FFCP PHASE1:Mm9::chr14:56223387..56223401,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16391 | |EntrezGene=16391 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-12bp_to_ENSMUST00000136109_5end | |association_with_transcript=-12bp_to_ENSMUST00000136109_5end | ||
|cluster_id=chr14:56223387..56223401,+ | |||
|description=CAGE_peak_3_at_Irf9_5end | |description=CAGE_peak_3_at_Irf9_5end | ||
|id=chr14:56223387..56223401,+ | |id=chr14:56223387..56223401,+ | ||
|ontology_enrichment_celltype=CL:0002031!3.58e-09!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,1.09e-13,25;CL:0000553,2.58e-11,6;CL:0000556,2.58e-11,6;CL:0002320,3.23e-10,46;CL:0000134,3.23e-10,46;CL:0000219,3.60e-10,54;CL:0000988,7.26e-10,32;CL:0002032,7.26e-10,32;CL:0000037,7.26e-10,32;CL:0000837,7.26e-10,32;CL:0000050,2.13e-09,9;CL:0000839,5.65e-08,13;CL:0002027,4.20e-07,3;CL:0002006,4.20e-07,3;CL:0002024,4.20e-07,3;CL:0000838,5.01e-07,12 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!1.44e-10!70;UBERON:0004119!1.78e-08!130;UBERON:0000925!1.78e-08!130;UBERON:0006595!1.78e-08!130;UBERON:0001007!3.02e-08!128;UBERON:0001555!3.02e-08!128;UBERON:0007026!3.02e-08!128;UBERON:0002193!5.35e-08!48;UBERON:0004921!7.25e-08!126;UBERON:0004185!7.25e-08!126;UBERON:0005057!1.74e-07!51;UBERON:0002390!3.96e-07!45;UBERON:0003061!3.96e-07!45;UBERON:0000490!5.40e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.46e-10,47;UBERON:0002384,3.23e-10,46;UBERON:0000160,1.40e-09,31;UBERON:0002106,1.01e-07,6;UBERON:0004457,1.01e-07,6;UBERON:0000042,1.01e-07,6;UBERON:0004854,1.01e-07,6;UBERON:0009034,1.01e-07,6;UBERON:0002095,1.01e-07,6;UBERON:0004782,1.01e-07,6;UBERON:0003281,1.01e-07,6;UBERON:0009664,1.01e-07,6;UBERON:0002296,1.01e-07,6;UBERON:0005602,1.01e-07,6;UBERON:0001179,1.01e-07,6;UBERON:0006293,1.01e-07,6;UBERON:0002193,5.40e-07,48;UBERON:0002405,5.40e-07,48 | |||
|phase1_expression=0,2.09385244583617,0.909998478779072,1.51232105653415,2.50447864973174,0.16787927191189,0,1.80772652818207,0.985521055061667,0.70219357896598,0.34243593645101,0,1.71200729931206,0.874204024189974,2.33176833270964,2.83465374345756,2.79824751251259,1.73504190947031,1.7824876368746,1.27316895539409,0.680346321208558,1.58865521921416,1.30599894569468,0.95995453676044,0.22940928106717,0,1.29228598847722,0.430942465371778,0.570070258369122,0.756090389279792,0.221730510655305,0.635030673459631,1.23012957516914,0,1.44425809875637,0.166234645358492,0,0.418531630736908,0,1.57057123192139,0,0,0.971020706062307,0.125896817975577,0.202753862439029,0.367093504323363,1.56478268869608,0,0.219686182734472,1.55543919259427,0.419959264876088,0,2.68452169692378,2.17608642603403,3.6970317905671,0.771778308107841,0.286533439938757,3.09403255366465,0,0,0,0.338844532069132,3.55717918444456,1.3498495759221,0,0,0.599200221036809,0.384218305321555,0.103689612308478,0,0,0,0,0,0,0,0,0.127687338085188,0,0.131886287730194,0,0,0,0,0,0,0.142371680799103,0,0.832988126665025,0.755715601067855,2.31891590961342,0,0,0,1.29955283489534,0,0.421333260395256,0.170430322578058,0,0,0.14084341977668,0,0,0,0,0,0,0.91347103775248,2.07150306917737,0.890652834388949,0.520455980298408,0,0,0.904335843315735,0.23517741427141,0.628332956648377,0.494389935468748,0.289198713839823,0.884610551949874,0,0.441683036920787,0,0,0,0,1.27728527604296,0,0,0.254140454146129,0,0,0,0,0,0,0,0.203678727700633,0.248813941220186,1.76905930903572,0.210441855886474,0,0,0,0,0.0680364991513279,0.12811372028485,0,0.258703370739016,0,0,0,0,0,0,0.205782136407943,0,0.702213187313235,0,0,0,0,0,0,0,0,0,0.536546802799238,0.116765342367169,0.16455984991348,0.164167464079095,0.162137619091711,0.438599962275997,0,0.402619256281115,0,0,3.96502539580558,2.11560453330835,0,0,0.128867461322093,0.201683524623343,0.22237804384487,1.14135375667535,1.42358718463353,1.31759163779209,1.25667604400135,1.79060824837036,0.58489226135736,1.79763881730844,1.29682829924817,0.995706366271836,0,0,0,0.203651327845314,0.387904974335251,0.210407459670956,0.189709611372772,0.147610147979602,0.31399745568275,0.123397163921801,0.592905254174298,0.166845105716094,0.393117990226406,0.224862112384854,0.405720242777006,0.964708639009667,0.25462585178142,2.30156909960649,0.648540907100142,0.823684239564244,1.43768206527355,0.744281895337007,0.624075346229121,0.505157755894224,0.358794827043824,0.482443521363367,0.554259570499814,0,0,0,0,0.167506257441816,0.238043640886014,0.975668239288994,0.315270288212382,0.664394068946325,0,0.655453258862952,0.518054945597687,0.723245292907558,0,1.63171705145613,0,0.275936746304732,0.321101179975584,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0.534196811001766,0.162886959353576,0.494910368917606,0,0,0,0.188605079755898,0,0.307435147943927,1.29214146584111,0.363533729477506,0,0.632073515871632,0,0,0.340439605753788,0,0.129358683782755,0.214337035031592,0.709360934569094,0.178368817602071,0,0,0.469343416127421,0.21183207086382,0,0,0,0,0,0,2.04036585640896,0,1.87957968877638,0,1.48155621895769,1.13021074202815,2.59719032669948,2.97411625168479,0.849892149969277,0.839708713941948,0.690999869022119,0,0,0,0,0,0.655087691238533,0,0.165306911450672,0.26175594198403,0.129614973291793,0.621339313086926,0,0,0.165458490457098,0.194451188344048,0,0.168956125490778,0.117357238645754,0,0,0,0,0.632022241256357,0.202725215290164,0.205421914329655,0.51968329191118,0.358053391334963,0.596044064343795,0.841368146639782,1.03382669022204,0.403865799792591,0.457240839929999,0.201652370273681,0.779663045918019,1.25075394132428,0.935015217452552,0,0.221985953374065,0,0.167884616364078,0,0.93841237725591,0.549454872801795,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0,0,0.505394423527595,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0,0.192909220463705,0,0,0,0.354951612318675,0.238436189947321,0,0.282328141245992,0.169229215783353,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0.249810577937946,0.233931608445408,0.429742108096597,0.191288332068843,0,0.463735671240843 | |phase1_expression=0,2.09385244583617,0.909998478779072,1.51232105653415,2.50447864973174,0.16787927191189,0,1.80772652818207,0.985521055061667,0.70219357896598,0.34243593645101,0,1.71200729931206,0.874204024189974,2.33176833270964,2.83465374345756,2.79824751251259,1.73504190947031,1.7824876368746,1.27316895539409,0.680346321208558,1.58865521921416,1.30599894569468,0.95995453676044,0.22940928106717,0,1.29228598847722,0.430942465371778,0.570070258369122,0.756090389279792,0.221730510655305,0.635030673459631,1.23012957516914,0,1.44425809875637,0.166234645358492,0,0.418531630736908,0,1.57057123192139,0,0,0.971020706062307,0.125896817975577,0.202753862439029,0.367093504323363,1.56478268869608,0,0.219686182734472,1.55543919259427,0.419959264876088,0,2.68452169692378,2.17608642603403,3.6970317905671,0.771778308107841,0.286533439938757,3.09403255366465,0,0,0,0.338844532069132,3.55717918444456,1.3498495759221,0,0,0.599200221036809,0.384218305321555,0.103689612308478,0,0,0,0,0,0,0,0,0.127687338085188,0,0.131886287730194,0,0,0,0,0,0,0.142371680799103,0,0.832988126665025,0.755715601067855,2.31891590961342,0,0,0,1.29955283489534,0,0.421333260395256,0.170430322578058,0,0,0.14084341977668,0,0,0,0,0,0,0.91347103775248,2.07150306917737,0.890652834388949,0.520455980298408,0,0,0.904335843315735,0.23517741427141,0.628332956648377,0.494389935468748,0.289198713839823,0.884610551949874,0,0.441683036920787,0,0,0,0,1.27728527604296,0,0,0.254140454146129,0,0,0,0,0,0,0,0.203678727700633,0.248813941220186,1.76905930903572,0.210441855886474,0,0,0,0,0.0680364991513279,0.12811372028485,0,0.258703370739016,0,0,0,0,0,0,0.205782136407943,0,0.702213187313235,0,0,0,0,0,0,0,0,0,0.536546802799238,0.116765342367169,0.16455984991348,0.164167464079095,0.162137619091711,0.438599962275997,0,0.402619256281115,0,0,3.96502539580558,2.11560453330835,0,0,0.128867461322093,0.201683524623343,0.22237804384487,1.14135375667535,1.42358718463353,1.31759163779209,1.25667604400135,1.79060824837036,0.58489226135736,1.79763881730844,1.29682829924817,0.995706366271836,0,0,0,0.203651327845314,0.387904974335251,0.210407459670956,0.189709611372772,0.147610147979602,0.31399745568275,0.123397163921801,0.592905254174298,0.166845105716094,0.393117990226406,0.224862112384854,0.405720242777006,0.964708639009667,0.25462585178142,2.30156909960649,0.648540907100142,0.823684239564244,1.43768206527355,0.744281895337007,0.624075346229121,0.505157755894224,0.358794827043824,0.482443521363367,0.554259570499814,0,0,0,0,0.167506257441816,0.238043640886014,0.975668239288994,0.315270288212382,0.664394068946325,0,0.655453258862952,0.518054945597687,0.723245292907558,0,1.63171705145613,0,0.275936746304732,0.321101179975584,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0.534196811001766,0.162886959353576,0.494910368917606,0,0,0,0.188605079755898,0,0.307435147943927,1.29214146584111,0.363533729477506,0,0.632073515871632,0,0,0.340439605753788,0,0.129358683782755,0.214337035031592,0.709360934569094,0.178368817602071,0,0,0.469343416127421,0.21183207086382,0,0,0,0,0,0,2.04036585640896,0,1.87957968877638,0,1.48155621895769,1.13021074202815,2.59719032669948,2.97411625168479,0.849892149969277,0.839708713941948,0.690999869022119,0,0,0,0,0,0.655087691238533,0,0.165306911450672,0.26175594198403,0.129614973291793,0.621339313086926,0,0,0.165458490457098,0.194451188344048,0,0.168956125490778,0.117357238645754,0,0,0,0,0.632022241256357,0.202725215290164,0.205421914329655,0.51968329191118,0.358053391334963,0.596044064343795,0.841368146639782,1.03382669022204,0.403865799792591,0.457240839929999,0.201652370273681,0.779663045918019,1.25075394132428,0.935015217452552,0,0.221985953374065,0,0.167884616364078,0,0.93841237725591,0.549454872801795,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0,0,0.505394423527595,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0,0.192909220463705,0,0,0,0.354951612318675,0.238436189947321,0,0.282328141245992,0.169229215783353,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0.249810577937946,0.233931608445408,0.429742108096597,0.191288332068843,0,0.463735671240843 | ||
|short_description=p3@Irf9 | |short_description=p3@Irf9 | ||
}} | }} |
Latest revision as of 03:41, 26 September 2015
Short description: | p3@Irf9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Irf9_5end |
Coexpression cluster: | NA |
Association with transcript: | -12bp_to_ENSMUST00000136109_5end |
EntrezGene: | Irf9 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 1.09e-13 | 25 |
megakaryocyte progenitor cell | 2.58e-11 | 6 |
megakaryocyte | 2.58e-11 | 6 |
connective tissue cell | 3.23e-10 | 46 |
mesenchymal cell | 3.23e-10 | 46 |
motile cell | 3.60e-10 | 54 |
hematopoietic cell | 7.26e-10 | 32 |
hematopoietic oligopotent progenitor cell | 7.26e-10 | 32 |
hematopoietic stem cell | 7.26e-10 | 32 |
hematopoietic multipotent progenitor cell | 7.26e-10 | 32 |
megakaryocyte-erythroid progenitor cell | 2.13e-09 | 9 |
myeloid lineage restricted progenitor cell | 5.65e-08 | 13 |
CD9-positive, CD41-positive megakaryocyte cell | 4.20e-07 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 4.20e-07 | 3 |
Kit-positive megakaryocyte progenitor cell | 4.20e-07 | 3 |
lymphoid lineage restricted progenitor cell | 5.01e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 1.46e-10 | 47 |
connective tissue | 3.23e-10 | 46 |
intestine | 1.40e-09 | 31 |
spleen | 1.01e-07 | 6 |
cavity lining | 1.01e-07 | 6 |
serous membrane | 1.01e-07 | 6 |
gastrointestinal system mesentery | 1.01e-07 | 6 |
stomach region | 1.01e-07 | 6 |
mesentery | 1.01e-07 | 6 |
gastrointestinal system serosa | 1.01e-07 | 6 |
mesentery of stomach | 1.01e-07 | 6 |
gut mesentery | 1.01e-07 | 6 |
dorsal mesentery | 1.01e-07 | 6 |
dorsal mesogastrium | 1.01e-07 | 6 |
peritoneal cavity | 1.01e-07 | 6 |
spleen primordium | 1.01e-07 | 6 |
hemolymphoid system | 5.40e-07 | 48 |
immune system | 5.40e-07 | 48 |