FFCP PHASE1:Mm9::chr13:119447485..119447533,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=11 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=16bp_to_uc007ryu.1_5end | |association_with_transcript=16bp_to_uc007ryu.1_5end | ||
|cluster_id=chr13:119447485..119447533,- | |||
|description=CAGE_peak_1_at_uc007ryu.1_5end | |description=CAGE_peak_1_at_uc007ryu.1_5end | ||
|id=chr13:119447485..119447533,- | |id=chr13:119447485..119447533,- | ||
|ontology_enrichment_celltype=CL:0002563!4.36e-07!9;CL:0002251!4.36e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002250,2.43e-08,3;CL:0002563,5.38e-07,9;CL:0002251,5.38e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.47e-18!43;UBERON:0005409!1.34e-13!59;UBERON:0000344!3.62e-11!15;UBERON:0002113!3.97e-11!14;UBERON:0003918!3.97e-11!14;UBERON:0005095!3.97e-11!14;UBERON:0007687!3.97e-11!14;UBERON:0001242!1.26e-09!13;UBERON:0000060!1.26e-09!13;UBERON:0001262!1.26e-09!13;UBERON:0004786!1.26e-09!13;UBERON:0006554!2.33e-09!16;UBERON:0001008!1.24e-08!17;UBERON:0003350!4.36e-07!9;UBERON:0004808!4.36e-07!9;UBERON:0001277!4.36e-07!9;UBERON:0004923!6.82e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.42e-40,31;UBERON:0005409,1.32e-27,47;UBERON:0002113,6.95e-15,14;UBERON:0003918,6.95e-15,14;UBERON:0011143,6.95e-15,14;UBERON:0005095,6.95e-15,14;UBERON:0007687,6.95e-15,14;UBERON:0001242,9.59e-12,13;UBERON:0001262,9.59e-12,13;UBERON:0004786,9.59e-12,13;UBERON:0006554,3.36e-11,18;UBERON:0001008,1.60e-10,19;UBERON:0000344,5.21e-10,15;UBERON:0000489,2.32e-09,21;UBERON:0004921,2.56e-08,114;UBERON:0001007,4.36e-08,116;UBERON:0001555,4.36e-08,116;UBERON:0007026,4.36e-08,116;UBERON:0004119,7.30e-08,118;UBERON:0000925,7.30e-08,118;UBERON:0006595,7.30e-08,118;UBERON:0003350,5.38e-07,9;UBERON:0004808,5.38e-07,9;UBERON:0001277,5.38e-07,9;UBERON:0002108,8.13e-07,4 | |||
|phase1_expression=0,0,0.909998478779072,3.32710632437513,3.00537437967808,0,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0.319984845586813,0.22940928106717,0.57423196411502,0.86152399231815,0.646413698057667,7.41091335879858,2.01624103807945,0,0,0,0,3.75507105676657,1.99481574430191,3.87921776898501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,2.2836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.59175283654366,0,0,2.81002760729451,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.63460661282178,3.96675849995316,0,0,0.644337306610467,1.61346819698674,1.33426826306922,1.52180500890047,5.21981967698963,2.30578536613615,3.01602250560323,2.38747766449381,4.67913809085888,4.49409704327111,7.13255564586491,5.57595565112228,0,1.71372768914593,1.1270773567308,5.7022371796688,4.65485969202302,5.11991485199326,11.3825766823663,21.6986917530015,31.7137430239577,20.7307235388625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0,0,0,0,0,0,0,6.12109756922687,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324016022465404,0,0,0,0,0,14.2576470620972,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0.64183841918363,0,0.25347929989024,0,0.187283014939765,0.384150914429216,0.287177344778066,0,0.579421629724277,0.192909220463705,0,0,0.685738504770831,0.70990322463735,0,0.145346416632329,0.376437521661322,0.338458431566706,0.182927972872773,0,0.950628796921032,0,0.355905054372522,0.197008964751127,0,0,0.192906610981141,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,0,0.909998478779072,3.32710632437513,3.00537437967808,0,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0.319984845586813,0.22940928106717,0.57423196411502,0.86152399231815,0.646413698057667,7.41091335879858,2.01624103807945,0,0,0,0,3.75507105676657,1.99481574430191,3.87921776898501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,2.2836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.59175283654366,0,0,2.81002760729451,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.63460661282178,3.96675849995316,0,0,0.644337306610467,1.61346819698674,1.33426826306922,1.52180500890047,5.21981967698963,2.30578536613615,3.01602250560323,2.38747766449381,4.67913809085888,4.49409704327111,7.13255564586491,5.57595565112228,0,1.71372768914593,1.1270773567308,5.7022371796688,4.65485969202302,5.11991485199326,11.3825766823663,21.6986917530015,31.7137430239577,20.7307235388625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0,0,0,0,0,0,0,6.12109756922687,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324016022465404,0,0,0,0,0,14.2576470620972,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0.64183841918363,0,0.25347929989024,0,0.187283014939765,0.384150914429216,0.287177344778066,0,0.579421629724277,0.192909220463705,0,0,0.685738504770831,0.70990322463735,0,0.145346416632329,0.376437521661322,0.338458431566706,0.182927972872773,0,0.950628796921032,0,0.355905054372522,0.197008964751127,0,0,0.192906610981141,0,0.233931608445408,0,0,0,0 | ||
|short_description=p1@uc007ryu.1 | |short_description=p1@uc007ryu.1 | ||
}} | }} |
Latest revision as of 15:56, 5 August 2015
Short description: | p1@uc007ryu.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_uc007ryu.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:11 |
Association with transcript: | 16bp_to_uc007ryu.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 2.43e-08 | 3 |
intestinal epithelial cell | 5.38e-07 | 9 |
epithelial cell of alimentary canal | 5.38e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.42e-40 | 31 |
gastrointestinal system | 1.32e-27 | 47 |
kidney | 6.95e-15 | 14 |
kidney mesenchyme | 6.95e-15 | 14 |
upper urinary tract | 6.95e-15 | 14 |
kidney rudiment | 6.95e-15 | 14 |
kidney field | 6.95e-15 | 14 |
intestinal mucosa | 9.59e-12 | 13 |
wall of intestine | 9.59e-12 | 13 |
gastrointestinal system mucosa | 9.59e-12 | 13 |
urinary system structure | 3.36e-11 | 18 |
renal system | 1.60e-10 | 19 |
mucosa | 5.21e-10 | 15 |
cavitated compound organ | 2.32e-09 | 21 |
subdivision of digestive tract | 2.56e-08 | 114 |
digestive system | 4.36e-08 | 116 |
digestive tract | 4.36e-08 | 116 |
primitive gut | 4.36e-08 | 116 |
endoderm-derived structure | 7.30e-08 | 118 |
endoderm | 7.30e-08 | 118 |
presumptive endoderm | 7.30e-08 | 118 |
epithelium of mucosa | 5.38e-07 | 9 |
gastrointestinal system epithelium | 5.38e-07 | 9 |
intestinal epithelium | 5.38e-07 | 9 |
small intestine | 8.13e-07 | 4 |