FFCP PHASE1:Hg19::chr10:105881906..105881935,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=119392 | |EntrezGene=119392 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29574 | |HGNC=29574 | ||
|TSSclassifier=strong | |||
|UniProt=Q86XK3 | |UniProt=Q86XK3 | ||
|association_with_transcript=0bp_to_ENST00000369727,NM_001002759,uc001kxu.2_5end | |association_with_transcript=0bp_to_ENST00000369727,NM_001002759,uc001kxu.2_5end | ||
|cluster_id=chr10:105881906..105881935,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_1_at_SFR1_5end | |description=CAGE_peak_1_at_SFR1_5end | ||
|id=chr10:105881906..105881935,+ | |id=chr10:105881906..105881935,+ | ||
|ontology_enrichment_celltype=CL:0002031!1.41e-20!124;CL:0000037!4.18e-20!172;CL:0000566!4.18e-20!172;CL:0002032!7.34e-20!165;CL:0000837!7.34e-20!165;CL:0000738!1.11e-18!140;CL:0002087!4.07e-18!119;CL:0000988!4.30e-17!182;CL:0000860!2.36e-12!45;CL:0002057!5.96e-12!42;CL:0000542!1.90e-10!53;CL:0000051!1.90e-10!53;CL:0000838!1.99e-10!52;CL:0000763!4.31e-10!112;CL:0000049!4.31e-10!112;CL:0000839!4.43e-10!70;CL:0002009!3.32e-09!65;CL:0000766!3.39e-09!76;CL:0000557!4.14e-09!71;CL:0002194!1.19e-08!63;CL:0000576!1.19e-08!63;CL:0000040!1.19e-08!63;CL:0000559!1.19e-08!63;CL:0000063!7.23e-07!578 | |ontology_enrichment_celltype=CL:0002031!1.41e-20!124;CL:0000037!4.18e-20!172;CL:0000566!4.18e-20!172;CL:0002032!7.34e-20!165;CL:0000837!7.34e-20!165;CL:0000738!1.11e-18!140;CL:0002087!4.07e-18!119;CL:0000988!4.30e-17!182;CL:0000860!2.36e-12!45;CL:0002057!5.96e-12!42;CL:0000542!1.90e-10!53;CL:0000051!1.90e-10!53;CL:0000838!1.99e-10!52;CL:0000763!4.31e-10!112;CL:0000049!4.31e-10!112;CL:0000839!4.43e-10!70;CL:0002009!3.32e-09!65;CL:0000766!3.39e-09!76;CL:0000557!4.14e-09!71;CL:0002194!1.19e-08!63;CL:0000576!1.19e-08!63;CL:0000040!1.19e-08!63;CL:0000559!1.19e-08!63;CL:0000063!7.23e-07!578 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.93e-11;33!CL:0002057;3.93e-11;33!CL:0000473;9.72e-08;39!CL:0000234;9.72e-08;39!CL:0000576;2.18e-07;48!CL:0002087;4.50e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,3.68e-20,120;CL:0000037,5.63e-20,168;CL:0002032,7.86e-20,161;CL:0000837,7.86e-20,161;CL:0000738,3.11e-18,136;CL:0002087,1.01e-17,115;CL:0000988,6.07e-17,177;CL:0000860,7.15e-12,42;CL:0002057,7.15e-12,42;CL:0000542,1.16e-10,53;CL:0000051,1.16e-10,53;CL:0000838,1.21e-10,52;CL:0000473,5.84e-10,48;CL:0000234,5.84e-10,48;CL:0000763,6.68e-10,108;CL:0000049,6.68e-10,108;CL:0000839,1.58e-09,66;CL:0000766,7.71e-09,72;CL:0002009,8.90e-09,61;CL:0000557,1.18e-08,67;CL:0002194,3.21e-08,59;CL:0000576,3.21e-08,59;CL:0000040,3.21e-08,59;CL:0000559,3.21e-08,59 | |||
|ontology_enrichment_development_v019=CL:0002057;4.72e-09;42 | |||
|ontology_enrichment_disease=DOID:14566!8.27e-12!239;DOID:162!8.38e-11!235;DOID:305!4.67e-10!106;DOID:0050687!6.58e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,6.62e-12,239;DOID:162,6.89e-11,235;DOID:305,5.68e-10,106;DOID:0050687,6.66e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0002371!2.23e-08!80;UBERON:0001474!1.85e-07!86;UBERON:0002390!2.96e-07!102;UBERON:0003061!2.96e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.85e-08,76;UBERON:0001474,5.25e-07,82;UBERON:0002390,8.44e-07,98;UBERON:0003061,8.44e-07,98 | |||
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| ||
|short_description=p1@SFR1 | |short_description=p1@SFR1 | ||
}} | }} |
Latest revision as of 05:24, 16 September 2015
Short description: | p1@SFR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SFR1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_ENST00000369727, NM_001002759, uc001kxu.2_5end |
EntrezGene: | SFR1 |
HGNC: | 29574 |
UniProt: | Q86XK3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 3.68e-20 | 120 |
hematopoietic stem cell | 5.63e-20 | 168 |
hematopoietic oligopotent progenitor cell | 7.86e-20 | 161 |
hematopoietic multipotent progenitor cell | 7.86e-20 | 161 |
leukocyte | 3.11e-18 | 136 |
nongranular leukocyte | 1.01e-17 | 115 |
hematopoietic cell | 6.07e-17 | 177 |
classical monocyte | 7.15e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.15e-12 | 42 |
lymphocyte | 1.16e-10 | 53 |
common lymphoid progenitor | 1.16e-10 | 53 |
lymphoid lineage restricted progenitor cell | 1.21e-10 | 52 |
defensive cell | 5.84e-10 | 48 |
phagocyte | 5.84e-10 | 48 |
myeloid cell | 6.68e-10 | 108 |
common myeloid progenitor | 6.68e-10 | 108 |
myeloid lineage restricted progenitor cell | 1.58e-09 | 66 |
myeloid leukocyte | 7.71e-09 | 72 |
macrophage dendritic cell progenitor | 8.90e-09 | 61 |
granulocyte monocyte progenitor cell | 1.18e-08 | 67 |
monopoietic cell | 3.21e-08 | 59 |
monocyte | 3.21e-08 | 59 |
monoblast | 3.21e-08 | 59 |
promonocyte | 3.21e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.85e-08 | 76 |
bone element | 5.25e-07 | 82 |
hematopoietic system | 8.44e-07 | 98 |
blood island | 8.44e-07 | 98 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 6.62e-12 | 239 |
cancer | 6.89e-11 | 235 |
carcinoma | 5.68e-10 | 106 |
cell type cancer | 6.66e-07 | 143 |