Personal tools

FFCP PHASE1:Mm9::chr10:79076757..79076800,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=237397
|EntrezGene=237397
|HGNC=
|HGNC=
|MCL_coexpression_id=87
|TSSclassifier=NA
|UniProt=Q5HZI2
|UniProt=Q5HZI2
|association_with_transcript=0bp_to_ENSMUST00000059699,NM_001168624,NM_198614,uc007fzb.2,uc007fzc.1_5end
|association_with_transcript=0bp_to_ENSMUST00000059699,NM_001168624,NM_198614,uc007fzb.2,uc007fzc.1_5end
|cluster_id=chr10:79076757..79076800,-
|description=CAGE_peak_1_at_C2cd4c_5end
|description=CAGE_peak_1_at_C2cd4c_5end
|id=chr10:79076757..79076800,-
|id=chr10:79076757..79076800,-
|ontology_enrichment_celltype=CL:0000117!2.68e-12!23;CL:0000337!2.68e-12!23;CL:0000540!6.46e-10!33;CL:0000047!6.46e-10!33;CL:0000031!6.46e-10!33;CL:0000404!6.46e-10!33;CL:0000393!3.87e-08!39;CL:0000211!3.87e-08!39;CL:0000221!1.33e-07!44;CL:0000133!1.33e-07!44;CL:0002319!3.50e-07!43
|ontology_enrichment_celltype_v019_2=CL:0000117,1.27e-27,23;CL:0000337,1.27e-27,23;CL:0000540,6.51e-18,33;CL:0000047,6.51e-18,33;CL:0000031,6.51e-18,33;CL:0000404,6.51e-18,33;CL:0000393,1.74e-14,39;CL:0000211,1.74e-14,39;CL:0002319,9.71e-13,43;CL:0000221,2.36e-12,44;CL:0000133,2.36e-12,44;CL:0002613,1.72e-08,3;CL:0000120,1.92e-08,3;CL:0002612,2.66e-08,3;CL:0002614,5.06e-08,3;CL:0002610,2.52e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!5.23e-17!73;UBERON:0005743!5.23e-17!73;UBERON:0000073!2.43e-16!75;UBERON:0001016!2.43e-16!75;UBERON:0001049!6.27e-16!52;UBERON:0005068!6.27e-16!52;UBERON:0006241!6.27e-16!52;UBERON:0007135!6.27e-16!52;UBERON:0002616!8.73e-14!49;UBERON:0002346!2.09e-13!71;UBERON:0003075!2.09e-13!71;UBERON:0007284!2.09e-13!71;UBERON:0000955!3.76e-13!50;UBERON:0006238!3.76e-13!50;UBERON:0000033!4.32e-13!63;UBERON:0002020!2.68e-12!34;UBERON:0004121!5.99e-12!102;UBERON:0000924!5.99e-12!102;UBERON:0006601!5.99e-12!102;UBERON:0003080!1.10e-11!40;UBERON:0003056!1.35e-11!49;UBERON:0002780!4.22e-11!39;UBERON:0001890!4.22e-11!39;UBERON:0006240!4.22e-11!39;UBERON:0002791!6.55e-09!29;UBERON:0003528!6.55e-09!29;UBERON:0001893!6.55e-09!29;UBERON:0002420!6.49e-07!8;UBERON:0007245!6.49e-07!8;UBERON:0010009!6.49e-07!8;UBERON:0010011!6.49e-07!8;UBERON:0000454!6.49e-07!8
|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.04e-26,34;UBERON:0000073,1.80e-23,54;UBERON:0001017,1.68e-22,73;UBERON:0001016,1.04e-21,75;UBERON:0001049,2.30e-20,52;UBERON:0005068,2.30e-20,52;UBERON:0006241,2.30e-20,52;UBERON:0007135,2.30e-20,52;UBERON:0003528,5.30e-17,29;UBERON:0002791,5.30e-17,29;UBERON:0001893,5.30e-17,29;UBERON:0004121,1.22e-15,95;UBERON:0000924,1.22e-15,95;UBERON:0006601,1.22e-15,95;UBERON:0002346,1.94e-15,64;UBERON:0003075,1.94e-15,64;UBERON:0007284,1.94e-15,64;UBERON:0002420,1.11e-14,8;UBERON:0007245,1.11e-14,8;UBERON:0010009,1.11e-14,8;UBERON:0010011,1.11e-14,8;UBERON:0000454,1.11e-14,8;UBERON:0003080,1.64e-14,40;UBERON:0002240,3.91e-14,6;UBERON:0005174,3.91e-14,6;UBERON:0001137,3.91e-14,6;UBERON:0002780,3.09e-13,39;UBERON:0001890,3.09e-13,39;UBERON:0006240,3.09e-13,39;UBERON:0010371,8.19e-13,73;UBERON:0001948,1.38e-12,5;UBERON:0002315,1.38e-12,5;UBERON:0002616,4.75e-12,46;UBERON:0000955,1.06e-11,47;UBERON:0006238,1.06e-11,47;UBERON:0003056,4.76e-11,49;UBERON:0002950,7.97e-10,4;UBERON:0001891,7.97e-10,4;UBERON:0009616,7.97e-10,4;UBERON:0010286,7.97e-10,4;UBERON:0010314,5.53e-09,92;UBERON:0000369,2.09e-08,5;UBERON:0002435,2.09e-08,5;UBERON:0000204,2.09e-08,5;UBERON:0010082,2.09e-08,5;UBERON:0002257,2.66e-08,3;UBERON:0002038,5.06e-08,3;UBERON:0009663,5.06e-08,3;UBERON:0009661,5.06e-08,3;UBERON:0000125,5.06e-08,3;UBERON:0002308,5.06e-08,3;UBERON:0004684,2.52e-07,3;UBERON:0002275,2.52e-07,3;UBERON:0002021,2.85e-07,10;UBERON:0000411,2.85e-07,10;UBERON:0001950,2.85e-07,10;UBERON:0002619,5.10e-07,17;UBERON:0000956,6.28e-07,21;UBERON:0001869,6.28e-07,21;UBERON:0000203,6.28e-07,21
|phase1_expression=0.80074423552397,0,0,0.30246421130683,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.680346321208558,0,0,0.159992422793407,0.22940928106717,0,0,0.215471232685889,0.570070258369122,0.252030129759931,0.221730510655305,0,0,0,0,0.498703936075477,0.408338712524738,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.367093504323363,0.782391344348039,0,0,0,0.139986421625363,0,0,0,0,0,0,0,5.26022798234954,12.1667925232568,6.97214543856797,0,0,0,0,0,0,0.384218305321555,0.311068836925433,0.270011876663381,0,5.14171771926846,4.8591079009355,0.61245399607477,0.383381884072945,0,2.20231761998777,1.65993539510744,3.07213066512487,6.3305418110493,9.05727671663856,7.29278718779464,2.51264699101243,7.31591393041184,4.12555268997387,8.2496003932627,5.83723891276322,5.03278503728312,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0.845060518660083,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0.304465478312141,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0.628340120440365,0.255457055208591,0,0,0,1.79748767285787,0.457500602818626,3.01570445070875,2.25971616249959,0.255715457330331,1.45451631191692,0.486723789203273,0.203678727700633,0,0.252722758433675,0.420883711772948,0.130120442962704,0.689706313300419,0.360124259610698,0.150704817835715,0.136072998302656,0.12811372028485,0.187403449119458,0,0.215567992932842,0,0,0,0.278047249225598,0.348252166522167,0,0.796137067273973,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0.154267112887378,0,0,0,0,0,0,0,0,0,1.89260953707715,2.36680608472354,0,0,0,0.232236671860439,0.128867461322093,0.201683524623343,0,0,0.474529061544512,0.164698954724011,0.251335208800269,0,0,0,0.216138049874694,0,0.379335801906163,0.228497025219458,0,0,0.387904974335251,0.210407459670956,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0.169745085775188,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.586058432961016,0,0,0,0.390438744296638,0.646270193198397,0,0,0.566153061577665,0,0,0.395287777946524,0,0.283880170416537,0,0.325773918707152,0.164970122972535,0,1.21390318077491,1.209294227859,0.188605079755898,0.590603785761546,0.614870295887855,1.03371317267288,0,0.712994756769443,0,0,0,0.680879211507576,0.720244376125241,0.129358683782755,0.428674070063185,0.177340233642274,0.535106452806212,0.164549020602121,0.304464949114599,0,0,0,0,0,0.180938774784468,0,0,0.291480836629851,1.11255181206306,0,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0,0.216010681643603,0,0.218362563746178,0.134864346384821,0.165306911450672,0,0.129614973291793,0,1.69107881605257,0,0.165458490457098,0.388902376688095,0.387479470433193,0,0.352071715937262,0.651021924219751,0.838874755405687,0.483168241652012,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443971906748129,0,0,0.19318959403219,0,0,0,0,0,0.920650473014354,1.71868654031819,2.23409137046794,0.685082519770642,0,2.70009000092722,1.80128481289688,1.81256963593682,1.03552062350364,0.103787347584177,0.399024873401031,0.170733605754134,0.243106717068294,0.209613162627982,0.735374033800057,0.666740183404846,0.412070114477788,0.320919209591815,1.51618327058278,0.760437899670719,0.565879024158229,0.749132059759059,0.768301828858431,0.516919220600519,2.38146845641537,0.579421629724277,0.77163688185482,0.824171801606613,0.588795680537589,1.02860775715625,0.354951612318675,1.1921809497366,0.581385666529314,0.376437521661322,1.26921911837515,0.73171189149109,0.526139422875686,0.543216455383447,0.561142271657738,0.830445126869219,1.0835493061312,0.409231043169689,0.464810523557898,0.578719832943424,1.49886346762768,0.701794825336225,0.214871054048298,0,0,0
|phase1_expression=0.80074423552397,0,0,0.30246421130683,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.680346321208558,0,0,0.159992422793407,0.22940928106717,0,0,0.215471232685889,0.570070258369122,0.252030129759931,0.221730510655305,0,0,0,0,0.498703936075477,0.408338712524738,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.367093504323363,0.782391344348039,0,0,0,0.139986421625363,0,0,0,0,0,0,0,5.26022798234954,12.1667925232568,6.97214543856797,0,0,0,0,0,0,0.384218305321555,0.311068836925433,0.270011876663381,0,5.14171771926846,4.8591079009355,0.61245399607477,0.383381884072945,0,2.20231761998777,1.65993539510744,3.07213066512487,6.3305418110493,9.05727671663856,7.29278718779464,2.51264699101243,7.31591393041184,4.12555268997387,8.2496003932627,5.83723891276322,5.03278503728312,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0.845060518660083,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0.304465478312141,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0.628340120440365,0.255457055208591,0,0,0,1.79748767285787,0.457500602818626,3.01570445070875,2.25971616249959,0.255715457330331,1.45451631191692,0.486723789203273,0.203678727700633,0,0.252722758433675,0.420883711772948,0.130120442962704,0.689706313300419,0.360124259610698,0.150704817835715,0.136072998302656,0.12811372028485,0.187403449119458,0,0.215567992932842,0,0,0,0.278047249225598,0.348252166522167,0,0.796137067273973,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0.154267112887378,0,0,0,0,0,0,0,0,0,1.89260953707715,2.36680608472354,0,0,0,0.232236671860439,0.128867461322093,0.201683524623343,0,0,0.474529061544512,0.164698954724011,0.251335208800269,0,0,0,0.216138049874694,0,0.379335801906163,0.228497025219458,0,0,0.387904974335251,0.210407459670956,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0.169745085775188,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.586058432961016,0,0,0,0.390438744296638,0.646270193198397,0,0,0.566153061577665,0,0,0.395287777946524,0,0.283880170416537,0,0.325773918707152,0.164970122972535,0,1.21390318077491,1.209294227859,0.188605079755898,0.590603785761546,0.614870295887855,1.03371317267288,0,0.712994756769443,0,0,0,0.680879211507576,0.720244376125241,0.129358683782755,0.428674070063185,0.177340233642274,0.535106452806212,0.164549020602121,0.304464949114599,0,0,0,0,0,0.180938774784468,0,0,0.291480836629851,1.11255181206306,0,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0,0.216010681643603,0,0.218362563746178,0.134864346384821,0.165306911450672,0,0.129614973291793,0,1.69107881605257,0,0.165458490457098,0.388902376688095,0.387479470433193,0,0.352071715937262,0.651021924219751,0.838874755405687,0.483168241652012,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443971906748129,0,0,0.19318959403219,0,0,0,0,0,0.920650473014354,1.71868654031819,2.23409137046794,0.685082519770642,0,2.70009000092722,1.80128481289688,1.81256963593682,1.03552062350364,0.103787347584177,0.399024873401031,0.170733605754134,0.243106717068294,0.209613162627982,0.735374033800057,0.666740183404846,0.412070114477788,0.320919209591815,1.51618327058278,0.760437899670719,0.565879024158229,0.749132059759059,0.768301828858431,0.516919220600519,2.38146845641537,0.579421629724277,0.77163688185482,0.824171801606613,0.588795680537589,1.02860775715625,0.354951612318675,1.1921809497366,0.581385666529314,0.376437521661322,1.26921911837515,0.73171189149109,0.526139422875686,0.543216455383447,0.561142271657738,0.830445126869219,1.0835493061312,0.409231043169689,0.464810523557898,0.578719832943424,1.49886346762768,0.701794825336225,0.214871054048298,0,0,0
|short_description=p1@C2cd4c
|short_description=p1@C2cd4c
}}
}}

Latest revision as of 08:45, 26 September 2015

Short description:p1@C2cd4c
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_C2cd4c_5end
Coexpression cluster:MCL_coexpression_mm9:87
Association with transcript: 0bp_to_ENSMUST00000059699, NM_001168624, NM_198614, uc007fzb.2, uc007fzc.1_5end
EntrezGene:C2cd4c
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@C2cd4c

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C35.26
Mouse Granule cells, donor2.CNhs12357.11731-123E312.17
Mouse Granule cells, donor3.CNhs12108.11636-122C76.97
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.86
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.66
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.07
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.33
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F49.06
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.29
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.51
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.13
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D68.25
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.84
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.03
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.80
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F13.02
cortex, adult.CNhs10473.12-14D52.26
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F21.45
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.89
hippocampus, neonate N00.CNhs11228.627-43G12.37
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.59
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C91.11
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.84
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.23
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.52
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.08
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gray matter4.04e-2634
regional part of nervous system1.80e-2354
central nervous system1.68e-2273
nervous system1.04e-2175
neural tube2.30e-2052
neural rod2.30e-2052
future spinal cord2.30e-2052
neural keel2.30e-2052
brain grey matter5.30e-1729
regional part of telencephalon5.30e-1729
telencephalon5.30e-1729
ectoderm-derived structure1.22e-1595
ectoderm1.22e-1595
presumptive ectoderm1.22e-1595
neurectoderm1.94e-1564
neural plate1.94e-1564
presumptive neural plate1.94e-1564
basal ganglion1.11e-148
nuclear complex of neuraxis1.11e-148
aggregate regional part of brain1.11e-148
collection of basal ganglia1.11e-148
cerebral subcortex1.11e-148
anterior neural tube1.64e-1440
spinal cord3.91e-146
dorsal region element3.91e-146
dorsum3.91e-146
regional part of forebrain3.09e-1339
forebrain3.09e-1339
future forebrain3.09e-1339
ecto-epithelium8.19e-1373
regional part of spinal cord1.38e-125
gray matter of spinal cord1.38e-125
regional part of brain4.75e-1246
brain1.06e-1147
future brain1.06e-1147
pre-chordal neural plate4.76e-1149
regional part of midbrain7.97e-104
midbrain7.97e-104
presumptive midbrain7.97e-104
midbrain neural tube7.97e-104
structure with developmental contribution from neural crest5.53e-0992
corpus striatum2.09e-085
striatum2.09e-085
ventral part of telencephalon2.09e-085
future corpus striatum2.09e-085
ventral horn of spinal cord2.66e-083
substantia nigra5.06e-083
telencephalic nucleus5.06e-083
midbrain nucleus5.06e-083
neural nucleus5.06e-083
nucleus of brain5.06e-083
raphe nuclei2.52e-073
reticular formation2.52e-073
occipital lobe2.85e-0710
visual cortex2.85e-0710
neocortex2.85e-0710
regional part of cerebral cortex5.10e-0717
cerebral cortex6.28e-0721
cerebral hemisphere6.28e-0721
pallium6.28e-0721
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr10:79076757..79076800,-&oldid=4244080"