FFCP PHASE1:Hg19::chr10:10504367..10504380,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:10504367..10504380,+ | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_at_chr10:10504367..10504380,+ | |description=CAGE_peak_at_chr10:10504367..10504380,+ | ||
|id=chr10:10504367..10504380,+ | |id=chr10:10504367..10504380,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.27e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!3.92e-104!32;UBERON:0001893!8.78e-98!34;UBERON:0002020!1.51e-97!34;UBERON:0003528!1.51e-97!34;UBERON:0002791!6.67e-94!33;UBERON:0002780!7.01e-92!41;UBERON:0001890!7.01e-92!41;UBERON:0006240!7.01e-92!41;UBERON:0003080!1.42e-89!42;UBERON:0002619!2.53e-87!22;UBERON:0001950!3.29e-79!20;UBERON:0001049!7.28e-78!57;UBERON:0005068!7.28e-78!57;UBERON:0006241!7.28e-78!57;UBERON:0007135!7.28e-78!57;UBERON:0000956!1.31e-76!25;UBERON:0000203!1.31e-76!25;UBERON:0000955!9.32e-71!69;UBERON:0006238!9.32e-71!69;UBERON:0002616!1.55e-70!59;UBERON:0005743!1.45e-69!86;UBERON:0001017!1.51e-69!82;UBERON:0003056!4.93e-68!61;UBERON:0000073!2.55e-62!94;UBERON:0001016!2.55e-62!94;UBERON:0002346!2.11e-59!90;UBERON:0003075!4.11e-59!86;UBERON:0007284!4.11e-59!86;UBERON:0000033!7.45e-44!123;UBERON:0000153!1.86e-41!129;UBERON:0007811!1.86e-41!129;UBERON:0007023!6.65e-40!115;UBERON:0000924!3.69e-34!173;UBERON:0006601!3.69e-34!173;UBERON:0004121!2.93e-33!169;UBERON:0002420!3.63e-29!9;UBERON:0007245!3.63e-29!9;UBERON:0010009!3.63e-29!9;UBERON:0010011!3.63e-29!9;UBERON:0000454!3.63e-29!9;UBERON:0001871!1.80e-26!7;UBERON:0000200!9.49e-26!6;UBERON:0002021!3.70e-22!5;UBERON:0002308!7.40e-22!9;UBERON:0000125!7.40e-22!9;UBERON:0001872!8.04e-22!5;UBERON:0000349!1.09e-21!5;UBERON:0009663!3.35e-21!7;UBERON:0000025!1.17e-17!194;UBERON:0000369!1.98e-17!4;UBERON:0002435!1.98e-17!4;UBERON:0000204!1.98e-17!4;UBERON:0010082!1.98e-17!4;UBERON:0002771!5.09e-14!3;UBERON:0000064!1.21e-13!219;UBERON:0005383!1.56e-13!3;UBERON:0005382!1.56e-13!3;UBERON:0004111!1.00e-12!241;UBERON:0000477!2.88e-11!286;UBERON:0000483!1.18e-10!309;UBERON:0000119!1.78e-10!312;UBERON:0000475!4.47e-10!365;UBERON:0001876!6.93e-10!2;UBERON:0001870!9.81e-10!2;UBERON:0001873!1.17e-09!2;UBERON:0010122!1.17e-09!2;UBERON:0001954!1.22e-09!2;UBERON:0003022!1.22e-09!2;UBERON:0002421!1.22e-09!2;UBERON:0002600!1.22e-09!2;UBERON:0001875!3.83e-09!2;UBERON:0006514!3.83e-09!2;UBERON:0000481!3.42e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.34e-102;22!UBERON:0001950;1.00e-98;20!UBERON:0000956;2.69e-90;25!UBERON:0000203;2.69e-90;25!UBERON:0001869;3.51e-74;32!UBERON:0002791;2.27e-72;32!UBERON:0001893;5.55e-67;34!UBERON:0003528;7.01e-66;34!UBERON:0002020;7.01e-66;34!UBERON:0001871;1.09e-47;6!UBERON:0002780;1.39e-45;41!UBERON:0001890;1.39e-45;41!UBERON:0002021;9.06e-31;5!UBERON:0000073;2.38e-26;53!UBERON:0002616;2.38e-26;53!UBERON:0000200;1.60e-25;6!UBERON:0000955;3.54e-23;68!UBERON:0001017;5.61e-22;75!UBERON:0002702;3.85e-20;2!UBERON:0002771;8.72e-20;2!UBERON:0001876;1.54e-19;2!UBERON:0001872;6.08e-18;5!UBERON:0000349;2.60e-17;5!UBERON:0001016;2.16e-14;83!UBERON:0001870;9.29e-14;3!UBERON:0002420;5.89e-10;9!UBERON:0007245;5.89e-10;9!UBERON:0010009;5.89e-10;9!UBERON:0010011;5.89e-10;9!UBERON:0000454;5.89e-10;9!UBERON:0011216;8.26e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.92e-102,22;UBERON:0001950,8.19e-99,20;UBERON:0000956,2.26e-90,25;UBERON:0000203,2.26e-90,25;UBERON:0002791,4.71e-80,32;UBERON:0001869,4.71e-80,32;UBERON:0003528,2.39e-75,34;UBERON:0002020,2.39e-75,34;UBERON:0001893,2.39e-75,34;UBERON:0002780,2.12e-62,41;UBERON:0001890,2.12e-62,41;UBERON:0003080,2.12e-62,41;UBERON:0006240,2.12e-62,41;UBERON:0000073,5.30e-48,53;UBERON:0002616,5.30e-48,53;UBERON:0001871,8.56e-48,6;UBERON:0000955,3.70e-46,68;UBERON:0006238,3.70e-46,68;UBERON:0001049,2.39e-45,56;UBERON:0005068,2.39e-45,56;UBERON:0006241,2.39e-45,56;UBERON:0007135,2.39e-45,56;UBERON:0001017,7.91e-43,81;UBERON:0003056,1.71e-41,61;UBERON:0001016,2.22e-38,89;UBERON:0002021,1.06e-30,5;UBERON:0003075,2.29e-30,82;UBERON:0007284,2.29e-30,82;UBERON:0002346,7.45e-29,86;UBERON:0000200,1.87e-25,6;UBERON:0010371,1.80e-23,104;UBERON:0002702,4.45e-20,2;UBERON:0002771,9.60e-20,2;UBERON:0001876,9.60e-20,2;UBERON:0004121,5.39e-19,171;UBERON:0000924,5.39e-19,171;UBERON:0006601,5.39e-19,171;UBERON:0001872,4.98e-18,5;UBERON:0010314,5.57e-18,132;UBERON:0000349,1.96e-17,5;UBERON:0007023,3.62e-16,114;UBERON:0011216,1.25e-15,223;UBERON:0001870,1.02e-13,3;UBERON:0000025,1.48e-11,192;UBERON:0002420,5.05e-10,9;UBERON:0007245,5.05e-10,9;UBERON:0010009,5.05e-10,9;UBERON:0010011,5.05e-10,9;UBERON:0000454,5.05e-10,9;UBERON:0004111,1.05e-08,240 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670065061337395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,1.82870241333667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87733098438087,0.556608588971108,5.98841394003583,0,0,0,0,0,0,0,0.291604613383254,0,2.65722415744152,0.723578631752448,0,0,0,1.09692698576986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.28501866282686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.759729551470544,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0.600420288709789,0.410716136675979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,1.77064427945048,0,0,0,0,0,0.971992906528395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54427271986794,2.68457782784319,2.003054891304,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.899209151350433,4.25089728976755,1.11743701340006,1.8460472781668,9.57872445642529,0.760729777106397,0.968853873791107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.742913430802341,4.68646859168308,1.86018116851066,0.443910671357348,6.56369770821863,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0.72350050919134,0,0,0,0.785577949580009,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49581278420012,6.98161104544604,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670065061337395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,1.82870241333667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87733098438087,0.556608588971108,5.98841394003583,0,0,0,0,0,0,0,0.291604613383254,0,2.65722415744152,0.723578631752448,0,0,0,1.09692698576986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.28501866282686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.759729551470544,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0.600420288709789,0.410716136675979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,1.77064427945048,0,0,0,0,0,0.971992906528395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54427271986794,2.68457782784319,2.003054891304,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.899209151350433,4.25089728976755,1.11743701340006,1.8460472781668,9.57872445642529,0.760729777106397,0.968853873791107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.742913430802341,4.68646859168308,1.86018116851066,0.443910671357348,6.56369770821863,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0.72350050919134,0,0,0,0.785577949580009,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49581278420012,6.98161104544604,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:10504367..10504380,+ | |short_description=p@chr10:10504367..10504380,+ | ||
}} | }} |
Latest revision as of 09:57, 23 July 2015
Short description: | p@chr10:10504367..10504380, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:10504367..10504380, + |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data