FFCP PHASE1:Mm9::chr10:59362400..59362427,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=320 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:59362400..59362427,- | |||
|description=CAGE_peak_at_chr10:59362400..59362427,- | |description=CAGE_peak_at_chr10:59362400..59362427,- | ||
|id=chr10:59362400..59362427,- | |id=chr10:59362400..59362427,- | ||
|ontology_enrichment_celltype=CL:0000034!9.06e-08!97;CL:0000723!9.76e-08!91;CL:0000048!9.76e-08!91;CL:0000988!1.02e-07!32;CL:0002032!1.02e-07!32;CL:0000037!1.02e-07!32;CL:0000566!1.02e-07!32;CL:0000837!1.02e-07!32;CL:0000144!3.07e-07!121;CL:0000012!3.07e-07!121;CL:0000838!5.01e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.13e-12,32;CL:0002032,1.13e-12,32;CL:0000037,1.13e-12,32;CL:0000837,1.13e-12,32;CL:0002031,4.34e-11,25;CL:0000838,1.26e-10,12;CL:0000034,5.20e-10,97;CL:0000542,1.45e-09,13;CL:0000051,1.45e-09,13;CL:0000084,2.16e-09,11;CL:0000827,2.16e-09,11;CL:0000723,9.32e-09,91;CL:0000048,9.32e-09,91;CL:0000791,1.44e-07,9;CL:0000789,1.44e-07,9;CL:0002420,1.44e-07,9;CL:0002419,1.44e-07,9;CL:0000790,1.44e-07,9;CL:0002320,1.47e-07,46;CL:0000134,1.47e-07,46;CL:0000624,7.37e-07,8 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007811!2.10e-08!86;UBERON:0000153!7.90e-08!94;UBERON:0001017!8.62e-07!73;UBERON:0005743!8.62e-07!73 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000072,2.39e-09,27;UBERON:0004177,2.42e-08,29;UBERON:0005057,2.42e-08,29;UBERON:0002193,4.90e-08,48;UBERON:0002405,4.90e-08,48;UBERON:0002390,5.02e-08,45;UBERON:0003061,5.02e-08,45;UBERON:0002370,9.79e-08,23;UBERON:0000974,9.79e-08,23;UBERON:0004807,9.79e-08,23;UBERON:0005058,9.79e-08,23;UBERON:0003351,9.79e-08,23;UBERON:0009113,9.79e-08,23;UBERON:0003295,9.79e-08,23;UBERON:0009722,9.79e-08,23;UBERON:0005562,9.79e-08,23;UBERON:0007690,9.79e-08,23;UBERON:0002384,1.47e-07,46;UBERON:0006562,3.02e-07,24;UBERON:0003408,3.02e-07,24;UBERON:0001557,3.02e-07,24;UBERON:0001042,3.02e-07,24;UBERON:0008814,3.02e-07,24;UBERON:0009145,3.02e-07,24 | |||
|phase1_expression=0,0.348975407639361,1.81999695755814,0.90739263392049,1.50268718983904,0.839396359559449,0.934450562382103,2.96983643915625,1.68946466582,3.5109678948299,1.19852577757853,0.638177271962691,2.73921167889929,3.75907730401689,0.666219523631325,2.42970320867791,0,7.5710919685977,8.91243818437302,5.51706547337439,0.510259740906419,2.48227378002213,2.35079810225042,0.95995453676044,0.45881856213434,0,0,0.215471232685889,0.760093677825496,0,0.221730510655305,5.08024538767705,3.07532393792285,0,0.288851619751275,0.332469290716985,0.612508068787107,3.34825304589526,2.3440060335714,2.61761871986899,3.52938892818609,3.41522742479223,1.45653105909346,0.755380907853464,1.01376931219515,1.83546752161682,0,0.872100625521786,0.659058548203415,0.972149495371417,0.139986421625363,1.43752564364972,13.0870432725034,2.90144856804538,1.68046899571232,0,0,0,1.61853168687678,1.05798195854407,1.90149421051854,0,0,0.449949858640699,0,0,0.898800331555214,0,0.311068836925433,0.675029691658453,0.210324961351382,0.856952953211411,0.220868540951614,0.734944795289724,0.670918297127655,1.83843757322004,2.20231761998777,0.383062014255563,0.614426133024974,0.791317726381163,1.09785172322892,1.04182674111352,0.837548997004143,3.37657566019008,0.916789486660861,0.294628585473668,0.427115042397309,0.745597783301202,0.075726193333184,0,0,0,0,0.539703191637817,0,0,0.561777680527007,1.1930122580464,0.519572009205738,0.70667914902068,0.14084341977668,0,0,0,1.5154372870785,3.04031838570118,2.02209778005913,0.22836775943812,2.58937883647172,0.29688427812965,0.867426633830679,0.913396434936424,0.230615497256059,0.753613202763113,0,0.376999773989026,0,0.289198713839823,3.5384422077995,0.161766849947409,0.220841518460394,0,0,0,0.83778682725382,0,3.23500836165985,2.99951365496704,2.03312363316904,1.04853447583376,2.28750301409313,0.753926112677186,1.39059456153821,0.767146371990992,1.66230435647648,1.1356888414743,0.101839363850316,0.622034853050465,1.26361379216837,0,0.260240885925407,0.919608417733892,0.720248519221397,1.35634336052144,0.748401490664606,1.15302348256365,0.749613796477831,0.517406741478031,0.431135985865684,0.378212160335639,0.175951124163949,0.219195732427575,0.278047249225598,0,0.61734640922383,0,2.80885274925294,0.772043721344145,0.568326998791185,0.414251545071004,0.234526059981096,0,0.23674473558521,0,0,0.697601834251224,0,0,0,0,0,0,0,0,0.630869845692382,0.308713837137853,0,0.264450566663544,0.213288250535234,0.232236671860439,0.257734922644187,0,0.444756087689741,0.570676878337677,0,0.164698954724011,0.251335208800269,0.198956472041151,0.38992817423824,0,0.216138049874694,0.199141273254367,0.189667900953082,0.342745537829186,0,0.203651327845314,0,0.0701358198903186,0.0632365371242573,0.147610147979602,0.31399745568275,0.246794327843601,0.296452627087149,0.333690211432188,0.196558995113203,0,0,0.241177159752417,0.50925170356284,0,0,0.274561413188081,0,0.744281895337007,0,0.252578877947112,0,0,0.554259570499814,0.37898282354097,0,0.339490171550376,0.234690248288502,0.670025029767263,0.952174563544055,0.390267295715598,0.630540576424764,0.221464689648775,0.797273843287435,1.47476983244164,0.518054945597687,0.433947175744535,0,0,0.491764273019036,0.275936746304732,1.12385412991454,0.937693492737625,0,0.252470927204373,0.94652465824877,1.17131623288992,1.29254038639679,0.477937595905104,0.891194696329576,0.283076530788832,1.21443210502468,1.46127928955656,0.790575555893047,1.28528526568723,0.283880170416537,0.178065603667255,0,0,0,0.242780636154981,0.604647113929502,0.754420319023592,3.2483208216885,2.15204603560749,0,0.727067458955011,0,0.316036757935816,1.05418608574999,1.03135543248187,3.40439605753788,0.720244376125241,0.776152102696527,0.643011105094777,0.177340233642274,0.178368817602071,0.658196082408484,2.13125464380219,0.469343416127421,0.21183207086382,0,0,0,0.482503399425247,0.358117032009409,0.164140899745061,0,1.29797711407357,2.39219233116994,0.206386867963223,0.740778109478847,0.376736914009382,1.23024804948923,3.20289442489132,6.4591803397665,3.91864066506242,2.76399947608848,0,0,0.406638934253697,0.108005340821801,0.418176592028937,0.218362563746178,0.539457385539283,0.165306911450672,0.26175594198403,0.259229946583586,0.621339313086926,0,0.598066184175915,0.330916980914195,0,0,0.337912250981556,0,0,0,0,0,2.21207784439725,0.202725215290164,0.616265742988964,0.909445760844565,2.14832034800978,1.98681354781265,1.44234539423963,1.62458479892035,1.9183625490148,1.295515713135,0.604957110821043,2.24153125701431,3.94468550725351,2.57129184799452,0,0,0,0,0.386379188064381,0,0.183151624267265,0.428736758158132,0,0,0,0,0.515559547031063,0.685082519770642,1.5107877947794,0.675022500231806,1.80128481289688,0.453142408984205,0.51776031175182,0.830298780673413,0.399024873401031,0.682934423016537,0.486213434136588,0.628839487883947,0.367687016900028,0,0.412070114477788,0,0.252697211763798,0.760437899670719,0,0.468207537349412,0.320125762024346,0.287177344778066,0.952587382566147,0.115884325944855,0.192909220463705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| |phase1_expression=0,0.348975407639361,1.81999695755814,0.90739263392049,1.50268718983904,0.839396359559449,0.934450562382103,2.96983643915625,1.68946466582,3.5109678948299,1.19852577757853,0.638177271962691,2.73921167889929,3.75907730401689,0.666219523631325,2.42970320867791,0,7.5710919685977,8.91243818437302,5.51706547337439,0.510259740906419,2.48227378002213,2.35079810225042,0.95995453676044,0.45881856213434,0,0,0.215471232685889,0.760093677825496,0,0.221730510655305,5.08024538767705,3.07532393792285,0,0.288851619751275,0.332469290716985,0.612508068787107,3.34825304589526,2.3440060335714,2.61761871986899,3.52938892818609,3.41522742479223,1.45653105909346,0.755380907853464,1.01376931219515,1.83546752161682,0,0.872100625521786,0.659058548203415,0.972149495371417,0.139986421625363,1.43752564364972,13.0870432725034,2.90144856804538,1.68046899571232,0,0,0,1.61853168687678,1.05798195854407,1.90149421051854,0,0,0.449949858640699,0,0,0.898800331555214,0,0.311068836925433,0.675029691658453,0.210324961351382,0.856952953211411,0.220868540951614,0.734944795289724,0.670918297127655,1.83843757322004,2.20231761998777,0.383062014255563,0.614426133024974,0.791317726381163,1.09785172322892,1.04182674111352,0.837548997004143,3.37657566019008,0.916789486660861,0.294628585473668,0.427115042397309,0.745597783301202,0.075726193333184,0,0,0,0,0.539703191637817,0,0,0.561777680527007,1.1930122580464,0.519572009205738,0.70667914902068,0.14084341977668,0,0,0,1.5154372870785,3.04031838570118,2.02209778005913,0.22836775943812,2.58937883647172,0.29688427812965,0.867426633830679,0.913396434936424,0.230615497256059,0.753613202763113,0,0.376999773989026,0,0.289198713839823,3.5384422077995,0.161766849947409,0.220841518460394,0,0,0,0.83778682725382,0,3.23500836165985,2.99951365496704,2.03312363316904,1.04853447583376,2.28750301409313,0.753926112677186,1.39059456153821,0.767146371990992,1.66230435647648,1.1356888414743,0.101839363850316,0.622034853050465,1.26361379216837,0,0.260240885925407,0.919608417733892,0.720248519221397,1.35634336052144,0.748401490664606,1.15302348256365,0.749613796477831,0.517406741478031,0.431135985865684,0.378212160335639,0.175951124163949,0.219195732427575,0.278047249225598,0,0.61734640922383,0,2.80885274925294,0.772043721344145,0.568326998791185,0.414251545071004,0.234526059981096,0,0.23674473558521,0,0,0.697601834251224,0,0,0,0,0,0,0,0,0.630869845692382,0.308713837137853,0,0.264450566663544,0.213288250535234,0.232236671860439,0.257734922644187,0,0.444756087689741,0.570676878337677,0,0.164698954724011,0.251335208800269,0.198956472041151,0.38992817423824,0,0.216138049874694,0.199141273254367,0.189667900953082,0.342745537829186,0,0.203651327845314,0,0.0701358198903186,0.0632365371242573,0.147610147979602,0.31399745568275,0.246794327843601,0.296452627087149,0.333690211432188,0.196558995113203,0,0,0.241177159752417,0.50925170356284,0,0,0.274561413188081,0,0.744281895337007,0,0.252578877947112,0,0,0.554259570499814,0.37898282354097,0,0.339490171550376,0.234690248288502,0.670025029767263,0.952174563544055,0.390267295715598,0.630540576424764,0.221464689648775,0.797273843287435,1.47476983244164,0.518054945597687,0.433947175744535,0,0,0.491764273019036,0.275936746304732,1.12385412991454,0.937693492737625,0,0.252470927204373,0.94652465824877,1.17131623288992,1.29254038639679,0.477937595905104,0.891194696329576,0.283076530788832,1.21443210502468,1.46127928955656,0.790575555893047,1.28528526568723,0.283880170416537,0.178065603667255,0,0,0,0.242780636154981,0.604647113929502,0.754420319023592,3.2483208216885,2.15204603560749,0,0.727067458955011,0,0.316036757935816,1.05418608574999,1.03135543248187,3.40439605753788,0.720244376125241,0.776152102696527,0.643011105094777,0.177340233642274,0.178368817602071,0.658196082408484,2.13125464380219,0.469343416127421,0.21183207086382,0,0,0,0.482503399425247,0.358117032009409,0.164140899745061,0,1.29797711407357,2.39219233116994,0.206386867963223,0.740778109478847,0.376736914009382,1.23024804948923,3.20289442489132,6.4591803397665,3.91864066506242,2.76399947608848,0,0,0.406638934253697,0.108005340821801,0.418176592028937,0.218362563746178,0.539457385539283,0.165306911450672,0.26175594198403,0.259229946583586,0.621339313086926,0,0.598066184175915,0.330916980914195,0,0,0.337912250981556,0,0,0,0,0,2.21207784439725,0.202725215290164,0.616265742988964,0.909445760844565,2.14832034800978,1.98681354781265,1.44234539423963,1.62458479892035,1.9183625490148,1.295515713135,0.604957110821043,2.24153125701431,3.94468550725351,2.57129184799452,0,0,0,0,0.386379188064381,0,0.183151624267265,0.428736758158132,0,0,0,0,0.515559547031063,0.685082519770642,1.5107877947794,0.675022500231806,1.80128481289688,0.453142408984205,0.51776031175182,0.830298780673413,0.399024873401031,0.682934423016537,0.486213434136588,0.628839487883947,0.367687016900028,0,0.412070114477788,0,0.252697211763798,0.760437899670719,0,0.468207537349412,0.320125762024346,0.287177344778066,0.952587382566147,0.115884325944855,0.192909220463705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| ||
|short_description=p@chr10:59362400..59362427,- | |short_description=p@chr10:59362400..59362427,- | ||
}} | }} |
Latest revision as of 12:21, 4 August 2015
Short description: | p@chr10:59362400..59362427, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:59362400..59362427, - |
Coexpression cluster: | MCL_coexpression_mm9:320 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.13e-12 | 32 |
hematopoietic oligopotent progenitor cell | 1.13e-12 | 32 |
hematopoietic stem cell | 1.13e-12 | 32 |
hematopoietic multipotent progenitor cell | 1.13e-12 | 32 |
hematopoietic lineage restricted progenitor cell | 4.34e-11 | 25 |
lymphoid lineage restricted progenitor cell | 1.26e-10 | 12 |
stem cell | 5.20e-10 | 97 |
lymphocyte | 1.45e-09 | 13 |
common lymphoid progenitor | 1.45e-09 | 13 |
T cell | 2.16e-09 | 11 |
pro-T cell | 2.16e-09 | 11 |
somatic stem cell | 9.32e-09 | 91 |
multi fate stem cell | 9.32e-09 | 91 |
mature alpha-beta T cell | 1.44e-07 | 9 |
alpha-beta T cell | 1.44e-07 | 9 |
immature T cell | 1.44e-07 | 9 |
mature T cell | 1.44e-07 | 9 |
immature alpha-beta T cell | 1.44e-07 | 9 |
connective tissue cell | 1.47e-07 | 46 |
mesenchymal cell | 1.47e-07 | 46 |
CD4-positive, alpha-beta T cell | 7.37e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
segment of respiratory tract | 2.39e-09 | 27 |
hemopoietic organ | 2.42e-08 | 29 |
immune organ | 2.42e-08 | 29 |
hemolymphoid system | 4.90e-08 | 48 |
immune system | 4.90e-08 | 48 |
hematopoietic system | 5.02e-08 | 45 |
blood island | 5.02e-08 | 45 |
thymus | 9.79e-08 | 23 |
neck | 9.79e-08 | 23 |
respiratory system epithelium | 9.79e-08 | 23 |
hemolymphoid system gland | 9.79e-08 | 23 |
pharyngeal epithelium | 9.79e-08 | 23 |
thymic region | 9.79e-08 | 23 |
pharyngeal gland | 9.79e-08 | 23 |
entire pharyngeal arch endoderm | 9.79e-08 | 23 |
thymus primordium | 9.79e-08 | 23 |
early pharyngeal endoderm | 9.79e-08 | 23 |
connective tissue | 1.47e-07 | 46 |
pharynx | 3.02e-07 | 24 |
gland of gut | 3.02e-07 | 24 |
upper respiratory tract | 3.02e-07 | 24 |
chordate pharynx | 3.02e-07 | 24 |
pharyngeal arch system | 3.02e-07 | 24 |
pharyngeal region of foregut | 3.02e-07 | 24 |