FFCP PHASE1:Mm9::chr7:36234054..36234069,+: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr7:36234054..36234069,+ to FFCP PHASE1:Mm9::chr7:36234054..36234069,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=30962 | |EntrezGene=30962 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=Q9QXA6 | |UniProt=Q9QXA6 | ||
|association_with_transcript=0bp_to_ENSMUST00000118383,ENSMUST00000118969_5end | |||
|cluster_id=chr7:36234054..36234069,+ | |||
|description=CAGE_peak_4_at_Slc7a9_5end | |||
|id=chr7:36234054..36234069,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.82e-09!9;CL:0002251!1.82e-09!9;CL:0000239!2.70e-07!6;CL:0000677!2.70e-07!6;CL:0000212!2.70e-07!6;CL:0000584!2.70e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.24e-16,9;CL:0002251,2.24e-16,9;CL:0000239,2.57e-12,6;CL:0000677,2.57e-12,6;CL:0000584,2.57e-12,6;CL:0000075,1.98e-10,7;CL:0002076,4.37e-09,15;CL:0000066,4.37e-09,25;CL:0000682,3.24e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.09e-17!43;UBERON:0000344!2.56e-15!15;UBERON:0005409!6.21e-14!59;UBERON:0001242!2.24e-13!13;UBERON:0000060!2.24e-13!13;UBERON:0001262!2.24e-13!13;UBERON:0004786!2.24e-13!13;UBERON:0004923!1.57e-11!24;UBERON:0003350!1.82e-09!9;UBERON:0004808!1.82e-09!9;UBERON:0001277!1.82e-09!9;UBERON:0000485!3.17e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.46e-45,31;UBERON:0000344,2.26e-27,15;UBERON:0005409,2.36e-27,47;UBERON:0001242,1.02e-23,13;UBERON:0001262,1.02e-23,13;UBERON:0004786,1.02e-23,13;UBERON:0004923,2.28e-20,24;UBERON:0003350,2.24e-16,9;UBERON:0004808,2.24e-16,9;UBERON:0001277,2.24e-16,9;UBERON:0000485,4.67e-13,11;UBERON:0004119,1.48e-10,118;UBERON:0000925,1.48e-10,118;UBERON:0006595,1.48e-10,118;UBERON:0001007,4.71e-10,116;UBERON:0001555,4.71e-10,116;UBERON:0007026,4.71e-10,116;UBERON:0002108,1.55e-08,4;UBERON:0004921,1.61e-08,114;UBERON:0000331,9.28e-07,3;UBERON:0002116,9.28e-07,3;UBERON:0001204,9.28e-07,3;UBERON:0001168,9.28e-07,3 | |||
|phase1_expression=0,12.9120900826564,11.3749809847384,16.030603199262,8.01433167914156,3.3575854382378,3.50418960893289,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,7.35965144849671,8.94696196161963,10.3361753540704,15.0766698655676,6.89507944594845,9.88121781173144,7.56090389279792,5.54326276638262,0,0,0,1.44425809875637,1.82858109894342,1.83752420636132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,0,0,0,3.4255163915718,0,0,0,0,0.230615497256059,0,0,0,11.3709685157812,0,0,0,0,0,0,0,0,10.2182822083437,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.5209391491899,8.46241813323342,0,0.232236671860439,1.80414445850931,5.64713868945359,7.11609740303585,8.56015317506516,6.64340686162316,7.41145296258049,8.54539709920916,9.94782360205754,7.60359939764569,4.49409704327111,6.70027954611552,7.56736838366595,0,0.456994050438915,1.1270773567308,1.22190796707189,0.969762435838129,0.911765658574141,2.90888070771584,3.98547399544926,5.18095801876537,4.07210640941942,0,0.667380422864376,0.393117990226406,0.224862112384854,1.21716072833102,1.20588579876208,0.763877555344259,0,0.162135226775035,0.549122826376163,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0.302323556964751,0,0,0,2.84271122485043,0,0,0,0,0,0,0,0,0,0,0,0,0,0.938686832254841,1.0591603543191,0,0,0,0,0,0,7.86998258900597,0,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0.432021363287205,0,0.436725127492355,0,0.247960367176008,0,0.129614973291793,0,0,0,0,0,0.129159823477731,0,0.234714477291508,0,0.104859344425711,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0.419226325255965,0,0.44449345560323,0.412070114477788,0.320919209591815,0.252697211763798,0,0.377252682772152,0.37456602987953,0.384150914429216,0.459483751644906,0.952587382566147,0.463537303779422,0.192909220463705,1.23625770240992,0.294397840268795,0.342869252385415,0.177475806159338,0.238436189947321,0.436039249896986,0.0941093804153306,0.0846146078916765,0.914639864363863,0.263069711437843,0.135804113845862,0,0.830445126869219,0.394017929502254,1.22769312950907,0.619747364743864,0.192906610981141,0,0.467863216890817,0.644613162144895,0,0,0 | |phase1_expression=0,12.9120900826564,11.3749809847384,16.030603199262,8.01433167914156,3.3575854382378,3.50418960893289,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,7.35965144849671,8.94696196161963,10.3361753540704,15.0766698655676,6.89507944594845,9.88121781173144,7.56090389279792,5.54326276638262,0,0,0,1.44425809875637,1.82858109894342,1.83752420636132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,0,0,0,3.4255163915718,0,0,0,0,0.230615497256059,0,0,0,11.3709685157812,0,0,0,0,0,0,0,0,10.2182822083437,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.5209391491899,8.46241813323342,0,0.232236671860439,1.80414445850931,5.64713868945359,7.11609740303585,8.56015317506516,6.64340686162316,7.41145296258049,8.54539709920916,9.94782360205754,7.60359939764569,4.49409704327111,6.70027954611552,7.56736838366595,0,0.456994050438915,1.1270773567308,1.22190796707189,0.969762435838129,0.911765658574141,2.90888070771584,3.98547399544926,5.18095801876537,4.07210640941942,0,0.667380422864376,0.393117990226406,0.224862112384854,1.21716072833102,1.20588579876208,0.763877555344259,0,0.162135226775035,0.549122826376163,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0.302323556964751,0,0,0,2.84271122485043,0,0,0,0,0,0,0,0,0,0,0,0,0,0.938686832254841,1.0591603543191,0,0,0,0,0,0,7.86998258900597,0,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0.432021363287205,0,0.436725127492355,0,0.247960367176008,0,0.129614973291793,0,0,0,0,0,0.129159823477731,0,0.234714477291508,0,0.104859344425711,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0.419226325255965,0,0.44449345560323,0.412070114477788,0.320919209591815,0.252697211763798,0,0.377252682772152,0.37456602987953,0.384150914429216,0.459483751644906,0.952587382566147,0.463537303779422,0.192909220463705,1.23625770240992,0.294397840268795,0.342869252385415,0.177475806159338,0.238436189947321,0.436039249896986,0.0941093804153306,0.0846146078916765,0.914639864363863,0.263069711437843,0.135804113845862,0,0.830445126869219,0.394017929502254,1.22769312950907,0.619747364743864,0.192906610981141,0,0.467863216890817,0.644613162144895,0,0,0 | ||
|short_description=p4@Slc7a9 | |||
}} | }} |
Latest revision as of 16:48, 26 September 2015
Short description: | p4@Slc7a9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Slc7a9_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_ENSMUST00000118383, ENSMUST00000118969_5end |
EntrezGene: | Slc7a9 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.24e-16 | 9 |
epithelial cell of alimentary canal | 2.24e-16 | 9 |
brush border epithelial cell | 2.57e-12 | 6 |
gut absorptive cell | 2.57e-12 | 6 |
enterocyte | 2.57e-12 | 6 |
columnar/cuboidal epithelial cell | 1.98e-10 | 7 |
endo-epithelial cell | 4.37e-09 | 15 |
epithelial cell | 4.37e-09 | 25 |
M cell of gut | 3.24e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.46e-45 | 31 |
mucosa | 2.26e-27 | 15 |
gastrointestinal system | 2.36e-27 | 47 |
intestinal mucosa | 1.02e-23 | 13 |
wall of intestine | 1.02e-23 | 13 |
gastrointestinal system mucosa | 1.02e-23 | 13 |
organ component layer | 2.28e-20 | 24 |
epithelium of mucosa | 2.24e-16 | 9 |
gastrointestinal system epithelium | 2.24e-16 | 9 |
intestinal epithelium | 2.24e-16 | 9 |
simple columnar epithelium | 4.67e-13 | 11 |
endoderm-derived structure | 1.48e-10 | 118 |
endoderm | 1.48e-10 | 118 |
presumptive endoderm | 1.48e-10 | 118 |
digestive system | 4.71e-10 | 116 |
digestive tract | 4.71e-10 | 116 |
primitive gut | 4.71e-10 | 116 |
small intestine | 1.55e-08 | 4 |
subdivision of digestive tract | 1.61e-08 | 114 |
ileal mucosa | 9.28e-07 | 3 |
ileum | 9.28e-07 | 3 |
mucosa of small intestine | 9.28e-07 | 3 |
wall of small intestine | 9.28e-07 | 3 |