON:0006238!9.25e-18!50;UBERON:0002616!1.84e-17!49;UBERON:0003056!7.55e-13!49;UBERON:0003080!9.06e-13!40;UBERON:0002780!4.96e-12!39;UBERON:0001890!4.96e-12!39;UBERON:0006240!4.96e-12!39;UBERON:0002020!3.76e-11!34;UBERON:0004111!9.66e-11!122;UBERON:0000025!1.52e-10!114;UBERON:0007811!2.68e-09!86;UBERON:0002791!5.99e-08!29;UBERON:0003528!5.99e-08!29;UBERON:0001893!5.99e-08!29;UBERON:0003076!9.35e-08!12;UBERON:0003057!9.35e-08!12;UBERON:0000153!1.91e-07!94;UBERON:0002420!4.63e-07!8;UBERON:0007245!4.63e-07!8;UBERON:0010009!4.63e-07!8;UBERON:0010011!4.63e-07!8;UBERON:0000454!4.63e-07!8
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.07e-24,54;UBERON:0001017,2.65e-24,73;UBERON:0001016,1.62e-23,75;UBERON:0001049,1.25e-20,52;UBERON:0005068,1.25e-20,52;UBERON:0006241,1.25e-20,52;UBERON:0007135,1.25e-20,52;UBERON:0004121,1.87e-17,95;UBERON:0000924,1.87e-17,95;UBERON:0006601,1.87e-17,95;UBERON:0002346,6.33e-16,64;UBERON:0003075,6.33e-16,64;UBERON:0007284,6.33e-16,64;UBERON:0010371,2.06e-13,73;UBERON:0002420,4.19e-13,8;UBERON:0007245,4.19e-13,8;UBERON:0010009,4.19e-13,8;UBERON:0010011,4.19e-13,8;UBERON:0000454,4.19e-13,8;UBERON:0002616,5.49e-13,46;UBERON:0002950,6.88e-13,4;UBERON:0001891,6.88e-13,4;UBERON:0009616,6.88e-13,4;UBERON:0010286,6.88e-13,4;UBERON:0000955,1.23e-12,47;UBERON:0006238,1.23e-12,47;UBERON:0002240,3.52e-12,6;UBERON:0005174,3.52e-12,6;UBERON:0001137,3.52e-12,6;UBERON:0002020,3.58e-12,34;UBERON:0003080,1.63e-11,40;UBERON:0003076,3.39e-11,12;UBERON:0003057,3.39e-11,12;UBERON:0004684,2.51e-10,3;UBERON:0002275,2.51e-10,3;UBERON:0000025,4.53e-10,114;UBERON:0002780,5.25e-10,39;UBERON:0001890,5.25e-10,39;UBERON:0006240,5.25e-10,39;UBERON:0002038,5.77e-10,3;UBERON:0009663,5.77e-10,3;UBERON:0009661,5.77e-10,3;UBERON:0000125,5.77e-10,3;UBERON:0002308,5.77e-10,3;UBERON:0002257,6.61e-10,3;UBERON:0001948,7.52e-10,5;UBERON:0002315,7.52e-10,5;UBERON:0010314,1.00e-09,92;UBERON:0004111,4.40e-09,122;UBERON:0003056,7.17e-09,49;UBERON:0011216,2.94e-08,194;UBERON:0001896,8.49e-07,2;UBERON:0002298,8.49e-07,2;UBERON:0005290,8.49e-07,2;UBERON:0010096,8.49e-07,2;UBERON:0003528,8.93e-07,29;UBERON:0002791,8.93e-07,29;UBERON:0001893,8.93e-07,29
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0,0,0,0.65407546914134,0.659058548203415,1.94429899074283,0.139986421625363,0,0,0,0,0,0.286533439938757,0,1.01158230429799,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0,0,0,0,0.856952953211411,1.32521124570968,0.122490799214954,0.0958454710182364,0,4.40463523997555,1.78762273319263,2.4577045320999,0.791317726381163,1.37231465403614,2.08365348222704,2.79182999001381,2.25105044012672,1.37518422999129,1.76777151284201,2.27794689278565,1.86399445825301,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0.34255163915718,0,0.445326417194474,0,0,0.461230994512117,0.301445281105245,0.23517741427141,0,0,0.289198713839823,0,0,0,0.484875253135222,0,0.878342391034642,0.628340120440365,0,0,0,0,2.39665023047716,1.37250180845588,0.502617408451458,0.173824320192276,1.79000820131231,1.45451631191692,1.29793010454206,0,0.124406970610093,0,0,0.130120442962704,0.459804208866946,0.720248519221397,0,0.408218994907967,0,0.468508622798644,0.258703370739016,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0.154267112887378,0,0.268273401399619,0.233530684734339,0,0.164167464079095,0.162137619091711,0.146199987425332,0.219550115291051,0.268412837520744,1.47202963994889,0.308713837137853,0,0,0.426576501070468,0.464473343720877,0,0,0,0,0,0,0.251335208800269,0,0.19496408711912,0,0,0,0,0.114248512609729,0,0.407302655690628,0.581857461502877,0.140271639780637,0.0632365371242573,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0,0,0.169745085775188,0,0.670025029767263,0.714130922658041,3.31727201358258,0.630540576424764,0.664394068946325,2.07291199254733,0.81931657357869,0.863424909329478,1.01254341007058,0,0,0.491764273019036,0,1.60550589987792,1.75817529888305,0,0.504941854408746,0.315508219416257,0,0.430846795465598,0,0.222798674082394,0.566153061577665,0,0.584511715822624,1.18586333383957,0.321321316421807,0.141940085208269,0.178065603667255,0,0,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0,0,0,0,0.340439605753788,0.18006109403131,0.258717367565509,0.214337035031592,0.354680467284547,1.78368817602071,0.822745103010605,1.2178597964584,0,0,0.220528398054962,0,0.322928853391811,0,0,0.164140899745061,0,1.29797711407357,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0.258319646955462,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0.100966449948148,0,0,0,0,0.116876902181569,0.226730383615211,0,0,0,0.19318959403219,0,0.183151624267265,0,0,1.12950368523413,0.920650473014354,0,0.171853182343688,0.685082519770642,0.755393897389701,0.675022500231806,0.45032120322422,0,0.51776031175182,0.103787347584177,0.399024873401031,0,0,0.209613162627982,0,0.44449345560323,0.618105171716683,0.320919209591815,0,0.50695859978048,0.754505365544305,0,0.448176066834085,0.459483751644906,0.476293691283074,0.811190281613988,0.578727661391115,0.412085900803307,0.294397840268795,0.342869252385415,0,0.238436189947321,0,0.282328141245992,0.338458431566706,0,0,0.407412341537585,0,0.474540072496697,0.0985044823755635,0,0.464810523557898,0,0.499621155875892,0,0,0.382576664137687,0,0.231867835620421
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0,0,0,0.65407546914134,0.659058548203415,1.94429899074283,0.139986421625363,0,0,0,0,0,0.286533439938757,0,1.01158230429799,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0,0,0,0,0.856952953211411,1.32521124570968,0.122490799214954,0.0958454710182364,0,4.40463523997555,1.78762273319263,2.4577045320999,0.791317726381163,1.37231465403614,2.08365348222704,2.79182999001381,2.25105044012672,1.37518422999129,1.76777151284201,2.27794689278565,1.86399445825301,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0.34255163915718,0,0.445326417194474,0,0,0.461230994512117,0.301445281105245,0.23517741427141,0,0,0.289198713839823,0,0,0,0.484875253135222,0,0.878342391034642,0.628340120440365,0,0,0,0,2.39665023047716,1.37250180845588,0.502617408451458,0.173824320192276,1.79000820131231,1.45451631191692,1.29793010454206,0,0.124406970610093,0,0,0.130120442962704,0.459804208866946,0.720248519221397,0,0.408218994907967,0,0.468508622798644,0.258703370739016,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0.154267112887378,0,0.268273401399619,0.233530684734339,0,0.164167464079095,0.162137619091711,0.146199987425332,0.219550115291051,0.268412837520744,1.47202963994889,0.308713837137853,0,0,0.426576501070468,0.464473343720877,0,0,0,0,0,0,0.251335208800269,0,0.19496408711912,0,0,0,0,0.114248512609729,0,0.407302655690628,0.581857461502877,0.140271639780637,0.0632365371242573,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0,0,0.169745085775188,0,0.670025029767263,0.714130922658041,3.31727201358258,0.630540576424764,0.664394068946325,2.07291199254733,0.81931657357869,0.863424909329478,1.01254341007058,0,0,0.491764273019036,0,1.60550589987792,1.75817529888305,0,0.504941854408746,0.315508219416257,0,0.430846795465598,0,0.222798674082394,0.566153061577665,0,0.584511715822624,1.18586333383957,0.321321316421807,0.141940085208269,0.178065603667255,0,0,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0,0,0,0,0.340439605753788,0.18006109403131,0.258717367565509,0.214337035031592,0.354680467284547,1.78368817602071,0.822745103010605,1.2178597964584,0,0,0.220528398054962,0,0.322928853391811,0,0,0.164140899745061,0,1.29797711407357,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0.258319646955462,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0.100966449948148,0,0,0,0,0.116876902181569,0.226730383615211,0,0,0,0.19318959403219,0,0.183151624267265,0,0,1.12950368523413,0.920650473014354,0,0.171853182343688,0.685082519770642,0.755393897389701,0.675022500231806,0.45032120322422,0,0.51776031175182,0.103787347584177,0.399024873401031,0,0,0.209613162627982,0,0.44449345560323,0.618105171716683,0.320919209591815,0,0.50695859978048,0.754505365544305,0,0.448176066834085,0.459483751644906,0.476293691283074,0.811190281613988,0.578727661391115,0.412085900803307,0.294397840268795,0.342869252385415,0,0.238436189947321,0,0.282328141245992,0.338458431566706,0,0,0.407412341537585,0,0.474540072496697,0.0985044823755635,0,0.464810523557898,0,0.499621155875892,0,0,0.382576664137687,0,0.231867835620421
|short_description=p4@Ccdc85a
|short_description=p4@Ccdc85a
}}
}}

Latest revision as of 06:09, 27 September 2015

Short description:p4@Ccdc85a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Ccdc85a_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 36bp_to_ENSMUST00000109501_5end
EntrezGene:Ccdc85a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Ccdc85a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.63
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.94
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.79
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.79
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.38
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.86
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.40
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F10.50
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F21.79
diencephalon, adult.CNhs10482.20-12F21.45
diencephalon, neonate N30.CNhs11201.1388-42B21.30
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.41
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C63.32
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E62.07
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H21.01
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.61
medulla oblongata, neonate N30.CNhs11200.1396-42A31.76
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F61.78
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.30
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.07e-2454
central nervous system2.65e-2473
nervous system1.62e-2375
neural tube1.25e-2052
neural rod1.25e-2052
future spinal cord1.25e-2052
neural keel1.25e-2052
ectoderm-derived structure1.87e-1795
ectoderm1.87e-1795
presumptive ectoderm1.87e-1795
neurectoderm6.33e-1664
neural plate6.33e-1664
presumptive neural plate6.33e-1664
ecto-epithelium2.06e-1373
basal ganglion4.19e-138
nuclear complex of neuraxis4.19e-138
aggregate regional part of brain4.19e-138
collection of basal ganglia4.19e-138
cerebral subcortex4.19e-138
regional part of brain5.49e-1346
regional part of midbrain6.88e-134
midbrain6.88e-134
presumptive midbrain6.88e-134
midbrain neural tube6.88e-134
brain1.23e-1247
future brain1.23e-1247
spinal cord3.52e-126
dorsal region element3.52e-126
dorsum3.52e-126
gray matter3.58e-1234
anterior neural tube1.63e-1140
posterior neural tube3.39e-1112
chordal neural plate3.39e-1112
raphe nuclei2.51e-103
reticular formation2.51e-103
tube4.53e-10114
regional part of forebrain5.25e-1039
forebrain5.25e-1039
future forebrain5.25e-1039
substantia nigra5.77e-103
telencephalic nucleus5.77e-103
midbrain nucleus5.77e-103
neural nucleus5.77e-103
nucleus of brain5.77e-103
ventral horn of spinal cord6.61e-103
regional part of spinal cord7.52e-105
gray matter of spinal cord7.52e-105
structure with developmental contribution from neural crest1.00e-0992
anatomical conduit4.40e-09122
pre-chordal neural plate7.17e-0949
organ system subdivision2.94e-08194
medulla oblongata8.49e-072
brainstem8.49e-072
myelencephalon8.49e-072
future myelencephalon8.49e-072
brain grey matter8.93e-0729
regional part of telencephalon8.93e-0729
telencephalon8.93e-0729
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