FFCP PHASE1:Mm9::chr11:116704477..116704546,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=107817 | |EntrezGene=107817 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=640 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=48bp_to_ENSMUST00000141735_5end | |association_with_transcript=48bp_to_ENSMUST00000141735_5end | ||
|cluster_id=chr11:116704477..116704546,- | |||
|description=CAGE_peak_2_at_Jmjd6_5end | |description=CAGE_peak_2_at_Jmjd6_5end | ||
|id=chr11:116704477..116704546,- | |id=chr11:116704477..116704546,- | ||
|ontology_enrichment_celltype=CL:0000838!1.20e-08!12;CL:0000084!5.69e-08!11;CL:0000827!5.69e-08!11;CL:0000542!8.71e-08!13;CL:0000051!8.71e-08!13;CL:0000988!1.23e-07!32;CL:0002032!1.23e-07!32;CL:0000037!1.23e-07!32;CL:0000566!1.23e-07!32;CL:0000837!1.23e-07!32;CL:0000791!3.81e-07!9;CL:0000789!3.81e-07!9;CL:0002420!3.81e-07!9;CL:0002419!3.81e-07!9;CL:0000790!3.81e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.20e-08,12;CL:0000084,5.69e-08,11;CL:0000827,5.69e-08,11;CL:0000542,8.71e-08,13;CL:0000051,8.71e-08,13;CL:0000988,1.23e-07,32;CL:0002032,1.23e-07,32;CL:0000037,1.23e-07,32;CL:0000837,1.23e-07,32;CL:0000791,3.81e-07,9;CL:0000789,3.81e-07,9;CL:0002420,3.81e-07,9;CL:0002419,3.81e-07,9;CL:0000790,3.81e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003408!7.05e-09!24;UBERON:0002370!7.65e-09!23;UBERON:0000974!7.65e-09!23;UBERON:0004807!7.65e-09!23;UBERON:0005058!7.65e-09!23;UBERON:0003351!7.65e-09!23;UBERON:0009113!7.65e-09!23;UBERON:0003295!7.65e-09!23;UBERON:0009722!7.65e-09!23;UBERON:0005562!7.65e-09!23;UBERON:0007690!7.65e-09!23;UBERON:0006562!1.21e-08!24;UBERON:0001557!1.21e-08!24;UBERON:0001042!1.21e-08!24;UBERON:0008814!1.21e-08!24;UBERON:0009145!1.21e-08!24;UBERON:0004177!1.61e-07!29;UBERON:0003081!2.26e-07!88;UBERON:0001004!6.37e-07!42;UBERON:0000065!8.06e-07!41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003408,7.05e-09,24;UBERON:0002370,7.65e-09,23;UBERON:0000974,7.65e-09,23;UBERON:0004807,7.65e-09,23;UBERON:0005058,7.65e-09,23;UBERON:0003351,7.65e-09,23;UBERON:0009113,7.65e-09,23;UBERON:0003295,7.65e-09,23;UBERON:0009722,7.65e-09,23;UBERON:0005562,7.65e-09,23;UBERON:0007690,7.65e-09,23;UBERON:0006562,1.21e-08,24;UBERON:0001557,1.21e-08,24;UBERON:0001042,1.21e-08,24;UBERON:0008814,1.21e-08,24;UBERON:0009145,1.21e-08,24;UBERON:0004177,1.61e-07,29;UBERON:0005057,1.61e-07,29;UBERON:0000077,1.72e-07,35;UBERON:0003081,5.16e-07,87;UBERON:0001004,6.37e-07,42;UBERON:0000065,8.06e-07,41 | |||
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| ||
|short_description=p2@Jmjd6 | |short_description=p2@Jmjd6 | ||
}} | }} |
Latest revision as of 00:40, 27 September 2015
Short description: | p2@Jmjd6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Jmjd6_5end |
Coexpression cluster: | MCL_coexpression_mm9:640 |
Association with transcript: | 48bp_to_ENSMUST00000141735_5end |
EntrezGene: | Jmjd6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.20e-08 | 12 |
T cell | 5.69e-08 | 11 |
pro-T cell | 5.69e-08 | 11 |
lymphocyte | 8.71e-08 | 13 |
common lymphoid progenitor | 8.71e-08 | 13 |
hematopoietic cell | 1.23e-07 | 32 |
hematopoietic oligopotent progenitor cell | 1.23e-07 | 32 |
hematopoietic stem cell | 1.23e-07 | 32 |
hematopoietic multipotent progenitor cell | 1.23e-07 | 32 |
mature alpha-beta T cell | 3.81e-07 | 9 |
alpha-beta T cell | 3.81e-07 | 9 |
immature T cell | 3.81e-07 | 9 |
mature T cell | 3.81e-07 | 9 |
immature alpha-beta T cell | 3.81e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
gland of gut | 7.05e-09 | 24 |
thymus | 7.65e-09 | 23 |
neck | 7.65e-09 | 23 |
respiratory system epithelium | 7.65e-09 | 23 |
hemolymphoid system gland | 7.65e-09 | 23 |
pharyngeal epithelium | 7.65e-09 | 23 |
thymic region | 7.65e-09 | 23 |
pharyngeal gland | 7.65e-09 | 23 |
entire pharyngeal arch endoderm | 7.65e-09 | 23 |
thymus primordium | 7.65e-09 | 23 |
early pharyngeal endoderm | 7.65e-09 | 23 |
pharynx | 1.21e-08 | 24 |
upper respiratory tract | 1.21e-08 | 24 |
chordate pharynx | 1.21e-08 | 24 |
pharyngeal arch system | 1.21e-08 | 24 |
pharyngeal region of foregut | 1.21e-08 | 24 |
hemopoietic organ | 1.61e-07 | 29 |
immune organ | 1.61e-07 | 29 |
mixed endoderm/mesoderm-derived structure | 1.72e-07 | 35 |
lateral plate mesoderm | 5.16e-07 | 87 |
respiratory system | 6.37e-07 | 42 |
respiratory tract | 8.06e-07 | 41 |