FFCP PHASE1:Mm9::chr14:75578208..75578243,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=659 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:75578208..75578243,- | |||
|description=CAGE_peak_at_chr14:75578208..75578243,- | |description=CAGE_peak_at_chr14:75578208..75578243,- | ||
|id=chr14:75578208..75578243,- | |id=chr14:75578208..75578243,- | ||
|ontology_enrichment_celltype=CL:0000988!5.46e-16!32;CL:0002032!5.46e-16!32;CL:0000037!5.46e-16!32;CL:0000566!5.46e-16!32;CL:0000837!5.46e-16!32;CL:0000838!4.46e-15!12;CL:0000084!6.98e-14!11;CL:0000827!6.98e-14!11;CL:0000542!1.11e-13!13;CL:0000051!1.11e-13!13;CL:0000738!1.33e-11!17;CL:0002087!1.33e-11!17;CL:0000791!2.82e-11!9;CL:0000789!2.82e-11!9;CL:0002420!2.82e-11!9;CL:0002419!2.82e-11!9;CL:0000790!2.82e-11!9;CL:0000893!2.15e-10!6;CL:0002489!2.15e-10!6;CL:0000898!2.15e-10!6;CL:0000809!2.15e-10!6;CL:0000810!2.15e-10!6;CL:0000895!2.15e-10!6;CL:0000808!2.15e-10!6;CL:0000894!2.15e-10!6;CL:0000806!2.15e-10!6;CL:0000807!2.15e-10!6;CL:0000805!2.15e-10!6;CL:0002425!2.15e-10!6;CL:0002436!2.15e-10!6;CL:0002427!2.15e-10!6;CL:0002428!2.15e-10!6;CL:0002429!2.15e-10!6;CL:0002433!2.15e-10!6;CL:0002431!2.15e-10!6;CL:0002432!2.15e-10!6;CL:0000624!4.99e-10!8;CL:0002031!1.26e-09!25;CL:0002320!2.43e-09!46;CL:0000134!2.43e-09!46;CL:0000219!3.75e-07!54 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.73e-23,32;CL:0002032,2.73e-23,32;CL:0000037,2.73e-23,32;CL:0000837,2.73e-23,32;CL:0000838,7.08e-23,12;CL:0000542,5.66e-21,13;CL:0000051,5.66e-21,13;CL:0000084,1.14e-20,11;CL:0000827,1.14e-20,11;CL:0000791,6.55e-16,9;CL:0000789,6.55e-16,9;CL:0002420,6.55e-16,9;CL:0002419,6.55e-16,9;CL:0000790,6.55e-16,9;CL:0000738,1.34e-15,17;CL:0002087,1.34e-15,17;CL:0002320,4.40e-15,46;CL:0000134,4.40e-15,46;CL:0000624,1.20e-13,8;CL:0000893,2.69e-13,6;CL:0002489,2.69e-13,6;CL:0000898,2.69e-13,6;CL:0000809,2.69e-13,6;CL:0000810,2.69e-13,6;CL:0000895,2.69e-13,6;CL:0000808,2.69e-13,6;CL:0000894,2.69e-13,6;CL:0000806,2.69e-13,6;CL:0000807,2.69e-13,6;CL:0000805,2.69e-13,6;CL:0002425,2.69e-13,6;CL:0002436,2.69e-13,6;CL:0002427,2.69e-13,6;CL:0002428,2.69e-13,6;CL:0002429,2.69e-13,6;CL:0002433,2.69e-13,6;CL:0002431,2.69e-13,6;CL:0002432,2.69e-13,6;CL:0000219,2.63e-12,54;CL:0002031,3.89e-12,25;CL:0000034,1.08e-11,97;CL:0000723,7.30e-09,91;CL:0000048,7.30e-09,91;CL:0000049,7.58e-07,19 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.49e-09,3;DOID:4045,1.49e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0002370!4.53e-22!23;UBERON:0000974!4.53e-22!23;UBERON:0004807!4.53e-22!23;UBERON:0005058!4.53e-22!23;UBERON:0003351!4.53e-22!23;UBERON:0009113!4.53e-22!23;UBERON:0003295!4.53e-22!23;UBERON:0009722!4.53e-22!23;UBERON:0005562!4.53e-22!23;UBERON:0007690!4.53e-22!23;UBERON:0006562!6.69e-21!24;UBERON:0003408!6.69e-21!24;UBERON:0001557!6.69e-21!24;UBERON:0001042!6.69e-21!24;UBERON:0008814!6.69e-21!24;UBERON:0009145!6.69e-21!24;UBERON:0002390!3.47e-18!45;UBERON:0003061!3.47e-18!45;UBERON:0004177!4.34e-18!29;UBERON:0002193!4.81e-18!48;UBERON:0000072!6.40e-18!27;UBERON:0002405!9.43e-13!70;UBERON:0000063!1.64e-12!35;UBERON:0000065!3.88e-12!41;UBERON:0001004!1.05e-11!42;UBERON:0005057!1.14e-10!51;UBERON:0002384!2.43e-09!46;UBERON:0003081!3.58e-09!88;UBERON:0002368!6.72e-09!60;UBERON:0000490!8.00e-09!66;UBERON:0003929!1.74e-08!55;UBERON:0002530!9.96e-08!65;UBERON:0005911!6.29e-07!69 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.40e-15,46;UBERON:0002370,4.93e-11,23;UBERON:0000974,4.93e-11,23;UBERON:0004807,4.93e-11,23;UBERON:0005058,4.93e-11,23;UBERON:0003351,4.93e-11,23;UBERON:0009113,4.93e-11,23;UBERON:0003295,4.93e-11,23;UBERON:0009722,4.93e-11,23;UBERON:0005562,4.93e-11,23;UBERON:0007690,4.93e-11,23;UBERON:0006562,1.70e-10,24;UBERON:0003408,1.70e-10,24;UBERON:0001557,1.70e-10,24;UBERON:0001042,1.70e-10,24;UBERON:0008814,1.70e-10,24;UBERON:0009145,1.70e-10,24;UBERON:0002390,6.03e-10,45;UBERON:0003061,6.03e-10,45;UBERON:0002193,3.81e-09,48;UBERON:0002405,3.81e-09,48;UBERON:0000072,3.98e-09,27;UBERON:0004177,2.26e-08,29;UBERON:0005057,2.26e-08,29 | |||
|phase1_expression=0,0,0,0,0,0,0,1.67860320474049,9.714421828465,7.95819389494778,4.62288514208863,4.30769658574817,2.22560948910567,0.611942816932982,0,0,0,0,0.685572168028694,1.69755860719212,0,2.28369187762036,1.30599894569468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.02237956884289,3.906676722619,1.0470474879476,2.35292595212406,2.04913645487534,3.88408282424923,0,0,0,0,0,0,0,0,0,1.00669563634642,0,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0,0,0,0.230615497256059,0,0.117588707135705,0,0,0,0.884610551949874,0,0,0,0,0,0,0,4.19352935770721,3.59941638596045,3.17675567682662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80885274925294,3.86021860672073,2.55747149456033,0.207125772535502,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0.224862112384854,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0,0,0,0,0,5.43930975980337,3.91864066506242,4.14599921413271,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21207784439725,0.405450430580328,0.410843828659309,0.25984164595559,0.895133478337407,1.19208812868759,0.480781798079875,0.295379054349154,1.61546319917036,0.304827226619999,0.403304740547362,0.292373642219257,1.44317762460494,1.05189211963412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,1.67860320474049,9.714421828465,7.95819389494778,4.62288514208863,4.30769658574817,2.22560948910567,0.611942816932982,0,0,0,0,0.685572168028694,1.69755860719212,0,2.28369187762036,1.30599894569468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.02237956884289,3.906676722619,1.0470474879476,2.35292595212406,2.04913645487534,3.88408282424923,0,0,0,0,0,0,0,0,0,1.00669563634642,0,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0,0,0,0.230615497256059,0,0.117588707135705,0,0,0,0.884610551949874,0,0,0,0,0,0,0,4.19352935770721,3.59941638596045,3.17675567682662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80885274925294,3.86021860672073,2.55747149456033,0.207125772535502,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0.224862112384854,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0,0,0,0,0,5.43930975980337,3.91864066506242,4.14599921413271,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21207784439725,0.405450430580328,0.410843828659309,0.25984164595559,0.895133478337407,1.19208812868759,0.480781798079875,0.295379054349154,1.61546319917036,0.304827226619999,0.403304740547362,0.292373642219257,1.44317762460494,1.05189211963412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr14:75578208..75578243,- | |short_description=p@chr14:75578208..75578243,- | ||
}} | }} |
Latest revision as of 19:46, 4 August 2015
Short description: | p@chr14:75578208..75578243, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:75578208..75578243, - |
Coexpression cluster: | MCL_coexpression_mm9:659 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.40e-15 | 46 |
thymus | 4.93e-11 | 23 |
neck | 4.93e-11 | 23 |
respiratory system epithelium | 4.93e-11 | 23 |
hemolymphoid system gland | 4.93e-11 | 23 |
pharyngeal epithelium | 4.93e-11 | 23 |
thymic region | 4.93e-11 | 23 |
pharyngeal gland | 4.93e-11 | 23 |
entire pharyngeal arch endoderm | 4.93e-11 | 23 |
thymus primordium | 4.93e-11 | 23 |
early pharyngeal endoderm | 4.93e-11 | 23 |
pharynx | 1.70e-10 | 24 |
gland of gut | 1.70e-10 | 24 |
upper respiratory tract | 1.70e-10 | 24 |
chordate pharynx | 1.70e-10 | 24 |
pharyngeal arch system | 1.70e-10 | 24 |
pharyngeal region of foregut | 1.70e-10 | 24 |
hematopoietic system | 6.03e-10 | 45 |
blood island | 6.03e-10 | 45 |
hemolymphoid system | 3.81e-09 | 48 |
immune system | 3.81e-09 | 48 |
segment of respiratory tract | 3.98e-09 | 27 |
hemopoietic organ | 2.26e-08 | 29 |
immune organ | 2.26e-08 | 29 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.49e-09 | 3 |
muscle cancer | 1.49e-09 | 3 |