FFCP PHASE1:Mm9::chr11:79474243..79474254,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=268451 | |EntrezGene=268451 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=7 | |||
|TSSclassifier=NA | |||
|UniProt=F6YI06 | |UniProt=F6YI06 | ||
|association_with_transcript=-74bp_to_ENSMUST00000092864_5end | |association_with_transcript=-74bp_to_ENSMUST00000092864_5end | ||
|cluster_id=chr11:79474243..79474254,+ | |||
|description=CAGE_peak_7_at_Rab11fip4_5end | |description=CAGE_peak_7_at_Rab11fip4_5end | ||
|id=chr11:79474243..79474254,+ | |id=chr11:79474243..79474254,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!5.71e-12!63;UBERON:0000955!1.97e-11!50;UBERON:0006238!1.97e-11!50;UBERON:0001017!7.00e-11!73;UBERON:0005743!7.00e-11!73;UBERON:0002616!1.16e-10!49;UBERON:0000073!3.01e-10!75;UBERON:0001016!3.01e-10!75;UBERON:0004121!1.26e-09!102;UBERON:0000924!1.26e-09!102;UBERON:0006601!1.26e-09!102;UBERON:0001049!3.46e-09!52;UBERON:0005068!3.46e-09!52;UBERON:0006241!3.46e-09!52;UBERON:0007135!3.46e-09!52;UBERON:0007811!4.56e-08!86;UBERON:0000153!5.09e-08!94;UBERON:0002298!5.62e-07!6;UBERON:0002113!6.65e-07!14;UBERON:0003918!6.65e-07!14;UBERON:0005095!6.65e-07!14;UBERON:0007687!6.65e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004733,5.19e-13,6;UBERON:0004732,5.19e-13,6;UBERON:0002028,5.19e-13,6;UBERON:0007277,5.19e-13,6;UBERON:0001017,4.94e-08,73;UBERON:0002950,5.13e-08,4;UBERON:0001891,5.13e-08,4;UBERON:0009616,5.13e-08,4;UBERON:0010286,5.13e-08,4;UBERON:0002113,9.38e-08,14;UBERON:0003918,9.38e-08,14;UBERON:0011143,9.38e-08,14;UBERON:0005095,9.38e-08,14;UBERON:0007687,9.38e-08,14;UBERON:0001016,9.81e-08,75;UBERON:0000955,1.31e-07,47;UBERON:0006238,1.31e-07,47;UBERON:0002037,1.43e-07,4;UBERON:0002680,1.43e-07,4;UBERON:0001895,1.43e-07,4;UBERON:0010092,1.43e-07,4;UBERON:0006215,1.43e-07,4;UBERON:0000073,2.03e-07,54;UBERON:0001896,2.45e-07,2;UBERON:0002298,2.45e-07,2;UBERON:0005290,2.45e-07,2;UBERON:0010096,2.45e-07,2 | |||
|phase1_expression=0.160148847104794,0,0,0,1.50268718983904,0,0,0.129123323441576,5.06839399746,5.85161315804984,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09012578190223,0,0,0.55994568650145,1.43752564364972,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0.299600110518405,1.53687322128622,0,0,0,0.285650984403804,0,0,0,0,1.10115880999389,1.40456071893706,0.307213066512487,0.131886287730194,0.182975287204819,0,1.11673199600552,1.68828783009504,0.763991238884051,0.294628585473668,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0.985903938436763,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0,0,0,0,0.988779870937496,0,0,0.485300549842228,0,0,0,1.46390398505774,1.46612694769419,0,0,0,0,2.69623150928681,0.457500602818626,0,1.04294592115366,2.04572365864264,1.24672826735736,2.10913641988085,0,0.622034853050465,2.27450482590307,0,0.130120442962704,0,0,0,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0,0.189106080167819,0.175951124163949,0,0.834141747676794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0.841159794256509,0.102904612379284,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,1.1270773567308,0.203651327845314,0.775809948670503,1.05203729835478,1.7706230394792,1.18088118383682,1.56998727841375,0.863780147452604,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0.482443521363367,0.184753190166605,0,0,0,0,0.167506257441816,0,0.390267295715598,0,0,0,0,0,0,0,0,0.491764273019036,0,1.12385412991454,1.75817529888305,0,0,0,0,0,0,0,0,0,0,0,2.57057053137446,0.141940085208269,0.178065603667255,0,0.329940245945071,0,0.242780636154981,0.302323556964751,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.258717367565509,0.214337035031592,0,0.178368817602071,0,0.608929898229199,0.23467170806371,0,0,0.16488625294148,0,0,0,0,0,0.741701208042039,0,0,0.185194527369712,0,0,0,0,0,0.138199973804424,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0.129614973291793,1.86401793926078,0,0,0,0.388902376688095,0.258319646955462,0,0.117357238645754,0.781226309063701,1.04859344425711,0.483168241652012,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0.221985953374065,0,0,0,0,0.183151624267265,0,0,0,0.920650473014354,0,0.171853182343688,0,0.755393897389701,0.675022500231806,0.45032120322422,0.453142408984205,0,0.103787347584177,0,0.170733605754134,0,0,0.183843508450014,0,0,0,0,0,0,0.0936415074698824,0,0,0.476293691283074,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.409231043169689,0,0.192906610981141,0,0,0.214871054048298,0,0,0.463735671240843 | |phase1_expression=0.160148847104794,0,0,0,1.50268718983904,0,0,0.129123323441576,5.06839399746,5.85161315804984,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09012578190223,0,0,0.55994568650145,1.43752564364972,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0.299600110518405,1.53687322128622,0,0,0,0.285650984403804,0,0,0,0,1.10115880999389,1.40456071893706,0.307213066512487,0.131886287730194,0.182975287204819,0,1.11673199600552,1.68828783009504,0.763991238884051,0.294628585473668,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0.985903938436763,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0,0,0,0,0.988779870937496,0,0,0.485300549842228,0,0,0,1.46390398505774,1.46612694769419,0,0,0,0,2.69623150928681,0.457500602818626,0,1.04294592115366,2.04572365864264,1.24672826735736,2.10913641988085,0,0.622034853050465,2.27450482590307,0,0.130120442962704,0,0,0,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0,0.189106080167819,0.175951124163949,0,0.834141747676794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0.841159794256509,0.102904612379284,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,1.1270773567308,0.203651327845314,0.775809948670503,1.05203729835478,1.7706230394792,1.18088118383682,1.56998727841375,0.863780147452604,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0.482443521363367,0.184753190166605,0,0,0,0,0.167506257441816,0,0.390267295715598,0,0,0,0,0,0,0,0,0.491764273019036,0,1.12385412991454,1.75817529888305,0,0,0,0,0,0,0,0,0,0,0,2.57057053137446,0.141940085208269,0.178065603667255,0,0.329940245945071,0,0.242780636154981,0.302323556964751,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.258717367565509,0.214337035031592,0,0.178368817602071,0,0.608929898229199,0.23467170806371,0,0,0.16488625294148,0,0,0,0,0,0.741701208042039,0,0,0.185194527369712,0,0,0,0,0,0.138199973804424,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0.129614973291793,1.86401793926078,0,0,0,0.388902376688095,0.258319646955462,0,0.117357238645754,0.781226309063701,1.04859344425711,0.483168241652012,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0.221985953374065,0,0,0,0,0.183151624267265,0,0,0,0.920650473014354,0,0.171853182343688,0,0.755393897389701,0.675022500231806,0.45032120322422,0.453142408984205,0,0.103787347584177,0,0.170733605754134,0,0,0.183843508450014,0,0,0,0,0,0,0.0936415074698824,0,0,0.476293691283074,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.409231043169689,0,0.192906610981141,0,0,0.214871054048298,0,0,0.463735671240843 | ||
|short_description=p7@Rab11fip4 | |short_description=p7@Rab11fip4 | ||
}} | }} |
Latest revision as of 18:59, 25 September 2015
Short description: | p7@Rab11fip4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Rab11fip4_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | -74bp_to_ENSMUST00000092864_5end |
EntrezGene: | Rab11fip4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
segmental subdivision of hindbrain | 5.19e-13 | 6 |
segmental subdivision of nervous system | 5.19e-13 | 6 |
hindbrain | 5.19e-13 | 6 |
presumptive hindbrain | 5.19e-13 | 6 |
central nervous system | 4.94e-08 | 73 |
regional part of midbrain | 5.13e-08 | 4 |
midbrain | 5.13e-08 | 4 |
presumptive midbrain | 5.13e-08 | 4 |
midbrain neural tube | 5.13e-08 | 4 |
kidney | 9.38e-08 | 14 |
kidney mesenchyme | 9.38e-08 | 14 |
upper urinary tract | 9.38e-08 | 14 |
kidney rudiment | 9.38e-08 | 14 |
kidney field | 9.38e-08 | 14 |
nervous system | 9.81e-08 | 75 |
brain | 1.31e-07 | 47 |
future brain | 1.31e-07 | 47 |
cerebellum | 1.43e-07 | 4 |
regional part of metencephalon | 1.43e-07 | 4 |
metencephalon | 1.43e-07 | 4 |
future metencephalon | 1.43e-07 | 4 |
rhombic lip | 1.43e-07 | 4 |
regional part of nervous system | 2.03e-07 | 54 |
medulla oblongata | 2.45e-07 | 2 |
brainstem | 2.45e-07 | 2 |
myelencephalon | 2.45e-07 | 2 |
future myelencephalon | 2.45e-07 | 2 |