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FFCP PHASE1:Mm9::chr8:108861887..108861896,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr8:108861887..108861896,-
|DHSsupport=NA
|short_description=p6@Smpd3
|DPIdataset=NA
|description=CAGE_peak_6_at_Smpd3_5end
|association_with_transcript=0bp_to_NM_021491,uc009nfy.1,uc009nfz.1_5end
|EntrezGene=58994
|EntrezGene=58994
|HGNC=
|HGNC=
|MCL_coexpression_id=22
|TSSclassifier=NA
|UniProt=Q9JJY3
|UniProt=Q9JJY3
|association_with_transcript=0bp_to_NM_021491,uc009nfy.1,uc009nfz.1_5end
|cluster_id=chr8:108861887..108861896,-
|description=CAGE_peak_6_at_Smpd3_5end
|id=chr8:108861887..108861896,-
|ontology_enrichment_celltype=CL:0000540!4.60e-19!33;CL:0000047!4.60e-19!33;CL:0000031!4.60e-19!33;CL:0000404!4.60e-19!33;CL:0002319!5.76e-17!43;CL:0000117!2.48e-16!23;CL:0000337!2.48e-16!23;CL:0000221!3.88e-16!44;CL:0000133!3.88e-16!44;CL:0000393!1.66e-14!39;CL:0000211!1.66e-14!39;CL:0000055!7.77e-13!50
|ontology_enrichment_celltype_v019_2=CL:0000540,3.19e-28,33;CL:0000047,3.19e-28,33;CL:0000031,3.19e-28,33;CL:0000404,3.19e-28,33;CL:0000117,7.45e-28,23;CL:0000337,7.45e-28,23;CL:0000393,1.71e-22,39;CL:0000211,1.71e-22,39;CL:0002319,3.79e-21,43;CL:0000221,1.85e-20,44;CL:0000133,1.85e-20,44;CL:0002609,5.56e-10,6;CL:0002321,1.16e-09,70
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.04e-33!73;UBERON:0005743!1.04e-33!73;UBERON:0000073!1.44e-32!75;UBERON:0001016!1.44e-32!75;UBERON:0004121!4.56e-30!102;UBERON:0000924!4.56e-30!102;UBERON:0006601!4.56e-30!102;UBERON:0002346!9.37e-28!71;UBERON:0003075!9.37e-28!71;UBERON:0007284!9.37e-28!71;UBERON:0001049!7.73e-25!52;UBERON:0005068!7.73e-25!52;UBERON:0006241!7.73e-25!52;UBERON:0007135!7.73e-25!52;UBERON:0000955!3.00e-23!50;UBERON:0006238!3.00e-23!50;UBERON:0000033!3.52e-23!63;UBERON:0003056!7.42e-23!49;UBERON:0002616!1.31e-22!49;UBERON:0003080!2.30e-20!40;UBERON:0002780!5.33e-20!39;UBERON:0001890!5.33e-20!39;UBERON:0006240!5.33e-20!39;UBERON:0002020!7.29e-20!34;UBERON:0002791!2.48e-16!29;UBERON:0003528!2.48e-16!29;UBERON:0001893!2.48e-16!29;UBERON:0007811!4.23e-12!86;UBERON:0000956!1.70e-11!21;UBERON:0001869!1.70e-11!21;UBERON:0000203!1.70e-11!21;UBERON:0000153!1.44e-09!94;UBERON:0002619!9.46e-09!17
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.91e-38,73;UBERON:0001016,7.47e-37,75;UBERON:0000073,3.92e-32,54;UBERON:0004121,1.46e-31,95;UBERON:0000924,1.46e-31,95;UBERON:0006601,1.46e-31,95;UBERON:0002020,2.10e-31,34;UBERON:0002346,1.04e-29,64;UBERON:0003075,1.04e-29,64;UBERON:0007284,1.04e-29,64;UBERON:0001049,3.23e-28,52;UBERON:0005068,3.23e-28,52;UBERON:0006241,3.23e-28,52;UBERON:0007135,3.23e-28,52;UBERON:0002780,1.01e-26,39;UBERON:0001890,1.01e-26,39;UBERON:0006240,1.01e-26,39;UBERON:0003080,8.16e-26,40;UBERON:0003056,1.40e-25,49;UBERON:0003528,7.23e-25,29;UBERON:0002791,7.23e-25,29;UBERON:0001893,7.23e-25,29;UBERON:0010371,1.77e-24,73;UBERON:0000955,5.40e-24,47;UBERON:0006238,5.40e-24,47;UBERON:0002616,5.98e-23,46;UBERON:0000956,2.35e-17,21;UBERON:0001869,2.35e-17,21;UBERON:0000203,2.35e-17,21;UBERON:0010314,7.43e-17,92;UBERON:0002619,2.35e-12,17;UBERON:0002420,1.30e-08,8;UBERON:0007245,1.30e-08,8;UBERON:0010009,1.30e-08,8;UBERON:0010011,1.30e-08,8;UBERON:0000454,1.30e-08,8;UBERON:0000369,1.55e-08,5;UBERON:0002435,1.55e-08,5;UBERON:0000204,1.55e-08,5;UBERON:0010082,1.55e-08,5;UBERON:0002021,6.72e-08,10;UBERON:0000411,6.72e-08,10;UBERON:0001950,6.72e-08,10;UBERON:0001948,8.89e-08,5;UBERON:0002315,8.89e-08,5;UBERON:0000025,3.68e-07,114
|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0.157731082679119,0.274228867211478,0,0.255129870453209,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0.872100625521786,0.219686182734472,0.388859798148567,0.55994568650145,1.43752564364972,0,0,0,0,0.573066879877513,0,4.85559506063035,4.7609188134483,10.1413024560989,0,0,0,0,0.7104801149461,0,0.384218305321555,4.35496371695606,5.67024940993101,5.04779907243317,2.85650984403804,3.09215957332259,7.10446635446733,7.18841032636773,11.0306254393203,2.20231761998777,1.53224805702225,1.38245879930619,8.30883612700221,6.77008562657831,5.73004707612436,1.11673199600552,0.56276261003168,1.5279824777681,3.83017161115768,3.98640706237488,5.03278503728312,0.151452386666368,0,0,0,0,0,0,0,0,0,0.259786004602869,0,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.173485326766136,0,0.230615497256059,0.301445281105245,0.23517741427141,0.125666591329675,0.247194967734374,0.144599356919912,0,0.323533699894818,0.220841518460394,0.484875253135222,0,2.34224637609238,0.209446706813455,0,0,0,0,0.898743836428936,3.20250421973039,7.413606774659,3.12883776346098,2.55715457330331,1.0389402227978,2.75810147215188,0.101839363850316,0,0,0.420883711772948,0.390361328888111,0.229902104433473,1.44049703844279,1.20563854268572,1.36072998302656,1.7935920839879,0.562210347358373,0.258703370739016,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0.329119699826961,0.164167464079095,0.0810688095458557,0,0.219550115291051,0,4.20579897128254,5.24813523134351,0,0.264450566663544,0,0,0.38660238396628,0.403367049246685,0,0.570676878337677,0,0,0,0,0,0,0.216138049874694,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0.642202359951168,0.820481806145422,0.163934945376675,0.252470927204373,1.57754109708128,1.17131623288992,0.861693590931196,0.477937595905104,0.222798674082394,1.13230612315533,1.21443210502468,1.46127928955656,1.58115111178609,1.92792789853084,0,0,0.162886959353576,0.329940245945071,0,0.242780636154981,0,0,0,0.307435147943927,0.775284879504663,0,0,0.316036757935816,0,0,2.38307724027652,0.36012218806262,0.258717367565509,0.643011105094777,1.06404140185364,1.60531935841864,0.658196082408484,1.522324745573,0,0,0.220528398054962,0.32977250588296,0.161464426695906,0.0603129249281559,0,0.164140899745061,0,0.741701208042039,0,0,0.185194527369712,0,0.136694227721025,0,0,0,0,0,0,0,0.324016022465404,0,0,0.404593039154462,0.0826534557253359,0,0,0,0,0,0,0.194451188344048,0,0.168956125490778,0.117357238645754,0,0.419437377702843,0.483168241652012,0.864090018773596,0,0,0,0.129920822977795,0,0,0,0.147689527174577,0,0,0.100826185136841,0,0.0962118416403295,0.233753804363138,0,0,0,0,0,0,0,0.214368379079066,0,2.82375921308533,1.84130094602871,1.71868654031819,3.26521046453006,4.7955776383945,2.2661816921691,0.675022500231806,1.35096360967266,0,2.5888015587591,0.103787347584177,0.399024873401031,1.02440163452481,0.486213434136588,1.04806581313991,0.735374033800057,1.55572709461131,0.618105171716683,1.28367683836726,1.01078884705519,1.01391719956096,0.754505365544305,0.655490552289177,0.704276676453562,1.26358031702349,0.476293691283074,0.579421629724277,0.77163688185482,0.412085900803307,0.441596760403192,1.37147700954166,1.77475806159337,0.715308569841963,1.16277133305863,0.752875043322645,1.01537529470012,1.09756783723664,1.05227884575137,0.950628796921032,0.561142271657738,1.18635018124174,0.591026894253381,0.409231043169689,0.929621047115796,0.578719832943424,1.99848462350357,1.16965804222704,0.429742108096597,0.382576664137687,0.441182838239031,0.695603506861264
|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0.157731082679119,0.274228867211478,0,0.255129870453209,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0.872100625521786,0.219686182734472,0.388859798148567,0.55994568650145,1.43752564364972,0,0,0,0,0.573066879877513,0,4.85559506063035,4.7609188134483,10.1413024560989,0,0,0,0,0.7104801149461,0,0.384218305321555,4.35496371695606,5.67024940993101,5.04779907243317,2.85650984403804,3.09215957332259,7.10446635446733,7.18841032636773,11.0306254393203,2.20231761998777,1.53224805702225,1.38245879930619,8.30883612700221,6.77008562657831,5.73004707612436,1.11673199600552,0.56276261003168,1.5279824777681,3.83017161115768,3.98640706237488,5.03278503728312,0.151452386666368,0,0,0,0,0,0,0,0,0,0.259786004602869,0,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.173485326766136,0,0.230615497256059,0.301445281105245,0.23517741427141,0.125666591329675,0.247194967734374,0.144599356919912,0,0.323533699894818,0.220841518460394,0.484875253135222,0,2.34224637609238,0.209446706813455,0,0,0,0,0.898743836428936,3.20250421973039,7.413606774659,3.12883776346098,2.55715457330331,1.0389402227978,2.75810147215188,0.101839363850316,0,0,0.420883711772948,0.390361328888111,0.229902104433473,1.44049703844279,1.20563854268572,1.36072998302656,1.7935920839879,0.562210347358373,0.258703370739016,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0.329119699826961,0.164167464079095,0.0810688095458557,0,0.219550115291051,0,4.20579897128254,5.24813523134351,0,0.264450566663544,0,0,0.38660238396628,0.403367049246685,0,0.570676878337677,0,0,0,0,0,0,0.216138049874694,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0.642202359951168,0.820481806145422,0.163934945376675,0.252470927204373,1.57754109708128,1.17131623288992,0.861693590931196,0.477937595905104,0.222798674082394,1.13230612315533,1.21443210502468,1.46127928955656,1.58115111178609,1.92792789853084,0,0,0.162886959353576,0.329940245945071,0,0.242780636154981,0,0,0,0.307435147943927,0.775284879504663,0,0,0.316036757935816,0,0,2.38307724027652,0.36012218806262,0.258717367565509,0.643011105094777,1.06404140185364,1.60531935841864,0.658196082408484,1.522324745573,0,0,0.220528398054962,0.32977250588296,0.161464426695906,0.0603129249281559,0,0.164140899745061,0,0.741701208042039,0,0,0.185194527369712,0,0.136694227721025,0,0,0,0,0,0,0,0.324016022465404,0,0,0.404593039154462,0.0826534557253359,0,0,0,0,0,0,0.194451188344048,0,0.168956125490778,0.117357238645754,0,0.419437377702843,0.483168241652012,0.864090018773596,0,0,0,0.129920822977795,0,0,0,0.147689527174577,0,0,0.100826185136841,0,0.0962118416403295,0.233753804363138,0,0,0,0,0,0,0,0.214368379079066,0,2.82375921308533,1.84130094602871,1.71868654031819,3.26521046453006,4.7955776383945,2.2661816921691,0.675022500231806,1.35096360967266,0,2.5888015587591,0.103787347584177,0.399024873401031,1.02440163452481,0.486213434136588,1.04806581313991,0.735374033800057,1.55572709461131,0.618105171716683,1.28367683836726,1.01078884705519,1.01391719956096,0.754505365544305,0.655490552289177,0.704276676453562,1.26358031702349,0.476293691283074,0.579421629724277,0.77163688185482,0.412085900803307,0.441596760403192,1.37147700954166,1.77475806159337,0.715308569841963,1.16277133305863,0.752875043322645,1.01537529470012,1.09756783723664,1.05227884575137,0.950628796921032,0.561142271657738,1.18635018124174,0.591026894253381,0.409231043169689,0.929621047115796,0.578719832943424,1.99848462350357,1.16965804222704,0.429742108096597,0.382576664137687,0.441182838239031,0.695603506861264
|short_description=p6@Smpd3
}}
}}

Latest revision as of 08:42, 27 September 2015

Short description:p6@Smpd3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Smpd3_5end
Coexpression cluster:MCL_coexpression_mm9:22
Association with transcript: 0bp_to_NM_021491, uc009nfy.1, uc009nfz.1_5end
EntrezGene:Smpd3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Smpd3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C34.86
Mouse Granule cells, donor2.CNhs12357.11731-123E34.76
Mouse Granule cells, donor3.CNhs12108.11636-122C710.14
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.35
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.67
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.09
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D27.10
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F27.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.03
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.53
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.31
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.77
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.73
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.53
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.83
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.03
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.34
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.90
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F17.41
cortex, adult.CNhs10473.12-14D53.13
cortex, neonate N30.CNhs11107.1392-42F22.56
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B22.76
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C91.44
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C61.36
eyeball, neonate N01.CNhs11140.1532-43E71.79
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E84.21
hippocampus, neonate N00.CNhs11228.627-43G15.25
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A30.82
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F61.61
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.74
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.27
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system2.91e-3873
nervous system7.47e-3775
regional part of nervous system3.92e-3254
ectoderm-derived structure1.46e-3195
ectoderm1.46e-3195
presumptive ectoderm1.46e-3195
gray matter2.10e-3134
neurectoderm1.04e-2964
neural plate1.04e-2964
presumptive neural plate1.04e-2964
neural tube3.23e-2852
neural rod3.23e-2852
future spinal cord3.23e-2852
neural keel3.23e-2852
regional part of forebrain1.01e-2639
forebrain1.01e-2639
future forebrain1.01e-2639
anterior neural tube8.16e-2640
pre-chordal neural plate1.40e-2549
brain grey matter7.23e-2529
regional part of telencephalon7.23e-2529
telencephalon7.23e-2529
ecto-epithelium1.77e-2473
brain5.40e-2447
future brain5.40e-2447
regional part of brain5.98e-2346
cerebral cortex2.35e-1721
cerebral hemisphere2.35e-1721
pallium2.35e-1721
structure with developmental contribution from neural crest7.43e-1792
regional part of cerebral cortex2.35e-1217
basal ganglion1.30e-088
nuclear complex of neuraxis1.30e-088
aggregate regional part of brain1.30e-088
collection of basal ganglia1.30e-088
cerebral subcortex1.30e-088
corpus striatum1.55e-085
striatum1.55e-085
ventral part of telencephalon1.55e-085
future corpus striatum1.55e-085
occipital lobe6.72e-0810
visual cortex6.72e-0810
neocortex6.72e-0810
regional part of spinal cord8.89e-085
gray matter of spinal cord8.89e-085
tube3.68e-07114
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