FFCP PHASE1:Mm9::chr8:108461916..108461942,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr8:108461916..108461942,- to FFCP PHASE1:Mm9::chr8:108461916..108461942,-: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=19171 | |EntrezGene=19171 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=51 | |||
|TSSclassifier=NA | |||
|UniProt=O35955 | |UniProt=O35955 | ||
|association_with_transcript=349bp_to_ENSMUST00000034369,NM_013640,uc009nep.2_5end | |||
|cluster_id=chr8:108461916..108461942,- | |||
|description=CAGE_peak_2_at_Psmb10_5end | |||
|id=chr8:108461916..108461942,- | |||
|ontology_enrichment_celltype=CL:0000144!2.01e-09!121;CL:0000012!2.01e-09!121;CL:0000548!2.56e-09!115;CL:0000004!2.56e-09!115;CL:0000255!2.56e-09!115;CL:0002371!6.76e-09!118;CL:0000723!6.90e-08!91;CL:0000048!6.90e-08!91;CL:0000219!1.58e-07!54;CL:0000034!3.91e-07!97 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,7.15e-09,54;CL:0000723,2.72e-07,91;CL:0000048,2.72e-07,91;CL:0002320,5.96e-07,46;CL:0000134,5.96e-07,46;CL:0000034,7.22e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.39e-12!48;UBERON:0002390!1.98e-11!45;UBERON:0003061!1.98e-11!45;UBERON:0000064!5.31e-11!99;UBERON:0002370!5.44e-08!23;UBERON:0000974!5.44e-08!23;UBERON:0004807!5.44e-08!23;UBERON:0005058!5.44e-08!23;UBERON:0003351!5.44e-08!23;UBERON:0009113!5.44e-08!23;UBERON:0003295!5.44e-08!23;UBERON:0009722!5.44e-08!23;UBERON:0005562!5.44e-08!23;UBERON:0007690!5.44e-08!23;UBERON:0004177!8.41e-08!29;UBERON:0003408!1.22e-07!24;UBERON:0002405!1.24e-07!70;UBERON:0006562!3.15e-07!24;UBERON:0001557!3.15e-07!24;UBERON:0001042!3.15e-07!24;UBERON:0008814!3.15e-07!24;UBERON:0009145!3.15e-07!24;UBERON:0007811!3.57e-07!86;UBERON:0002020!9.16e-07!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.57e-14,48;UBERON:0002405,1.57e-14,48;UBERON:0002390,2.42e-13,45;UBERON:0003061,2.42e-13,45;UBERON:0002370,8.12e-10,23;UBERON:0000974,8.12e-10,23;UBERON:0004807,8.12e-10,23;UBERON:0005058,8.12e-10,23;UBERON:0003351,8.12e-10,23;UBERON:0009113,8.12e-10,23;UBERON:0003295,8.12e-10,23;UBERON:0009722,8.12e-10,23;UBERON:0005562,8.12e-10,23;UBERON:0007690,8.12e-10,23;UBERON:0006562,4.32e-09,24;UBERON:0003408,4.32e-09,24;UBERON:0001557,4.32e-09,24;UBERON:0001042,4.32e-09,24;UBERON:0008814,4.32e-09,24;UBERON:0009145,4.32e-09,24;UBERON:0004177,2.00e-08,29;UBERON:0005057,2.00e-08,29;UBERON:0002021,4.84e-08,10;UBERON:0000411,4.84e-08,10;UBERON:0001950,4.84e-08,10;UBERON:0000072,2.84e-07,27;UBERON:0002020,4.50e-07,34;UBERON:0002384,5.96e-07,46 | |||
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|phase1_expression=1.12104192973356,3.48975407639361,3.63999391511629,0.90739263392049,0.500895729946347,1.17515490338323,2.33612640595526,3.22808308603941,5.20918271961167,5.38348410540585,0.513653904676515,0.8774937489487,0.856003649656029,1.66098764596095,0.999329285446988,0.202475267389826,0,3.3123527362615,1.7824876368746,2.54633791078818,1.36069264241712,2.08510997521859,1.04479915655574,2.23989391910769,1.83527424853736,5.16808767703518,3.4460959692726,7.32602191132023,1.71021077510736,6.04872311423834,8.42575940490158,1.90509202037889,0,0,1.1554064790051,0.831173226792462,0.612508068787107,0,1.5626706890476,0.523523743973798,0,0.683045484958446,0,3.77690453926732,2.73717714292689,1.28482726513177,7.04152209913235,2.39827672018491,3.51497892375155,2.3331587888914,3.77963338388479,5.75010257459886,1.8456086666351,2.17608642603403,2.01656279485478,1.28629718017973,1.43266719969378,0.515672092277442,2.22548106945558,1.5869729378161,0.633831403506179,3.04960078862219,2.66788438833342,5.39939830368839,10.8775299882367,3.5524005747305,2.09720077362883,3.07374644257244,0.518448061542388,0.810035629990144,0.210324961351382,3.71346279724945,5.52171352379034,0.979926393719632,0.575072826109418,0,5.50579404996943,0.638436690425939,1.22885226604995,1.84640802822271,3.01909223887952,1.56274011167028,0.837548997004143,3.93933827022176,0.916789486660861,1.47314292736834,3.27454865837937,2.60959224155421,0.530083353332288,0.377857800533928,1.73918693221007,0,2.03991400112325,0.539703191637817,0,0.896053774194671,0.842666520790511,1.1930122580464,0.779358013808606,1.06001872353102,0.985903938436763,1.28326477414318,0,0,0.216491041011214,0.506719730950197,0.505524445014783,1.37020655662872,2.58937883647172,0.890652834388949,1.38788261412909,0.608930956624282,0,0.60289056221049,0.352766121407114,0.628332956648377,0.494389935468748,0.578397427679647,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0.292780797011547,0.209446706813455,1.78819938646014,2.87556298814209,1.19980546198682,4.19331749341113,0.898743836428936,1.83000241127451,0.251308704225729,2.78118912307642,3.3243009452943,2.28566849015516,0.486723789203273,0.407357455401265,0.497627882440372,0.252722758433675,0.210441855886474,0.520481771850815,0.689706313300419,0.360124259610698,0.452114453507145,0.340182495756639,0.640568601424249,0.374806898238915,0.517406741478031,0.215567992932842,0.189106080167819,0.703804496655795,0.219195732427575,0.278047249225598,0.348252166522167,0.205782136407943,0.199034266818493,2.80885274925294,2.31613116403244,2.84163499395593,0.828503090142008,0,1.08037236876609,0.473489471170421,1.77087808572663,0.308534225774757,0.465067889500816,0,0.116765342367169,0.16455984991348,0,0.162137619091711,0.292399974850665,2.19550115291051,0.805238512562231,1.26173969138476,0.514523061896422,2.31293148088659,0.264450566663544,0.853153002140936,0.232236671860439,0.128867461322093,0,0,0.951128130562796,0.474529061544512,0.823494773620054,1.00534083520108,1.39269530428806,1.36474860983384,0.898819408654221,0.648414149624083,1.39398891278057,0,0.571242563048644,2.25415471346161,0.203651327845314,0.387904974335251,0.210407459670956,0.632365371242573,0.295220295959204,0.156998727841375,0.493588655687202,2.66807364378434,0.333690211432188,0.786235980452812,0.449724224769707,0,0.241177159752417,1.2731292589071,0.287696137450811,0.648540907100142,1.09824565275233,0,3.34926852901653,1.87222603868736,0.252578877947112,0.717589654087649,0,1.47802552133284,1.13694847062291,0.162964976442026,0,0.469380496577004,1.17254380209271,0.476087281772027,0.780534591431195,0.788175720530955,1.32878813789265,0.797273843287435,2.29408640602033,1.20879487306127,0.723245292907558,12.0633027151418,42.4246433378593,0,0.275936746304732,0.80275294993896,1.05490517932983,0.327869890753351,0,0.315508219416257,0.780877488593277,0.861693590931196,1.19484398976276,1.33679204449436,0.849229592366497,0,0.584511715822624,1.18586333383957,0.963963949265421,0.851640511249612,0.35613120733451,0.651547837414304,0.989820737835213,0,0.485561272309963,0.302323556964751,0.188605079755898,0.590603785761546,0.307435147943927,1.55056975900933,0,0,0.632073515871632,0,0,1.02131881726136,0.720244376125241,0.129358683782755,0,0.532020700926821,0.178368817602071,0.493647061806363,1.8267896946876,0.469343416127421,0.42366414172764,0,0.8244312647074,0,0,0.119372344003136,0.656563598980245,1.7488850197791,1.48340241608408,2.05045056957423,0.82554747185289,0.740778109478847,1.13021074202815,1.36694227721025,0.686334519619568,0.849892149969277,2.23922323717853,1.79659965945751,0,0.474503990371703,0.203319467126849,0.108005340821801,0.418176592028937,0.655087691238533,0.269728692769641,0.826534557253359,0.785267825952089,0.777689839750757,0.621339313086926,0,0.149516546043979,0.496375471371293,0,1.16243841129958,0.337912250981556,0.234714477291508,0.781226309063701,0.943734099831398,0,0.288030006257865,14.8525226695244,48.4513264543492,80.4226794600597,72.1060567526762,36.5214459161662,27.41802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| ||
|short_description=p2@Psmb10 | |||
}} | }} |
Latest revision as of 07:52, 27 September 2015
Short description: | p2@Psmb10 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Psmb10_5end |
Coexpression cluster: | MCL_coexpression_mm9:51 |
Association with transcript: | 349bp_to_ENSMUST00000034369, NM_013640, uc009nep.2_5end |
EntrezGene: | Psmb10 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 7.15e-09 | 54 |
somatic stem cell | 2.72e-07 | 91 |
multi fate stem cell | 2.72e-07 | 91 |
connective tissue cell | 5.96e-07 | 46 |
mesenchymal cell | 5.96e-07 | 46 |
stem cell | 7.22e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.57e-14 | 48 |
immune system | 1.57e-14 | 48 |
hematopoietic system | 2.42e-13 | 45 |
blood island | 2.42e-13 | 45 |
thymus | 8.12e-10 | 23 |
neck | 8.12e-10 | 23 |
respiratory system epithelium | 8.12e-10 | 23 |
hemolymphoid system gland | 8.12e-10 | 23 |
pharyngeal epithelium | 8.12e-10 | 23 |
thymic region | 8.12e-10 | 23 |
pharyngeal gland | 8.12e-10 | 23 |
entire pharyngeal arch endoderm | 8.12e-10 | 23 |
thymus primordium | 8.12e-10 | 23 |
early pharyngeal endoderm | 8.12e-10 | 23 |
pharynx | 4.32e-09 | 24 |
gland of gut | 4.32e-09 | 24 |
upper respiratory tract | 4.32e-09 | 24 |
chordate pharynx | 4.32e-09 | 24 |
pharyngeal arch system | 4.32e-09 | 24 |
pharyngeal region of foregut | 4.32e-09 | 24 |
hemopoietic organ | 2.00e-08 | 29 |
immune organ | 2.00e-08 | 29 |
occipital lobe | 4.84e-08 | 10 |
visual cortex | 4.84e-08 | 10 |
neocortex | 4.84e-08 | 10 |
segment of respiratory tract | 2.84e-07 | 27 |
gray matter | 4.50e-07 | 34 |
connective tissue | 5.96e-07 | 46 |