FFCP PHASE1:Mm9::chr10:80565428..80565433,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=88 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:80565428..80565433,+ | |||
|description=CAGE_peak_at_chr10:80565428..80565433,+ | |description=CAGE_peak_at_chr10:80565428..80565433,+ | ||
|id=chr10:80565428..80565433,+ | |id=chr10:80565428..80565433,+ | ||
|ontology_enrichment_celltype=CL:0002563!1.03e-42!9;CL:0002251!1.03e-42!9;CL:0000239!2.19e-29!6;CL:0000677!2.19e-29!6;CL:0000212!2.19e-29!6;CL:0000584!2.19e-29!6;CL:0000066!4.96e-26!25;CL:0002076!3.55e-25!15;CL:0000075!3.89e-25!7;CL:0000223!1.39e-18!20;CL:0002250!7.91e-15!3;CL:0000473!1.09e-14!3;CL:0000627!1.09e-14!3;CL:0000682!1.09e-14!3;CL:0000063!1.08e-08!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.46e-52,9;CL:0002251,3.46e-52,9;CL:0000239,1.42e-44,6;CL:0000677,1.42e-44,6;CL:0000584,1.42e-44,6;CL:0000075,3.29e-38,7;CL:0002076,3.60e-31,15;CL:0000066,8.05e-29,25;CL:0000223,2.88e-23,20;CL:0002250,9.09e-11,3;CL:0000682,1.14e-10,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!9.41e-52!15;UBERON:0001242!4.58e-43!13;UBERON:0000060!4.58e-43!13;UBERON:0001262!4.58e-43!13;UBERON:0004786!4.58e-43!13;UBERON:0003350!1.03e-42!9;UBERON:0004808!1.03e-42!9;UBERON:0001277!1.03e-42!9;UBERON:0000485!9.49e-35!11;UBERON:0004923!1.19e-31!24;UBERON:0000160!1.06e-16!43;UBERON:0005409!1.28e-11!59;UBERON:0001962!3.41e-10!2;UBERON:0001961!3.41e-10!2;UBERON:0001744!3.41e-10!2;UBERON:0000064!3.21e-07!99;UBERON:0002465!4.48e-07!3;UBERON:0000331!6.81e-07!3;UBERON:0002116!6.81e-07!3;UBERON:0001204!6.81e-07!3;UBERON:0001168!6.81e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,3.46e-52,9;UBERON:0004808,3.46e-52,9;UBERON:0001277,3.46e-52,9;UBERON:0000344,4.84e-48,15;UBERON:0001242,3.37e-45,13;UBERON:0001262,3.37e-45,13;UBERON:0004786,3.37e-45,13;UBERON:0000485,1.22e-42,11;UBERON:0004923,8.41e-30,24;UBERON:0000160,1.27e-18,31;UBERON:0005409,4.85e-12,47;UBERON:0003199,2.44e-08,1;UBERON:0003929,4.47e-08,55 | |||
|phase1_expression=0,11.8651638597383,9.55498402718026,10.8887116070459,11.520601788766,2.85394762250213,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95995453676044,1.37645568640302,0.57423196411502,6.03066794622705,1.72376986148711,0,1.26015064879965,0.443461021310609,0,0,0,4.33277429626912,0.664938581433969,4.28755648150975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796565093017469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,11.8651638597383,9.55498402718026,10.8887116070459,11.520601788766,2.85394762250213,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95995453676044,1.37645568640302,0.57423196411502,6.03066794622705,1.72376986148711,0,1.26015064879965,0.443461021310609,0,0,0,4.33277429626912,0.664938581433969,4.28755648150975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796565093017469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:80565428..80565433,+ | |short_description=p@chr10:80565428..80565433,+ | ||
}} | }} |
Latest revision as of 20:46, 4 August 2015
Short description: | p@chr10:80565428..80565433, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:80565428..80565433, + |
Coexpression cluster: | MCL_coexpression_mm9:88 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.46e-52 | 9 |
epithelial cell of alimentary canal | 3.46e-52 | 9 |
brush border epithelial cell | 1.42e-44 | 6 |
gut absorptive cell | 1.42e-44 | 6 |
enterocyte | 1.42e-44 | 6 |
columnar/cuboidal epithelial cell | 3.29e-38 | 7 |
endo-epithelial cell | 3.60e-31 | 15 |
epithelial cell | 8.05e-29 | 25 |
endodermal cell | 2.88e-23 | 20 |
intestinal crypt stem cell | 9.09e-11 | 3 |
M cell of gut | 1.14e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 3.46e-52 | 9 |
gastrointestinal system epithelium | 3.46e-52 | 9 |
intestinal epithelium | 3.46e-52 | 9 |
mucosa | 4.84e-48 | 15 |
intestinal mucosa | 3.37e-45 | 13 |
wall of intestine | 3.37e-45 | 13 |
gastrointestinal system mucosa | 3.37e-45 | 13 |
simple columnar epithelium | 1.22e-42 | 11 |
organ component layer | 8.41e-30 | 24 |
intestine | 1.27e-18 | 31 |
gastrointestinal system | 4.85e-12 | 47 |
egg chamber | 2.44e-08 | 1 |
gut epithelium | 4.47e-08 | 55 |