Personal tools

FFCP PHASE1:Mm9::chr11:117830698..117830730,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=12702
|EntrezGene=12702
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=B1AQL6,O35718
|UniProt=B1AQL6,O35718
|association_with_transcript=-18bp_to_NM_007707,uc007moi.2_5end
|association_with_transcript=-18bp_to_NM_007707,uc007moi.2_5end
|cluster_id=chr11:117830698..117830730,-
|description=CAGE_peak_3_at_Socs3_5end
|description=CAGE_peak_3_at_Socs3_5end
|id=chr11:117830698..117830730,-
|id=chr11:117830698..117830730,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002609,2.39e-18,6;CL:0000791,7.77e-16,9;CL:0000789,7.77e-16,9;CL:0002420,7.77e-16,9;CL:0002419,7.77e-16,9;CL:0000790,7.77e-16,9;CL:0000838,4.30e-15,12;CL:0000542,7.94e-14,13;CL:0000051,7.94e-14,13;CL:0000624,4.09e-13,8;CL:0000084,9.09e-13,11;CL:0000827,9.09e-13,11;CL:0000738,2.98e-10,17;CL:0002087,2.98e-10,17;CL:0002608,5.44e-10,3;CL:0000117,6.91e-09,23;CL:0000337,6.91e-09,23;CL:0000893,3.90e-08,6;CL:0002489,3.90e-08,6;CL:0000898,3.90e-08,6;CL:0000809,3.90e-08,6;CL:0000810,3.90e-08,6;CL:0000895,3.90e-08,6;CL:0000808,3.90e-08,6;CL:0000894,3.90e-08,6;CL:0000806,3.90e-08,6;CL:0000807,3.90e-08,6;CL:0000805,3.90e-08,6;CL:0002425,3.90e-08,6;CL:0002436,3.90e-08,6;CL:0002427,3.90e-08,6;CL:0002428,3.90e-08,6;CL:0002429,3.90e-08,6;CL:0002433,3.90e-08,6;CL:0002431,3.90e-08,6;CL:0002432,3.90e-08,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007811!3.16e-10!86;UBERON:0000153!1.02e-09!94;UBERON:0003056!3.71e-07!49
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.17e-10,23;UBERON:0000974,1.17e-10,23;UBERON:0004807,1.17e-10,23;UBERON:0005058,1.17e-10,23;UBERON:0003351,1.17e-10,23;UBERON:0009113,1.17e-10,23;UBERON:0003295,1.17e-10,23;UBERON:0009722,1.17e-10,23;UBERON:0005562,1.17e-10,23;UBERON:0007690,1.17e-10,23;UBERON:0006562,3.88e-10,24;UBERON:0003408,3.88e-10,24;UBERON:0001557,3.88e-10,24;UBERON:0001042,3.88e-10,24;UBERON:0008814,3.88e-10,24;UBERON:0009145,3.88e-10,24;UBERON:0007811,5.99e-09,36;UBERON:0000072,8.35e-09,27;UBERON:0004177,4.52e-08,29;UBERON:0005057,4.52e-08,29;UBERON:0000956,6.82e-08,21;UBERON:0001869,6.82e-08,21;UBERON:0000203,6.82e-08,21;UBERON:0000153,4.11e-07,43;UBERON:0001954,5.50e-07,7;UBERON:0003022,5.50e-07,7;UBERON:0002421,5.50e-07,7;UBERON:0000349,5.50e-07,7;UBERON:0002600,5.50e-07,7
|phase1_expression=0.480446541314382,0,0,1.20985684522732,0.500895729946347,0.16787927191189,0.233612640595526,1.42035655785734,1.12630977721333,3.04283884218592,0,0,2.39681021903688,3.2345548895029,0,0.202475267389826,0,0.473193248037357,0,0.84877930359606,0.0850432901510698,0.0992909512008853,0.261199789138935,0.159992422793407,0,0,0.430761996159075,0,0,0,0,0,0.61506478758457,0,0,0,0.204169356262369,0.418531630736908,0.7813353445238,0.523523743973798,0,0.683045484958446,0.485510353031154,0.125896817975577,0.101376931219515,0,1.56478268869608,0,0,0,0,0,2.18117387875057,9.42970784614748,6.04968838456435,0,0.286533439938757,0,1.21389876515759,0.528990979272033,1.26766280701236,0,0.889294796111139,0,0.988866362566974,0,0.299600110518405,0,3.42175720617976,3.10513658162888,2.3135745748652,0.285650984403804,0.220868540951614,2.57230678351403,2.39613677545591,3.67687514644008,0,0.255374676170375,0.153606533256243,0.527545150920775,1.09785172322892,0.52091337055676,0,0,0,0.294628585473668,0.142371680799103,0.372798891650601,0,0.151143120213571,0.579728977403356,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0.517875767294343,0.148442139064825,0.173485326766136,0,0.230615497256059,0,0.117588707135705,0,0.494389935468748,0.433798070759735,0,0,0.220841518460394,0,0,0,0,0.255457055208591,0.239630249011841,0.599902730993408,0.508280908292259,0.299581278809645,0,0.125654352112864,0.695297280769106,0,0,0,0,0.124406970610093,0,0.420883711772948,0.130120442962704,1.37941262660084,0.900310649026746,0.90422890701429,1.08858398642125,0.2562274405697,0.468508622798644,0.258703370739016,0,0.189106080167819,0.351902248327898,0.219195732427575,0,0.348252166522167,0,0.59710280045548,0.702213187313235,0.257347907114715,0.284163499395593,0,0.234526059981096,0.180062061461015,0,0,0,0.697601834251224,0.268273401399619,0.116765342367169,0,0,0.243206428637567,0.730999937126662,0.658650345873152,0,0,1.13195073617213,0.660837565967596,0,0.426576501070468,0.464473343720877,0.257734922644187,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0,0,0,0,0,0,0.379335801906163,0.228497025219458,0,0.407302655690628,0,0.210407459670956,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0.312037673114561,0.252578877947112,0,0,0,0.189491411770485,0,0.169745085775188,0.234690248288502,0.335012514883631,0,0.195133647857799,0.315270288212382,0,0,0.327726629431476,0.345369963731791,0.144649058581512,0,0.54390568381871,0,0.275936746304732,0,0,0,0.252470927204373,0.315508219416257,0.780877488593277,0.430846795465598,0,0.222798674082394,0,0,0,0,0,0.141940085208269,0.35613120733451,0.488660878060728,0.164970122972535,0,0,0,0,0.295301892880773,0,0.258428293168221,0,0,0.316036757935816,0,0,0.340439605753788,0.720244376125241,0.646793418913773,0.428674070063185,0.354680467284547,1.07021290561242,0.329098041204242,0.608929898229199,0,0,0,0.32977250588296,0.161464426695906,0.0603129249281559,0.358117032009409,0,0,0,0.170870880797853,0,0.185194527369712,0,0,0.228778173206523,0.169978429993855,0.559805809294632,1.10559979043539,0,0.316335993581135,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0.448549638131936,0.165458490457098,0.388902376688095,0.129159823477731,0,0.234714477291508,0.2604087696879,0.209718688851422,0,0,1.58005560314089,0.405450430580328,0.718976700153791,0.51968329191118,0.716106782669926,1.39076948346885,0.600977247599844,1.32920574457119,1.11063094942962,1.295515713135,1.31074040677893,0.877120926657772,0.865906574762965,0.701261413089414,0.226730383615211,0.221985953374065,0.0897138566094757,0.167884616364078,0,0,0.183151624267265,0,0,0.564751842617067,0,1.14579102687879,0.68741272937475,0.685082519770642,0,0.675022500231806,0.45032120322422,0.906284817968409,0,0.62272408550506,0.399024873401031,0.170733605754134,0.729320151204882,0.419226325255965,0.367687016900028,0.44449345560323,0.206035057238894,0,0,0,0.377252682772152,0.187283014939765,0.256100609619477,0.287177344778066,0,0.231768651889711,0,0.412085900803307,0,0.342869252385415,0,0.238436189947321,0.581385666529314,0,0.338458431566706,0.365855945745545,0,0.679020569229309,0,0.237270036248348,0,0.409231043169689,0.154936841185966,0,1.24905288968973,0.701794825336225,0,0,0,0
|phase1_expression=0.480446541314382,0,0,1.20985684522732,0.500895729946347,0.16787927191189,0.233612640595526,1.42035655785734,1.12630977721333,3.04283884218592,0,0,2.39681021903688,3.2345548895029,0,0.202475267389826,0,0.473193248037357,0,0.84877930359606,0.0850432901510698,0.0992909512008853,0.261199789138935,0.159992422793407,0,0,0.430761996159075,0,0,0,0,0,0.61506478758457,0,0,0,0.204169356262369,0.418531630736908,0.7813353445238,0.523523743973798,0,0.683045484958446,0.485510353031154,0.125896817975577,0.101376931219515,0,1.56478268869608,0,0,0,0,0,2.18117387875057,9.42970784614748,6.04968838456435,0,0.286533439938757,0,1.21389876515759,0.528990979272033,1.26766280701236,0,0.889294796111139,0,0.988866362566974,0,0.299600110518405,0,3.42175720617976,3.10513658162888,2.3135745748652,0.285650984403804,0.220868540951614,2.57230678351403,2.39613677545591,3.67687514644008,0,0.255374676170375,0.153606533256243,0.527545150920775,1.09785172322892,0.52091337055676,0,0,0,0.294628585473668,0.142371680799103,0.372798891650601,0,0.151143120213571,0.579728977403356,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0.517875767294343,0.148442139064825,0.173485326766136,0,0.230615497256059,0,0.117588707135705,0,0.494389935468748,0.433798070759735,0,0,0.220841518460394,0,0,0,0,0.255457055208591,0.239630249011841,0.599902730993408,0.508280908292259,0.299581278809645,0,0.125654352112864,0.695297280769106,0,0,0,0,0.124406970610093,0,0.420883711772948,0.130120442962704,1.37941262660084,0.900310649026746,0.90422890701429,1.08858398642125,0.2562274405697,0.468508622798644,0.258703370739016,0,0.189106080167819,0.351902248327898,0.219195732427575,0,0.348252166522167,0,0.59710280045548,0.702213187313235,0.257347907114715,0.284163499395593,0,0.234526059981096,0.180062061461015,0,0,0,0.697601834251224,0.268273401399619,0.116765342367169,0,0,0.243206428637567,0.730999937126662,0.658650345873152,0,0,1.13195073617213,0.660837565967596,0,0.426576501070468,0.464473343720877,0.257734922644187,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0,0,0,0,0,0,0.379335801906163,0.228497025219458,0,0.407302655690628,0,0.210407459670956,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0.312037673114561,0.252578877947112,0,0,0,0.189491411770485,0,0.169745085775188,0.234690248288502,0.335012514883631,0,0.195133647857799,0.315270288212382,0,0,0.327726629431476,0.345369963731791,0.144649058581512,0,0.54390568381871,0,0.275936746304732,0,0,0,0.252470927204373,0.315508219416257,0.780877488593277,0.430846795465598,0,0.222798674082394,0,0,0,0,0,0.141940085208269,0.35613120733451,0.488660878060728,0.164970122972535,0,0,0,0,0.295301892880773,0,0.258428293168221,0,0,0.316036757935816,0,0,0.340439605753788,0.720244376125241,0.646793418913773,0.428674070063185,0.354680467284547,1.07021290561242,0.329098041204242,0.608929898229199,0,0,0,0.32977250588296,0.161464426695906,0.0603129249281559,0.358117032009409,0,0,0,0.170870880797853,0,0.185194527369712,0,0,0.228778173206523,0.169978429993855,0.559805809294632,1.10559979043539,0,0.316335993581135,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0.448549638131936,0.165458490457098,0.388902376688095,0.129159823477731,0,0.234714477291508,0.2604087696879,0.209718688851422,0,0,1.58005560314089,0.405450430580328,0.718976700153791,0.51968329191118,0.716106782669926,1.39076948346885,0.600977247599844,1.32920574457119,1.11063094942962,1.295515713135,1.31074040677893,0.877120926657772,0.865906574762965,0.701261413089414,0.226730383615211,0.221985953374065,0.0897138566094757,0.167884616364078,0,0,0.183151624267265,0,0,0.564751842617067,0,1.14579102687879,0.68741272937475,0.685082519770642,0,0.675022500231806,0.45032120322422,0.906284817968409,0,0.62272408550506,0.399024873401031,0.170733605754134,0.729320151204882,0.419226325255965,0.367687016900028,0.44449345560323,0.206035057238894,0,0,0,0.377252682772152,0.187283014939765,0.256100609619477,0.287177344778066,0,0.231768651889711,0,0.412085900803307,0,0.342869252385415,0,0.238436189947321,0.581385666529314,0,0.338458431566706,0.365855945745545,0,0.679020569229309,0,0.237270036248348,0,0.409231043169689,0.154936841185966,0,1.24905288968973,0.701794825336225,0,0,0,0
|short_description=p3@Socs3
|short_description=p3@Socs3
}}
}}

Latest revision as of 01:22, 27 September 2015

Short description:p3@Socs3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Socs3_5end
Coexpression cluster:NA
Association with transcript: -18bp_to_NM_007707, uc007moi.2_5end
EntrezGene:Socs3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Socs3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.21
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.04
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.40
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.23
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.18
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I99.43
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A16.05
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.42
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.11
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.57
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.40
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.10
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.51
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C61.09
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G11.13
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.11
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.72
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G41.39
thymus, neonate N02.CNhs11181.1541-43F80.60
thymus, neonate N03.CNhs11137.2104-43C71.33
thymus, neonate N06.CNhs11197.681-26C41.11
thymus, neonate N07.CNhs11211.713-19D31.30
thymus, neonate N10.CNhs11194.748-24E41.31
thymus, neonate N20.CNhs11186.820-7A20.88
thymus, neonate N25.CNhs11125.1362-25G70.87
thymus, neonate N30.CNhs11132.1393-42G20.70
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron of cerebral cortex2.39e-186
mature alpha-beta T cell7.77e-169
alpha-beta T cell7.77e-169
immature T cell7.77e-169
mature T cell7.77e-169
immature alpha-beta T cell7.77e-169
lymphoid lineage restricted progenitor cell4.30e-1512
lymphocyte7.94e-1413
common lymphoid progenitor7.94e-1413
CD4-positive, alpha-beta T cell4.09e-138
T cell9.09e-1311
pro-T cell9.09e-1311
leukocyte2.98e-1017
nongranular leukocyte2.98e-1017
hippocampal neuron5.44e-103
CNS neuron (sensu Vertebrata)6.91e-0923
neuroblast (sensu Vertebrata)6.91e-0923
thymocyte3.90e-086
double negative thymocyte3.90e-086
naive T cell3.90e-086
double-positive, alpha-beta thymocyte3.90e-086
CD4-positive, alpha-beta thymocyte3.90e-086
naive thymus-derived CD4-positive, alpha-beta T cell3.90e-086
DN4 thymocyte3.90e-086
DN1 thymic pro-T cell3.90e-086
DN2 thymocyte3.90e-086
DN3 thymocyte3.90e-086
immature single positive thymocyte3.90e-086
early T lineage precursor3.90e-086
mature CD4 single-positive thymocyte3.90e-086
resting double-positive thymocyte3.90e-086
double-positive blast3.90e-086
CD69-positive double-positive thymocyte3.90e-086
CD69-positive, CD4-positive single-positive thymocyte3.90e-086
CD4-positive, CD8-intermediate double-positive thymocyte3.90e-086
CD24-positive, CD4 single-positive thymocyte3.90e-086

Uber anatomy
Ontology termp-valuen
thymus1.17e-1023
neck1.17e-1023
respiratory system epithelium1.17e-1023
hemolymphoid system gland1.17e-1023
pharyngeal epithelium1.17e-1023
thymic region1.17e-1023
pharyngeal gland1.17e-1023
entire pharyngeal arch endoderm1.17e-1023
thymus primordium1.17e-1023
early pharyngeal endoderm1.17e-1023
pharynx3.88e-1024
gland of gut3.88e-1024
upper respiratory tract3.88e-1024
chordate pharynx3.88e-1024
pharyngeal arch system3.88e-1024
pharyngeal region of foregut3.88e-1024
craniocervical region5.99e-0936
segment of respiratory tract8.35e-0927
hemopoietic organ4.52e-0829
immune organ4.52e-0829
cerebral cortex6.82e-0821
cerebral hemisphere6.82e-0821
pallium6.82e-0821
anterior region of body4.11e-0743
Ammon's horn5.50e-077
lobe parts of cerebral cortex5.50e-077
hippocampal formation5.50e-077
limbic system5.50e-077
limbic lobe5.50e-077
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr11:117830698..117830730,-&oldid=4285069"