FFCP PHASE1:Mm9::chr10:18038403..18038428,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:18038403..18038428,+ | |||
|description=CAGE_peak_at_chr10:18038403..18038428,+ | |description=CAGE_peak_at_chr10:18038403..18038428,+ | ||
|id=chr10:18038403..18038428,+ | |id=chr10:18038403..18038428,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,6.22e-08,3;CL:0000351,6.22e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!5.03e-08!333;UBERON:0000922!1.75e-07!328 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,3.46e-15,22;UBERON:0000014,2.60e-12,5;UBERON:0001003,2.60e-12,5;UBERON:0002097,2.60e-12,5;UBERON:0002199,2.60e-12,5;UBERON:0007029,2.60e-12,5;UBERON:0007376,2.60e-12,5;UBERON:0002416,2.60e-12,5;UBERON:0007383,2.60e-12,5;UBERON:0000358,6.22e-08,3;UBERON:0000307,6.22e-08,3;UBERON:0007010,6.22e-08,3;UBERON:0000161,1.38e-07,5 | |||
|phase1_expression=0.80074423552397,0.348975407639361,0,0,0,0.671517087647559,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0.159992422793407,0,0,0,0,0,0.504060259519861,0,0,0,0,0.288851619751275,1.16364251750945,1.42918549383658,0,0,0,0,0,0,0.251793635951155,0,0,0,0.436050312760893,1.09843091367236,0.777719596297134,0.419959264876088,0,0,0,0.336093799142464,0,0,0,0,0,0,1.0165335962074,0,0,0,0,0.299600110518405,0.384218305321555,0,0.405017814995072,0,0.571301968807607,0.220868540951614,0,0.191690942036473,0,0,0.127687338085188,0.307213066512487,0.395658863190582,0.0914876436024097,0.52091337055676,0,0,0.61119299110724,0.589257170947335,0.569486723196412,0.186399445825301,0.530083353332288,0.604572480854284,0,0.860423876981386,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0.649473123033642,0.506719730950197,0.505524445014783,0.11418387971906,0.258937883647172,0.148442139064825,0.520455980298408,0.304465478312141,0,0,0.352766121407114,0,2.22475470960936,0,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0.41889341362691,0.766371165625774,0,0,0.127070227073065,0.748953197024114,0.457500602818626,0,0,0.511430914660661,0.20778804455956,0.486723789203273,0.203678727700633,0.497627882440372,0,0.841767423545896,0.650602214813519,0.689706313300419,0.720248519221397,1.20563854268572,0.884474488967262,0.384341160854549,0.843315521037559,0.517406741478031,1.07783996466421,0.567318240503458,0.527853372491847,0.657587197282725,1.39023624612799,1.39300866608867,1.64625709126355,0.796137067273973,0,0,0,0.621377317606506,0.469052119962192,0.720248245844059,0.473489471170421,0,0,0.465067889500816,0,0.233530684734339,0,0,0.648550476366846,0.146199987425332,0,0.268412837520744,0.841159794256509,0.102904612379284,0.330418782983798,0.264450566663544,0.639864751605702,1.16118335930219,0.38660238396628,0.403367049246685,0.22237804384487,0.570676878337677,0.474529061544512,0.494096864172033,0.251335208800269,0.198956472041151,0.58489226135736,0,0,0.597423819763102,0.758671603812327,0.571242563048644,2.25415471346161,1.01825663922657,0.581857461502877,1.1221731182451,0.758838445491087,0.147610147979602,0.784993639206874,0.740382983530803,0.889357881261447,0.333690211432188,0.393117990226406,0.449724224769707,0.608580364165509,0.241177159752417,0.25462585178142,0.863088412352432,0.810676133875177,0.274561413188081,0,0.372140947668503,0.624075346229121,1.01031551178845,0.179397413521912,1.4473305640901,0.554259570499814,0.189491411770485,0.162964976442026,0.509235257325564,1.64283173801951,0.502518772325447,0.476087281772027,0.390267295715598,0.157635144106191,0.44292937929755,0.478364305972461,0.655453258862952,0.518054945597687,0.289298117163023,0,0,0,0.551873492609465,0.321101179975584,0.937693492737625,0,0.252470927204373,0.315508219416257,0.390438744296638,0.215423397732799,0,0,0.566153061577665,0.404810701674894,0.584511715822624,0,0,0.141940085208269,0.35613120733451,0.488660878060728,0.824850614862677,2.65490276679926,0.971122544619926,0.604647113929502,0.754420319023592,0.590603785761546,0.614870295887855,0,0,1.06949213515416,0,1.05418608574999,0,0,0.900305470156551,0.776152102696527,0.214337035031592,0.709360934569094,0.535106452806212,0.329098041204242,0.304464949114599,0.23467170806371,1.0591603543191,0,1.48397627647332,1.45317984026315,1.93001359770099,2.50681922406587,2.62625439592098,0.291480836629851,0.370850604021019,0,0,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0.949007980743406,1.21991680276109,1.40406943068342,0.627264888043406,0.436725127492355,1.21377911746339,1.40510874733071,0.785267825952089,0.648074866458964,1.24267862617385,0,0.299033092087958,0.496375471371293,0.388902376688095,0.258319646955462,0.844780627453891,0.234714477291508,0.651021924219751,1.04859344425711,0.241584120826006,0,0,1.01362607645082,1.02710957164827,0.389762468933385,0.716106782669926,0,0.240390899039938,0.147689527174577,0.302899349844443,0.304827226619999,0.403304740547362,0.0974578807397524,0.192423683280659,0,1.13365191807606,1.33191572024439,5.38283139656854,1.67884616364078,1.54551675225752,0.563047426353546,0.36630324853453,3.00115730710692,0,1.12950368523413,0,0,0.515559547031063,0,0,0,0,0.453142408984205,0.51776031175182,0.726511433089237,1.59609949360412,0.341467211508268,0.729320151204882,0.419226325255965,0.367687016900028,0.222246727801615,0.412070114477788,0,0.758091635291392,0.50695859978048,0,0.37456602987953,0.640251524048693,0.287177344778066,0,0.579421629724277,0.38581844092741,0,0.147198920134397,0.342869252385415,0.177475806159338,0.715308569841963,0.436039249896986,0.282328141245992,0.761531471025089,0.548783918618318,0.263069711437843,0.543216455383447,0.561142271657738,0.355905054372522,0.689531376628944,0,0.619747364743864,0.385813221962283,0.249810577937946,0.467863216890817,0.859484216193193,0.191288332068843,0,0 | |phase1_expression=0.80074423552397,0.348975407639361,0,0,0,0.671517087647559,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0.159992422793407,0,0,0,0,0,0.504060259519861,0,0,0,0,0.288851619751275,1.16364251750945,1.42918549383658,0,0,0,0,0,0,0.251793635951155,0,0,0,0.436050312760893,1.09843091367236,0.777719596297134,0.419959264876088,0,0,0,0.336093799142464,0,0,0,0,0,0,1.0165335962074,0,0,0,0,0.299600110518405,0.384218305321555,0,0.405017814995072,0,0.571301968807607,0.220868540951614,0,0.191690942036473,0,0,0.127687338085188,0.307213066512487,0.395658863190582,0.0914876436024097,0.52091337055676,0,0,0.61119299110724,0.589257170947335,0.569486723196412,0.186399445825301,0.530083353332288,0.604572480854284,0,0.860423876981386,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0.649473123033642,0.506719730950197,0.505524445014783,0.11418387971906,0.258937883647172,0.148442139064825,0.520455980298408,0.304465478312141,0,0,0.352766121407114,0,2.22475470960936,0,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0.41889341362691,0.766371165625774,0,0,0.127070227073065,0.748953197024114,0.457500602818626,0,0,0.511430914660661,0.20778804455956,0.486723789203273,0.203678727700633,0.497627882440372,0,0.841767423545896,0.650602214813519,0.689706313300419,0.720248519221397,1.20563854268572,0.884474488967262,0.384341160854549,0.843315521037559,0.517406741478031,1.07783996466421,0.567318240503458,0.527853372491847,0.657587197282725,1.39023624612799,1.39300866608867,1.64625709126355,0.796137067273973,0,0,0,0.621377317606506,0.469052119962192,0.720248245844059,0.473489471170421,0,0,0.465067889500816,0,0.233530684734339,0,0,0.648550476366846,0.146199987425332,0,0.268412837520744,0.841159794256509,0.102904612379284,0.330418782983798,0.264450566663544,0.639864751605702,1.16118335930219,0.38660238396628,0.403367049246685,0.22237804384487,0.570676878337677,0.474529061544512,0.494096864172033,0.251335208800269,0.198956472041151,0.58489226135736,0,0,0.597423819763102,0.758671603812327,0.571242563048644,2.25415471346161,1.01825663922657,0.581857461502877,1.1221731182451,0.758838445491087,0.147610147979602,0.784993639206874,0.740382983530803,0.889357881261447,0.333690211432188,0.393117990226406,0.449724224769707,0.608580364165509,0.241177159752417,0.25462585178142,0.863088412352432,0.810676133875177,0.274561413188081,0,0.372140947668503,0.624075346229121,1.01031551178845,0.179397413521912,1.4473305640901,0.554259570499814,0.189491411770485,0.162964976442026,0.509235257325564,1.64283173801951,0.502518772325447,0.476087281772027,0.390267295715598,0.157635144106191,0.44292937929755,0.478364305972461,0.655453258862952,0.518054945597687,0.289298117163023,0,0,0,0.551873492609465,0.321101179975584,0.937693492737625,0,0.252470927204373,0.315508219416257,0.390438744296638,0.215423397732799,0,0,0.566153061577665,0.404810701674894,0.584511715822624,0,0,0.141940085208269,0.35613120733451,0.488660878060728,0.824850614862677,2.65490276679926,0.971122544619926,0.604647113929502,0.754420319023592,0.590603785761546,0.614870295887855,0,0,1.06949213515416,0,1.05418608574999,0,0,0.900305470156551,0.776152102696527,0.214337035031592,0.709360934569094,0.535106452806212,0.329098041204242,0.304464949114599,0.23467170806371,1.0591603543191,0,1.48397627647332,1.45317984026315,1.93001359770099,2.50681922406587,2.62625439592098,0.291480836629851,0.370850604021019,0,0,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0.949007980743406,1.21991680276109,1.40406943068342,0.627264888043406,0.436725127492355,1.21377911746339,1.40510874733071,0.785267825952089,0.648074866458964,1.24267862617385,0,0.299033092087958,0.496375471371293,0.388902376688095,0.258319646955462,0.844780627453891,0.234714477291508,0.651021924219751,1.04859344425711,0.241584120826006,0,0,1.01362607645082,1.02710957164827,0.389762468933385,0.716106782669926,0,0.240390899039938,0.147689527174577,0.302899349844443,0.304827226619999,0.403304740547362,0.0974578807397524,0.192423683280659,0,1.13365191807606,1.33191572024439,5.38283139656854,1.67884616364078,1.54551675225752,0.563047426353546,0.36630324853453,3.00115730710692,0,1.12950368523413,0,0,0.515559547031063,0,0,0,0,0.453142408984205,0.51776031175182,0.726511433089237,1.59609949360412,0.341467211508268,0.729320151204882,0.419226325255965,0.367687016900028,0.222246727801615,0.412070114477788,0,0.758091635291392,0.50695859978048,0,0.37456602987953,0.640251524048693,0.287177344778066,0,0.579421629724277,0.38581844092741,0,0.147198920134397,0.342869252385415,0.177475806159338,0.715308569841963,0.436039249896986,0.282328141245992,0.761531471025089,0.548783918618318,0.263069711437843,0.543216455383447,0.561142271657738,0.355905054372522,0.689531376628944,0,0.619747364743864,0.385813221962283,0.249810577937946,0.467863216890817,0.859484216193193,0.191288332068843,0,0 | ||
|short_description=p@chr10:18038403..18038428,+ | |short_description=p@chr10:18038403..18038428,+ | ||
}} | }} |
Latest revision as of 04:26, 4 August 2015
Short description: | p@chr10:18038403..18038428, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:18038403..18038428, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 6.22e-08 | 3 |
trophoblast cell | 6.22e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
surface structure | 3.46e-15 | 22 |
zone of skin | 2.60e-12 | 5 |
skin epidermis | 2.60e-12 | 5 |
skin of body | 2.60e-12 | 5 |
integument | 2.60e-12 | 5 |
surface | 2.60e-12 | 5 |
outer epithelium | 2.60e-12 | 5 |
integumental system | 2.60e-12 | 5 |
enveloping layer of ectoderm | 2.60e-12 | 5 |
blastocyst | 6.22e-08 | 3 |
blastula | 6.22e-08 | 3 |
cleaving embryo | 6.22e-08 | 3 |
orifice | 1.38e-07 | 5 |