Personal tools

FFCP PHASE1:Mm9::chr11:100800901..100800921,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=20848
|EntrezGene=20848
|HGNC=
|HGNC=
|MCL_coexpression_id=4
|TSSclassifier=NA
|UniProt=P42227
|UniProt=P42227
|association_with_transcript=-47bp_to_ENSMUST00000127638_5end
|association_with_transcript=-47bp_to_ENSMUST00000127638_5end
|cluster_id=chr11:100800901..100800921,-
|description=CAGE_peak_4_at_Stat3_5end
|description=CAGE_peak_4_at_Stat3_5end
|id=chr11:100800901..100800921,-
|id=chr11:100800901..100800921,-
|ontology_enrichment_celltype=CL:0000791!2.42e-07!9;CL:0000789!2.42e-07!9;CL:0002420!2.42e-07!9;CL:0002419!2.42e-07!9;CL:0000790!2.42e-07!9;CL:0000624!9.90e-07!8
|ontology_enrichment_celltype=CL:0000791!2.42e-07!9;CL:0000789!2.42e-07!9;CL:0002420!2.42e-07!9;CL:0002419!2.42e-07!9;CL:0000790!2.42e-07!9;CL:0000624!9.90e-07!8
|ontology_enrichment_celltype_v019_2=CL:0000791,2.34e-14,9;CL:0000789,2.34e-14,9;CL:0002420,2.34e-14,9;CL:0002419,2.34e-14,9;CL:0000790,2.34e-14,9;CL:0000624,5.18e-13,8;CL:0000084,2.49e-11,11;CL:0000827,2.49e-11,11;CL:0000838,3.37e-10,12;CL:0000893,4.90e-10,6;CL:0002489,4.90e-10,6;CL:0000898,4.90e-10,6;CL:0000809,4.90e-10,6;CL:0000810,4.90e-10,6;CL:0000895,4.90e-10,6;CL:0000808,4.90e-10,6;CL:0000894,4.90e-10,6;CL:0000806,4.90e-10,6;CL:0000807,4.90e-10,6;CL:0000805,4.90e-10,6;CL:0002425,4.90e-10,6;CL:0002436,4.90e-10,6;CL:0002427,4.90e-10,6;CL:0002428,4.90e-10,6;CL:0002429,4.90e-10,6;CL:0002433,4.90e-10,6;CL:0002431,4.90e-10,6;CL:0002432,4.90e-10,6;CL:0000542,3.04e-09,13;CL:0000051,3.04e-09,13
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000153!1.41e-14!94;UBERON:0007811!3.96e-12!86;UBERON:0002370!4.23e-10!23;UBERON:0000974!4.23e-10!23;UBERON:0004807!4.23e-10!23;UBERON:0005058!4.23e-10!23;UBERON:0003351!4.23e-10!23;UBERON:0009113!4.23e-10!23;UBERON:0003295!4.23e-10!23;UBERON:0009722!4.23e-10!23;UBERON:0005562!4.23e-10!23;UBERON:0007690!4.23e-10!23;UBERON:0006562!6.65e-10!24;UBERON:0001557!6.65e-10!24;UBERON:0001042!6.65e-10!24;UBERON:0008814!6.65e-10!24;UBERON:0009145!6.65e-10!24;UBERON:0003408!3.39e-09!24;UBERON:0004177!8.86e-09!29;UBERON:0000072!1.53e-07!27
|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.79e-21,23;UBERON:0000974,5.79e-21,23;UBERON:0004807,5.79e-21,23;UBERON:0005058,5.79e-21,23;UBERON:0003351,5.79e-21,23;UBERON:0009113,5.79e-21,23;UBERON:0003295,5.79e-21,23;UBERON:0009722,5.79e-21,23;UBERON:0005562,5.79e-21,23;UBERON:0007690,5.79e-21,23;UBERON:0006562,7.51e-20,24;UBERON:0003408,7.51e-20,24;UBERON:0001557,7.51e-20,24;UBERON:0001042,7.51e-20,24;UBERON:0008814,7.51e-20,24;UBERON:0009145,7.51e-20,24;UBERON:0000072,5.15e-17,27;UBERON:0000153,2.50e-16,43;UBERON:0004177,1.87e-15,29;UBERON:0005057,1.87e-15,29;UBERON:0007811,1.16e-12,36;UBERON:0000077,7.20e-12,35;UBERON:0000065,2.30e-09,41;UBERON:0001004,5.09e-09,42;UBERON:0002193,3.26e-08,48;UBERON:0002405,3.26e-08,48;UBERON:0002390,4.40e-08,45;UBERON:0003061,4.40e-08,45
|phase1_expression=0.640595388419176,0,0,0,1.00179145989269,0,0,5.16493293766305,3.23814060948833,4.21316147379588,4.79410311031414,6.1424562426409,7.01922992717943,7.60557501045277,0,0,0,0.157731082679119,0.411343300817216,0.84877930359606,1.10556277196391,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.101376931219515,0,0,0,0,0.388859798148567,0.139986421625363,0,0.335565212115473,12.3311564141929,3.36093799142464,0,0.573066879877513,0,1.01158230429799,1.05798195854407,0.633831403506179,0,0,0,0,0.7104801149461,0.599200221036809,0.768436610643109,0.207379224616955,0.675029691658453,0.420649922702764,0.856952953211411,1.10434270475807,1.5923803897944,1.0543001812006,1.83843757322004,0,0.255374676170375,0.614426133024974,0.527545150920775,0.182975287204819,0.52091337055676,0.837548997004143,1.12552522006336,0.763991238884051,0.589257170947335,1.56608848879013,0.931997229126503,0,0.0755715601067855,0,0,0,0,0,0,0,0.170430322578058,0,0,1.12674735821344,0,0,0,0,0,0,0.22836775943812,1.55362730188303,0.148442139064825,0,0.304465478312141,0.230615497256059,0.150722640552623,0.117588707135705,0,0,0,0,0.161766849947409,0.220841518460394,0,0,0,0,0,0.11981512450592,0,0,1.19832511523858,6.40500843946077,3.01570445070875,1.56441888173049,1.27857728665165,1.45451631191692,2.10913641988085,0.611036183101898,0,0.758168275301024,0.210441855886474,0,0,0.180062129805349,0.452114453507145,0.476255494059295,0.2562274405697,0.374806898238915,0.517406741478031,0,0.378212160335639,1.23165786914764,1.09597866213787,1.66828349535359,3.1342694986995,3.08673204611915,0.199034266818493,0,0,0,0.414251545071004,0,0.180062061461015,0,0,0.154267112887378,0,0,0.350296027101508,0.329119699826961,0.164167464079095,0.162137619091711,0.584799949701329,0,0,2.52347938276953,0.514523061896422,0,0,0,0,0.128867461322093,0,0.22237804384487,0,0,0,0,0,0.19496408711912,0,0,0,0.189667900953082,0,0,0.407302655690628,0,0.210407459670956,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.184753190166605,0,0.488894929326078,0.169745085775188,0,0.167506257441816,0,0.390267295715598,0,0.221464689648775,0.159454768657487,0,0.172684981865896,0,0,0,0,0,0.160550589987792,0.820481806145422,0.163934945376675,0,0,0.390438744296638,0,0,0.222798674082394,0,0,0.292255857911312,0,5.78378369559253,0.141940085208269,0.712262414669021,0.162886959353576,0,0,0.242780636154981,0,0,0.295301892880773,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0.428674070063185,1.06404140185364,0.356737635204141,0.164549020602121,0.913394847343798,0.704015124191131,0.21183207086382,0.220528398054962,0.98931751764888,2.9063596805263,2.23157822234177,1.19372344003136,0.492422699235184,0.291480836629851,1.29797711407357,0.683483523191411,0,0.370389054739423,0,0.410082683163076,0.457556346413045,0,0.139951452323658,0,0,0,0,0.216010681643603,0.418176592028937,0.218362563746178,0.404593039154462,0.578574190077352,0.26175594198403,0.129614973291793,0,1.12738587736838,0.149516546043979,0.330916980914195,0.388902376688095,0,0.168956125490778,0.58678619322877,0.13020438484395,0.314578033277133,1.20792060413003,0.288030006257865,20.8567339614598,0.202725215290164,1.23253148597793,0.909445760844565,3.58053391334963,7.54989148168807,10.5771995577573,10.6336459565696,9.28891339522958,11.659641418215,13.0065778826524,13.9364769457846,15.2014709791721,15.4277510879671,0.226730383615211,0.221985953374065,0,0,0,0,0,0.214368379079066,0,0,0,0.572895513439397,0.343706364687375,0.685082519770642,0,0.675022500231806,0.900642406448441,2.71885445390523,0,0.103787347584177,0.399024873401031,0,1.94485373654635,0.838452650511929,0.551530525350042,0.44449345560323,0.824140228955577,0.64183841918363,0.758091635291392,0.25347929989024,1.50901073108861,0.842773567228942,0.512201219238954,0.689225627467359,0.476293691283074,0.927074607558844,0.578727661391115,0.824171801606613,1.03039244094078,0.342869252385415,0.354951612318675,0.476872379894642,1.30811774969096,0.282328141245992,0.507687647350059,0.365855945745545,0.526139422875686,0.679020569229309,0.561142271657738,0.593175090620871,0.591026894253381,1.22769312950907,0.464810523557898,1.54325288784913,0.749431733813838,0.935726433781634,1.50409737833809,2.10417165275728,0.441182838239031,0
|phase1_expression=0.640595388419176,0,0,0,1.00179145989269,0,0,5.16493293766305,3.23814060948833,4.21316147379588,4.79410311031414,6.1424562426409,7.01922992717943,7.60557501045277,0,0,0,0.157731082679119,0.411343300817216,0.84877930359606,1.10556277196391,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.101376931219515,0,0,0,0,0.388859798148567,0.139986421625363,0,0.335565212115473,12.3311564141929,3.36093799142464,0,0.573066879877513,0,1.01158230429799,1.05798195854407,0.633831403506179,0,0,0,0,0.7104801149461,0.599200221036809,0.768436610643109,0.207379224616955,0.675029691658453,0.420649922702764,0.856952953211411,1.10434270475807,1.5923803897944,1.0543001812006,1.83843757322004,0,0.255374676170375,0.614426133024974,0.527545150920775,0.182975287204819,0.52091337055676,0.837548997004143,1.12552522006336,0.763991238884051,0.589257170947335,1.56608848879013,0.931997229126503,0,0.0755715601067855,0,0,0,0,0,0,0,0.170430322578058,0,0,1.12674735821344,0,0,0,0,0,0,0.22836775943812,1.55362730188303,0.148442139064825,0,0.304465478312141,0.230615497256059,0.150722640552623,0.117588707135705,0,0,0,0,0.161766849947409,0.220841518460394,0,0,0,0,0,0.11981512450592,0,0,1.19832511523858,6.40500843946077,3.01570445070875,1.56441888173049,1.27857728665165,1.45451631191692,2.10913641988085,0.611036183101898,0,0.758168275301024,0.210441855886474,0,0,0.180062129805349,0.452114453507145,0.476255494059295,0.2562274405697,0.374806898238915,0.517406741478031,0,0.378212160335639,1.23165786914764,1.09597866213787,1.66828349535359,3.1342694986995,3.08673204611915,0.199034266818493,0,0,0,0.414251545071004,0,0.180062061461015,0,0,0.154267112887378,0,0,0.350296027101508,0.329119699826961,0.164167464079095,0.162137619091711,0.584799949701329,0,0,2.52347938276953,0.514523061896422,0,0,0,0,0.128867461322093,0,0.22237804384487,0,0,0,0,0,0.19496408711912,0,0,0,0.189667900953082,0,0,0.407302655690628,0,0.210407459670956,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.184753190166605,0,0.488894929326078,0.169745085775188,0,0.167506257441816,0,0.390267295715598,0,0.221464689648775,0.159454768657487,0,0.172684981865896,0,0,0,0,0,0.160550589987792,0.820481806145422,0.163934945376675,0,0,0.390438744296638,0,0,0.222798674082394,0,0,0.292255857911312,0,5.78378369559253,0.141940085208269,0.712262414669021,0.162886959353576,0,0,0.242780636154981,0,0,0.295301892880773,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0.428674070063185,1.06404140185364,0.356737635204141,0.164549020602121,0.913394847343798,0.704015124191131,0.21183207086382,0.220528398054962,0.98931751764888,2.9063596805263,2.23157822234177,1.19372344003136,0.492422699235184,0.291480836629851,1.29797711407357,0.683483523191411,0,0.370389054739423,0,0.410082683163076,0.457556346413045,0,0.139951452323658,0,0,0,0,0.216010681643603,0.418176592028937,0.218362563746178,0.404593039154462,0.578574190077352,0.26175594198403,0.129614973291793,0,1.12738587736838,0.149516546043979,0.330916980914195,0.388902376688095,0,0.168956125490778,0.58678619322877,0.13020438484395,0.314578033277133,1.20792060413003,0.288030006257865,20.8567339614598,0.202725215290164,1.23253148597793,0.909445760844565,3.58053391334963,7.54989148168807,10.5771995577573,10.6336459565696,9.28891339522958,11.659641418215,13.0065778826524,13.9364769457846,15.2014709791721,15.4277510879671,0.226730383615211,0.221985953374065,0,0,0,0,0,0.214368379079066,0,0,0,0.572895513439397,0.343706364687375,0.685082519770642,0,0.675022500231806,0.900642406448441,2.71885445390523,0,0.103787347584177,0.399024873401031,0,1.94485373654635,0.838452650511929,0.551530525350042,0.44449345560323,0.824140228955577,0.64183841918363,0.758091635291392,0.25347929989024,1.50901073108861,0.842773567228942,0.512201219238954,0.689225627467359,0.476293691283074,0.927074607558844,0.578727661391115,0.824171801606613,1.03039244094078,0.342869252385415,0.354951612318675,0.476872379894642,1.30811774969096,0.282328141245992,0.507687647350059,0.365855945745545,0.526139422875686,0.679020569229309,0.561142271657738,0.593175090620871,0.591026894253381,1.22769312950907,0.464810523557898,1.54325288784913,0.749431733813838,0.935726433781634,1.50409737833809,2.10417165275728,0.441182838239031,0
|short_description=p4@Stat3
|short_description=p4@Stat3
}}
}}

Latest revision as of 16:53, 26 September 2015

Short description:p4@Stat3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Stat3_5end
Coexpression cluster:MCL_coexpression_mm9:4
Association with transcript: -47bp_to_ENSMUST00000127638_5end
EntrezGene:Stat3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Stat3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E95.16
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.24
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F24.21
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E64.79
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F16.14
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E47.02
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E87.61
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.11
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I912.33
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.36
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.59
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.05
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.76
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H91.55
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.20
corpus striatum, adult.CNhs10487.19-21D86.41
corpus striatum, neonate N00.CNhs11226.630-43F13.02
cortex, adult.CNhs10473.12-14D51.56
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F21.45
diencephalon, neonate N30.CNhs11201.1388-42B22.11
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.48
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E21.23
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C43.13
forelimb, embryo E18.CNhs11008.1520-43B53.09
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E82.52
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.82
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I95.78
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.99
skin, neonate N00.CNhs11124.650-25G42.91
skin, neonate N03.CNhs11215.662-22H32.23
skin, neonate N06.CNhs11097.693-20I51.19
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C91.30
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B520.86
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I21.23
thymus, embryo E16.CNhs11002.456-26C50.91
thymus, embryo E17.CNhs10581.478-18C13.58
thymus, embryo E18.CNhs10595.1273-19G47.55
thymus, neonate N02.CNhs11181.1541-43F810.58
thymus, neonate N03.CNhs11137.2104-43C710.63
thymus, neonate N06.CNhs11197.681-26C49.29
thymus, neonate N07.CNhs11211.713-19D311.66
thymus, neonate N10.CNhs11194.748-24E413.01
thymus, neonate N20.CNhs11186.820-7A213.94
thymus, neonate N25.CNhs11125.1362-25G715.20
thymus, neonate N30.CNhs11132.1393-42G215.43
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C62.10
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
mature alpha-beta T cell2.34e-149
alpha-beta T cell2.34e-149
immature T cell2.34e-149
mature T cell2.34e-149
immature alpha-beta T cell2.34e-149
CD4-positive, alpha-beta T cell5.18e-138
T cell2.49e-1111
pro-T cell2.49e-1111
lymphoid lineage restricted progenitor cell3.37e-1012
thymocyte4.90e-106
double negative thymocyte4.90e-106
naive T cell4.90e-106
double-positive, alpha-beta thymocyte4.90e-106
CD4-positive, alpha-beta thymocyte4.90e-106
naive thymus-derived CD4-positive, alpha-beta T cell4.90e-106
DN4 thymocyte4.90e-106
DN1 thymic pro-T cell4.90e-106
DN2 thymocyte4.90e-106
DN3 thymocyte4.90e-106
immature single positive thymocyte4.90e-106
early T lineage precursor4.90e-106
mature CD4 single-positive thymocyte4.90e-106
resting double-positive thymocyte4.90e-106
double-positive blast4.90e-106
CD69-positive double-positive thymocyte4.90e-106
CD69-positive, CD4-positive single-positive thymocyte4.90e-106
CD4-positive, CD8-intermediate double-positive thymocyte4.90e-106
CD24-positive, CD4 single-positive thymocyte4.90e-106
lymphocyte3.04e-0913
common lymphoid progenitor3.04e-0913

Uber anatomy
Ontology termp-valuen
thymus5.79e-2123
neck5.79e-2123
respiratory system epithelium5.79e-2123
hemolymphoid system gland5.79e-2123
pharyngeal epithelium5.79e-2123
thymic region5.79e-2123
pharyngeal gland5.79e-2123
entire pharyngeal arch endoderm5.79e-2123
thymus primordium5.79e-2123
early pharyngeal endoderm5.79e-2123
pharynx7.51e-2024
gland of gut7.51e-2024
upper respiratory tract7.51e-2024
chordate pharynx7.51e-2024
pharyngeal arch system7.51e-2024
pharyngeal region of foregut7.51e-2024
segment of respiratory tract5.15e-1727
anterior region of body2.50e-1643
hemopoietic organ1.87e-1529
immune organ1.87e-1529
craniocervical region1.16e-1236
mixed endoderm/mesoderm-derived structure7.20e-1235
respiratory tract2.30e-0941
respiratory system5.09e-0942
hemolymphoid system3.26e-0848
immune system3.26e-0848
hematopoietic system4.40e-0845
blood island4.40e-0845
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr11:100800901..100800921,-&oldid=4263924"