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FFCP PHASE1:Mm9::chr10:79100654..79100667,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=216148
|EntrezGene=216148
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=E9QLZ0,Q8BMC3
|UniProt=E9QLZ0,Q8BMC3
|association_with_transcript=0bp_to_ENSMUST00000020564,ENSMUST00000163867,NM_001024539,uc007fzd.2_5end
|association_with_transcript=0bp_to_ENSMUST00000020564,ENSMUST00000163867,NM_001024539,uc007fzd.2_5end
|cluster_id=chr10:79100654..79100667,-
|description=CAGE_peak_2_at_Shc2_5end
|description=CAGE_peak_2_at_Shc2_5end
|id=chr10:79100654..79100667,-
|id=chr10:79100654..79100667,-
|ontology_enrichment_celltype=CL:0000540!2.23e-19!33;CL:0000047!2.23e-19!33;CL:0000031!2.23e-19!33;CL:0000404!2.23e-19!33;CL:0000221!4.32e-19!44;CL:0000133!4.32e-19!44;CL:0002319!5.45e-19!43;CL:0000393!4.29e-18!39;CL:0000211!4.29e-18!39;CL:0000117!9.89e-18!23;CL:0000337!9.89e-18!23;CL:0000055!2.07e-17!50;CL:0002321!1.56e-07!70;CL:0000220!1.56e-07!70
|ontology_enrichment_celltype_v019_2=CL:0000117,1.76e-47,23;CL:0000337,1.76e-47,23;CL:0000540,3.96e-34,33;CL:0000047,3.96e-34,33;CL:0000031,3.96e-34,33;CL:0000404,3.96e-34,33;CL:0002319,3.39e-29,43;CL:0000221,2.22e-28,44;CL:0000133,2.22e-28,44;CL:0000393,6.66e-28,39;CL:0000211,6.66e-28,39;CL:0002321,2.30e-15,70;CL:0002609,2.00e-12,6;CL:0000723,2.57e-10,91;CL:0000048,2.57e-10,91;CL:0000034,2.75e-09,97;CL:0000120,5.47e-08,3;CL:0002613,1.66e-07,3;CL:0002612,1.75e-07,3;CL:0002614,1.93e-07,3;CL:0002608,2.23e-07,3;CL:0002610,3.30e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!2.21e-26!75;UBERON:0001016!2.21e-26!75;UBERON:0001017!5.00e-26!73;UBERON:0005743!5.00e-26!73;UBERON:0004121!1.97e-22!102;UBERON:0000924!1.97e-22!102;UBERON:0006601!1.97e-22!102;UBERON:0002346!3.14e-17!71;UBERON:0003075!3.14e-17!71;UBERON:0007284!3.14e-17!71;UBERON:0001049!4.13e-16!52;UBERON:0005068!4.13e-16!52;UBERON:0006241!4.13e-16!52;UBERON:0007135!4.13e-16!52;UBERON:0002020!4.28e-16!34;UBERON:0000033!3.62e-15!63;UBERON:0000955!6.61e-15!50;UBERON:0006238!6.61e-15!50;UBERON:0002616!2.59e-14!49;UBERON:0003056!7.31e-14!49;UBERON:0003080!5.01e-13!40;UBERON:0002780!1.31e-12!39;UBERON:0001890!1.31e-12!39;UBERON:0006240!1.31e-12!39;UBERON:0002791!1.75e-12!29;UBERON:0003528!1.75e-12!29;UBERON:0001893!1.75e-12!29;UBERON:0000956!1.37e-07!21;UBERON:0001869!1.37e-07!21;UBERON:0000203!1.37e-07!21;UBERON:0000153!9.20e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.15e-35,73;UBERON:0002020,1.27e-34,34;UBERON:0001016,4.62e-34,75;UBERON:0000073,1.20e-31,54;UBERON:0001049,4.32e-26,52;UBERON:0005068,4.32e-26,52;UBERON:0006241,4.32e-26,52;UBERON:0007135,4.32e-26,52;UBERON:0004121,4.29e-25,95;UBERON:0000924,4.29e-25,95;UBERON:0006601,4.29e-25,95;UBERON:0003528,5.50e-25,29;UBERON:0002791,5.50e-25,29;UBERON:0001893,5.50e-25,29;UBERON:0002780,3.67e-21,39;UBERON:0001890,3.67e-21,39;UBERON:0006240,3.67e-21,39;UBERON:0003080,1.71e-20,40;UBERON:0000955,3.79e-20,47;UBERON:0006238,3.79e-20,47;UBERON:0002346,6.90e-20,64;UBERON:0003075,6.90e-20,64;UBERON:0007284,6.90e-20,64;UBERON:0002616,8.16e-19,46;UBERON:0010371,1.40e-16,73;UBERON:0003056,1.04e-15,49;UBERON:0000956,9.16e-14,21;UBERON:0001869,9.16e-14,21;UBERON:0000203,9.16e-14,21;UBERON:0002420,1.94e-13,8;UBERON:0007245,1.94e-13,8;UBERON:0010009,1.94e-13,8;UBERON:0010011,1.94e-13,8;UBERON:0000454,1.94e-13,8;UBERON:0010314,9.69e-12,92;UBERON:0001948,9.84e-12,5;UBERON:0002315,9.84e-12,5;UBERON:0002240,1.08e-09,6;UBERON:0005174,1.08e-09,6;UBERON:0001137,1.08e-09,6;UBERON:0011216,1.30e-08,194;UBERON:0002619,1.93e-08,17;UBERON:0000025,3.46e-08,114;UBERON:0000369,9.89e-08,5;UBERON:0002435,9.89e-08,5;UBERON:0000204,9.89e-08,5;UBERON:0010082,9.89e-08,5;UBERON:0002257,1.75e-07,3;UBERON:0002038,1.93e-07,3;UBERON:0009663,1.93e-07,3;UBERON:0009661,1.93e-07,3;UBERON:0000125,1.93e-07,3;UBERON:0002308,1.93e-07,3;UBERON:0001954,2.15e-07,7;UBERON:0003022,2.15e-07,7;UBERON:0002421,2.15e-07,7;UBERON:0000349,2.15e-07,7;UBERON:0002600,2.15e-07,7;UBERON:0004111,3.19e-07,122;UBERON:0004684,3.30e-07,3;UBERON:0002275,3.30e-07,3
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,0.202753862439029,0.734187008646726,0,0,0.219686182734472,0.194429899074283,0.279972843250725,1.43752564364972,0,0,0,0,0.286533439938757,0,4.04632921719196,3.70293685490423,3.80298842103708,0,0,0,0,0,0.898800331555214,1.15265491596466,1.24427534770173,2.43010688997043,1.26194976810829,4.28476476605705,3.3130281142742,1.46988959057945,2.30029130443767,6.43453150627015,2.20231761998777,2.17068474744819,2.30409799884365,2.2420668914133,4.66586982372289,2.08365348222704,2.23346399201105,2.8138130501584,2.59757021220577,3.24091444021034,3.27454865837937,2.05039390407831,0.454357159999104,0.226714680320357,0,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0.29688427812965,0.693941307064543,0,0,0.452167921657868,0.470354828542819,0,0.247194967734374,0.289198713839823,0,0,0,0,0,1.17112318804619,0,0,0,0,0,0.748953197024114,0.457500602818626,4.39790232395025,1.04294592115366,1.27857728665165,1.0389402227978,1.62241263067758,0.203678727700633,0.124406970610093,0,0,0.260240885925407,0.689706313300419,0.720248519221397,0.150704817835715,0.272145996605311,0.896796041993948,0.187403449119458,0.517406741478031,0.215567992932842,0.567318240503458,0.351902248327898,0.657587197282725,0.556094498451196,0,0,1.19420560091096,0,0,0,0.207125772535502,0,0,0,0.196764231747404,0,0.232533944750408,0,0.116765342367169,0,0,0,0,0.219550115291051,0.134206418760372,1.05144974282064,1.64647379806855,0,0,1.2797295032114,0.928946687441754,0.128867461322093,0,0.22237804384487,0.190225626112559,0,0.164698954724011,0.251335208800269,0.198956472041151,0,0,0,0,0.569003702859245,0.571242563048644,0,0,0.581857461502877,0.0701358198903186,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.325929952884052,0,0,0,0.238043640886014,0,0,0,0.318909537314974,0.163863314715738,0,0,0,0,0,0,0.963303539926752,0.820481806145422,0.163934945376675,0,0.631016438832513,0.390438744296638,0.430846795465598,0.716906393857656,0.891194696329576,0.566153061577665,1.61924280669958,0.584511715822624,0,1.60660658210904,0,0.178065603667255,0.651547837414304,0,0,0.971122544619926,0,0,0,1.22974059177571,0.516856586336442,0,0.356497378384721,0,0,0,0,0.18006109403131,0.388076051348264,0.857348140126369,0.354680467284547,0,0.164549020602121,0.304464949114599,0.469343416127421,0.21183207086382,0.220528398054962,0,0,0.0603129249281559,0.119372344003136,0,0,0.556275906031529,0,0.206386867963223,0,0,0,0,0,0,0,0,0.632671987162271,0.406638934253697,0.216010681643603,0.209088296014469,0,0.269728692769641,0.165306911450672,0,0,0,0,0.149516546043979,0.66183396182839,0.194451188344048,0.774958940866387,0.337912250981556,0.234714477291508,0.5208175393758,0.104859344425711,0.241584120826006,0,0,0.405450430580328,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179427713218951,0.167884616364078,0.19318959403219,0.187682475451182,0.36630324853453,0.214368379079066,0,1.12950368523413,1.84130094602871,0,1.89038500578056,0.685082519770642,0.755393897389701,0,0.900642406448441,0,3.10656187051092,1.03787347584177,0.798049746802062,0.682934423016537,0.243106717068294,0.209613162627982,0.551530525350042,0.44449345560323,0.824140228955577,0.64183841918363,0,0.25347929989024,0.188626341386076,1.03005658216871,0.256100609619477,0.229741875822453,0.476293691283074,0.347652977834566,0.578727661391115,0.412085900803307,0.147198920134397,0,0.177475806159338,0.238436189947321,0.145346416632329,0.752875043322645,0.338458431566706,0.365855945745545,0.263069711437843,0.543216455383447,0.561142271657738,0.237270036248348,0.492522411877817,0.818462086339379,0.929621047115796,0,0.249810577937946,0,0.214871054048298,0.191288332068843,0,0.231867835620421
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,0.202753862439029,0.734187008646726,0,0,0.219686182734472,0.194429899074283,0.279972843250725,1.43752564364972,0,0,0,0,0.286533439938757,0,4.04632921719196,3.70293685490423,3.80298842103708,0,0,0,0,0,0.898800331555214,1.15265491596466,1.24427534770173,2.43010688997043,1.26194976810829,4.28476476605705,3.3130281142742,1.46988959057945,2.30029130443767,6.43453150627015,2.20231761998777,2.17068474744819,2.30409799884365,2.2420668914133,4.66586982372289,2.08365348222704,2.23346399201105,2.8138130501584,2.59757021220577,3.24091444021034,3.27454865837937,2.05039390407831,0.454357159999104,0.226714680320357,0,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0.29688427812965,0.693941307064543,0,0,0.452167921657868,0.470354828542819,0,0.247194967734374,0.289198713839823,0,0,0,0,0,1.17112318804619,0,0,0,0,0,0.748953197024114,0.457500602818626,4.39790232395025,1.04294592115366,1.27857728665165,1.0389402227978,1.62241263067758,0.203678727700633,0.124406970610093,0,0,0.260240885925407,0.689706313300419,0.720248519221397,0.150704817835715,0.272145996605311,0.896796041993948,0.187403449119458,0.517406741478031,0.215567992932842,0.567318240503458,0.351902248327898,0.657587197282725,0.556094498451196,0,0,1.19420560091096,0,0,0,0.207125772535502,0,0,0,0.196764231747404,0,0.232533944750408,0,0.116765342367169,0,0,0,0,0.219550115291051,0.134206418760372,1.05144974282064,1.64647379806855,0,0,1.2797295032114,0.928946687441754,0.128867461322093,0,0.22237804384487,0.190225626112559,0,0.164698954724011,0.251335208800269,0.198956472041151,0,0,0,0,0.569003702859245,0.571242563048644,0,0,0.581857461502877,0.0701358198903186,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.325929952884052,0,0,0,0.238043640886014,0,0,0,0.318909537314974,0.163863314715738,0,0,0,0,0,0,0.963303539926752,0.820481806145422,0.163934945376675,0,0.631016438832513,0.390438744296638,0.430846795465598,0.716906393857656,0.891194696329576,0.566153061577665,1.61924280669958,0.584511715822624,0,1.60660658210904,0,0.178065603667255,0.651547837414304,0,0,0.971122544619926,0,0,0,1.22974059177571,0.516856586336442,0,0.356497378384721,0,0,0,0,0.18006109403131,0.388076051348264,0.857348140126369,0.354680467284547,0,0.164549020602121,0.304464949114599,0.469343416127421,0.21183207086382,0.220528398054962,0,0,0.0603129249281559,0.119372344003136,0,0,0.556275906031529,0,0.206386867963223,0,0,0,0,0,0,0,0,0.632671987162271,0.406638934253697,0.216010681643603,0.209088296014469,0,0.269728692769641,0.165306911450672,0,0,0,0,0.149516546043979,0.66183396182839,0.194451188344048,0.774958940866387,0.337912250981556,0.234714477291508,0.5208175393758,0.104859344425711,0.241584120826006,0,0,0.405450430580328,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179427713218951,0.167884616364078,0.19318959403219,0.187682475451182,0.36630324853453,0.214368379079066,0,1.12950368523413,1.84130094602871,0,1.89038500578056,0.685082519770642,0.755393897389701,0,0.900642406448441,0,3.10656187051092,1.03787347584177,0.798049746802062,0.682934423016537,0.243106717068294,0.209613162627982,0.551530525350042,0.44449345560323,0.824140228955577,0.64183841918363,0,0.25347929989024,0.188626341386076,1.03005658216871,0.256100609619477,0.229741875822453,0.476293691283074,0.347652977834566,0.578727661391115,0.412085900803307,0.147198920134397,0,0.177475806159338,0.238436189947321,0.145346416632329,0.752875043322645,0.338458431566706,0.365855945745545,0.263069711437843,0.543216455383447,0.561142271657738,0.237270036248348,0.492522411877817,0.818462086339379,0.929621047115796,0,0.249810577937946,0,0.214871054048298,0.191288332068843,0,0.231867835620421
|short_description=p2@Shc2
|short_description=p2@Shc2
}}
}}

Latest revision as of 08:47, 26 September 2015

Short description:p2@Shc2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Shc2_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: 0bp_to_ENSMUST00000020564, ENSMUST00000163867, NM_001024539, uc007fzd.2_5end
EntrezGene:Shc2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Shc2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C34.05
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.24
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.43
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.31
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.47
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.30
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.17
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.24
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.67
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.23
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.60
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.24
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.05
Mouse Schwann, donor1.CNhs12507.11728-123D90.45
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.75
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F14.40
cortex, adult.CNhs10473.12-14D51.04
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B21.62
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.27
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G11.65
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.96
medulla oblongata, neonate N30.CNhs11200.1396-42A30.82
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.89
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I81.04
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system3.15e-3573
gray matter1.27e-3434
nervous system4.62e-3475
regional part of nervous system1.20e-3154
neural tube4.32e-2652
neural rod4.32e-2652
future spinal cord4.32e-2652
neural keel4.32e-2652
ectoderm-derived structure4.29e-2595
ectoderm4.29e-2595
presumptive ectoderm4.29e-2595
brain grey matter5.50e-2529
regional part of telencephalon5.50e-2529
telencephalon5.50e-2529
regional part of forebrain3.67e-2139
forebrain3.67e-2139
future forebrain3.67e-2139
anterior neural tube1.71e-2040
brain3.79e-2047
future brain3.79e-2047
neurectoderm6.90e-2064
neural plate6.90e-2064
presumptive neural plate6.90e-2064
regional part of brain8.16e-1946
ecto-epithelium1.40e-1673
pre-chordal neural plate1.04e-1549
cerebral cortex9.16e-1421
cerebral hemisphere9.16e-1421
pallium9.16e-1421
basal ganglion1.94e-138
nuclear complex of neuraxis1.94e-138
aggregate regional part of brain1.94e-138
collection of basal ganglia1.94e-138
cerebral subcortex1.94e-138
structure with developmental contribution from neural crest9.69e-1292
regional part of spinal cord9.84e-125
gray matter of spinal cord9.84e-125
spinal cord1.08e-096
dorsal region element1.08e-096
dorsum1.08e-096
organ system subdivision1.30e-08194
regional part of cerebral cortex1.93e-0817
tube3.46e-08114
corpus striatum9.89e-085
striatum9.89e-085
ventral part of telencephalon9.89e-085
future corpus striatum9.89e-085
ventral horn of spinal cord1.75e-073
substantia nigra1.93e-073
telencephalic nucleus1.93e-073
midbrain nucleus1.93e-073
neural nucleus1.93e-073
nucleus of brain1.93e-073
Ammon's horn2.15e-077
lobe parts of cerebral cortex2.15e-077
hippocampal formation2.15e-077
limbic system2.15e-077
limbic lobe2.15e-077
anatomical conduit3.19e-07122
raphe nuclei3.30e-073
reticular formation3.30e-073
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