FFCP PHASE1:Mm9::chr11:119960732..119960781,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:119960732..119960781,- | |||
|description=CAGE_peak_at_chr11:119960732..119960781,- | |description=CAGE_peak_at_chr11:119960732..119960781,- | ||
|id=chr11:119960732..119960781,- | |id=chr11:119960732..119960781,- | ||
|ontology_enrichment_celltype=CL:0002563!2.14e-08!9;CL:0002251!2.14e-08!9;CL:0000239!2.83e-08!6;CL:0000677!2.83e-08!6;CL:0000212!2.83e-08!6;CL:0000584!2.83e-08!6;CL:0000075!7.20e-07!7 | |ontology_enrichment_celltype=CL:0002563!2.14e-08!9;CL:0002251!2.14e-08!9;CL:0000239!2.83e-08!6;CL:0000677!2.83e-08!6;CL:0000212!2.83e-08!6;CL:0000584!2.83e-08!6;CL:0000075!7.20e-07!7 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.03e-15,6;CL:0000677,2.03e-15,6;CL:0000584,2.03e-15,6;CL:0000075,4.24e-13,7;CL:0002563,5.10e-13,9;CL:0002251,5.10e-13,9;CL:0000066,7.42e-12,25;CL:0000223,2.02e-08,20;CL:0000682,2.59e-08,3;CL:0002076,2.33e-07,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!8.56e-16!43;UBERON:0005409!3.92e-15!59;UBERON:0000344!9.68e-15!15;UBERON:0001242!1.04e-12!13;UBERON:0000060!1.04e-12!13;UBERON:0001262!1.04e-12!13;UBERON:0004786!1.04e-12!13;UBERON:0003350!2.14e-08!9;UBERON:0004808!2.14e-08!9;UBERON:0001277!2.14e-08!9;UBERON:0004923!2.35e-08!24;UBERON:0001007!1.09e-07!128;UBERON:0001555!1.09e-07!128;UBERON:0007026!1.09e-07!128;UBERON:0004119!2.29e-07!130;UBERON:0000925!2.29e-07!130;UBERON:0006595!2.29e-07!130;UBERON:0004921!9.92e-07!126;UBERON:0004185!9.92e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.80e-44,31;UBERON:0005409,3.70e-29,47;UBERON:0000344,7.34e-26,15;UBERON:0001242,1.04e-21,13;UBERON:0001262,1.04e-21,13;UBERON:0004786,1.04e-21,13;UBERON:0004923,5.32e-15,24;UBERON:0001007,3.27e-13,116;UBERON:0001555,3.27e-13,116;UBERON:0007026,3.27e-13,116;UBERON:0003350,5.10e-13,9;UBERON:0004808,5.10e-13,9;UBERON:0001277,5.10e-13,9;UBERON:0004119,7.18e-13,118;UBERON:0000925,7.18e-13,118;UBERON:0006595,7.18e-13,118;UBERON:0004921,2.76e-11,114;UBERON:0000485,1.91e-10,11;UBERON:0002108,2.89e-10,4;UBERON:0000331,3.82e-08,3;UBERON:0002116,3.82e-08,3;UBERON:0001204,3.82e-08,3;UBERON:0001168,3.82e-08,3 | |||
|phase1_expression=0,24.4282785347553,20.4749657725291,39.6228116811947,49.087781534742,5.70789524500425,4.43864017131499,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,5.43974237497583,5.73523202667925,14.9300310669905,12.4920978886132,7.54149314400612,12.1614988452079,14.8697776558359,4.43461021310609,0,0,0,0.577703239502549,1.32987716286794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383062014255563,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0.0755715601067855,0,0.860423876981386,0,0.539703191637817,3.24888208723835,2.68816132258401,2.10666630197628,0,0,0,0,0,0,0,0,0,0,3.88225191044804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.7946809812639,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.4684772428983,10.0491215332147,0,0,0.38660238396628,1.61346819698674,3.11329261382818,3.61428689613862,7.59246498471219,2.63518327558417,1.75934646160189,2.38747766449381,1.16978452271472,15.2799299471218,7.78096979548899,12.1476176685164,0,0.228497025219458,0,0.610953983535943,0.193952487167626,0.420814919341911,0.569128834118316,1.77132177575523,0.784993639206874,1.1105744752962,0.592905254174298,0,0,0.224862112384854,0,0,0,0.287696137450811,0,0,0,0.372140947668503,0,0.505157755894224,0.179397413521912,1.4473305640901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29214146584111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.57850175237612,0.370850604021019,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0.432021363287205,0,0.655087691238533,0.134864346384821,0.247960367176008,0.26175594198403,1.55537967950151,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.551530525350042,0.44449345560323,0.618105171716683,0.64183841918363,0,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0.347652977834566,0.192909220463705,0,0.441596760403192,0,0.177475806159338,0.238436189947321,0.436039249896986,0.376437521661322,0,0.365855945745545,0.526139422875686,0.271608227691724,0,0,0.394017929502254,0.409231043169689,0.154936841185966,0.192906610981141,0,0,0.644613162144895,0,0,0 | |phase1_expression=0,24.4282785347553,20.4749657725291,39.6228116811947,49.087781534742,5.70789524500425,4.43864017131499,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,5.43974237497583,5.73523202667925,14.9300310669905,12.4920978886132,7.54149314400612,12.1614988452079,14.8697776558359,4.43461021310609,0,0,0,0.577703239502549,1.32987716286794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383062014255563,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0.0755715601067855,0,0.860423876981386,0,0.539703191637817,3.24888208723835,2.68816132258401,2.10666630197628,0,0,0,0,0,0,0,0,0,0,3.88225191044804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.7946809812639,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.4684772428983,10.0491215332147,0,0,0.38660238396628,1.61346819698674,3.11329261382818,3.61428689613862,7.59246498471219,2.63518327558417,1.75934646160189,2.38747766449381,1.16978452271472,15.2799299471218,7.78096979548899,12.1476176685164,0,0.228497025219458,0,0.610953983535943,0.193952487167626,0.420814919341911,0.569128834118316,1.77132177575523,0.784993639206874,1.1105744752962,0.592905254174298,0,0,0.224862112384854,0,0,0,0.287696137450811,0,0,0,0.372140947668503,0,0.505157755894224,0.179397413521912,1.4473305640901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29214146584111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.57850175237612,0.370850604021019,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0.432021363287205,0,0.655087691238533,0.134864346384821,0.247960367176008,0.26175594198403,1.55537967950151,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.551530525350042,0.44449345560323,0.618105171716683,0.64183841918363,0,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0.347652977834566,0.192909220463705,0,0.441596760403192,0,0.177475806159338,0.238436189947321,0.436039249896986,0.376437521661322,0,0.365855945745545,0.526139422875686,0.271608227691724,0,0,0.394017929502254,0.409231043169689,0.154936841185966,0.192906610981141,0,0,0.644613162144895,0,0,0 | ||
|short_description=p@chr11:119960732..119960781,- | |short_description=p@chr11:119960732..119960781,- | ||
}} | }} |
Latest revision as of 14:45, 5 August 2015
Short description: | p@chr11:119960732..119960781, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:119960732..119960781, - |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.03e-15 | 6 |
gut absorptive cell | 2.03e-15 | 6 |
enterocyte | 2.03e-15 | 6 |
columnar/cuboidal epithelial cell | 4.24e-13 | 7 |
intestinal epithelial cell | 5.10e-13 | 9 |
epithelial cell of alimentary canal | 5.10e-13 | 9 |
epithelial cell | 7.42e-12 | 25 |
endodermal cell | 2.02e-08 | 20 |
M cell of gut | 2.59e-08 | 3 |
endo-epithelial cell | 2.33e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 7.80e-44 | 31 |
gastrointestinal system | 3.70e-29 | 47 |
mucosa | 7.34e-26 | 15 |
intestinal mucosa | 1.04e-21 | 13 |
wall of intestine | 1.04e-21 | 13 |
gastrointestinal system mucosa | 1.04e-21 | 13 |
organ component layer | 5.32e-15 | 24 |
digestive system | 3.27e-13 | 116 |
digestive tract | 3.27e-13 | 116 |
primitive gut | 3.27e-13 | 116 |
epithelium of mucosa | 5.10e-13 | 9 |
gastrointestinal system epithelium | 5.10e-13 | 9 |
intestinal epithelium | 5.10e-13 | 9 |
endoderm-derived structure | 7.18e-13 | 118 |
endoderm | 7.18e-13 | 118 |
presumptive endoderm | 7.18e-13 | 118 |
subdivision of digestive tract | 2.76e-11 | 114 |
simple columnar epithelium | 1.91e-10 | 11 |
small intestine | 2.89e-10 | 4 |
ileal mucosa | 3.82e-08 | 3 |
ileum | 3.82e-08 | 3 |
mucosa of small intestine | 3.82e-08 | 3 |
wall of small intestine | 3.82e-08 | 3 |