FFCP PHASE1:Mm9::chr7:148106795..148106810,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=101613 | |EntrezGene=101613 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=E9QNS0,Q91WS2 | |UniProt=E9QNS0,Q91WS2 | ||
|association_with_transcript=0bp_to_ENSMUST00000106045,NM_001081389,uc009kiu.1,uc009kiv.2_5end | |||
|cluster_id=chr7:148106795..148106810,+ | |||
|description=CAGE_peak_1_at_Nlrp6_5end | |||
|id=chr7:148106795..148106810,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.01e-10!9;CL:0002251!1.01e-10!9;CL:0000239!1.36e-07!6;CL:0000677!1.36e-07!6;CL:0000212!1.36e-07!6;CL:0000584!1.36e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,7.99e-13,9;CL:0002251,7.99e-13,9;CL:0000239,5.54e-09,6;CL:0000677,5.54e-09,6;CL:0000584,5.54e-09,6;CL:0000075,1.57e-07,7;CL:0002076,9.50e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.55e-20!59;UBERON:0000160!1.57e-20!43;UBERON:0000344!5.14e-17!15;UBERON:0001242!4.98e-15!13;UBERON:0000060!4.98e-15!13;UBERON:0001262!4.98e-15!13;UBERON:0004786!4.98e-15!13;UBERON:0003350!1.01e-10!9;UBERON:0004808!1.01e-10!9;UBERON:0001277!1.01e-10!9;UBERON:0004923!1.25e-08!24;UBERON:0000485!2.94e-08!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.12e-35,31;UBERON:0005409,5.70e-27,47;UBERON:0000344,1.44e-20,15;UBERON:0001242,4.02e-18,13;UBERON:0001262,4.02e-18,13;UBERON:0004786,4.02e-18,13;UBERON:0003350,7.99e-13,9;UBERON:0004808,7.99e-13,9;UBERON:0001277,7.99e-13,9;UBERON:0004923,4.68e-11,24;UBERON:0000485,4.78e-10,11;UBERON:0001007,2.01e-07,116;UBERON:0001555,2.01e-07,116;UBERON:0007026,2.01e-07,116;UBERON:0004119,3.94e-07,118;UBERON:0000925,3.94e-07,118;UBERON:0006595,3.94e-07,118;UBERON:0002108,7.92e-07,4 | |||
|phase1_expression=0,54.7891389993797,42.3149292632269,173.311993078814,162.791112232563,25.1818907867835,23.127651418957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,50.2376207571297,38.7701685003517,36.7508457033613,37.4762936658395,39.2157643488318,97.6720376005762,94.2592685302141,16.4080577884925,0,0,0,60.6588401477677,62.5042266547931,58.1882665347752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.37066608316204,0,0,0,0,0,0,0,0,0,0,12.4460428893775,0,0,0.173485326766136,0,0.230615497256059,0,0,0.251333182659351,0,0,0,0,0,0,37.2783522436244,0,0,78.169858893829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,87.5609774907065,85.9464341656519,0,0,6.44337306610467,27.8323263980213,35.8028650590241,50.7902421720533,95.3803413704468,47.2686000057911,33.9302531880364,31.2361661104607,38.2129610753476,88.0843020481137,61.8154822641625,79.8556505750012,0,0,0,0,0.193952487167626,0.140271639780637,0,0,0,0,0,0,0,0.224862112384854,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0.164970122972535,0,0,0.302323556964751,0,0,0,16.0225541764297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,88.9016551721045,0,0,0,0,0,0,0,0.339956859987711,0.139951452323658,0,0.954670618015114,0,0.203319467126849,5.18425635944646,1.25452977608681,5.02233896616208,0.269728692769641,0.578574190077352,0,65.9740214055226,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02725215290164,1.02710957164827,0,0,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0.419226325255965,2.38996560985018,3.11145418922261,2.88449080134452,1.92551525755089,1.01078884705519,1.77435509923168,2.26351609663291,1.77918864192777,1.53660365771686,1.83793500657962,2.38146845641537,2.0859178670074,2.89363830695558,1.64834360321323,1.03039244094078,1.02860775715625,1.95223386775271,1.90748951957857,2.32554266611726,0.941093804153306,1.4384483341585,2.0122077016005,1.31534855718921,2.58027816307137,2.24456908663095,2.49133538060766,2.36410757701352,1.22769312950907,0.619747364743864,1.54325288784913,0,1.87145286756327,2.36358159453128,0,0,0 | |phase1_expression=0,54.7891389993797,42.3149292632269,173.311993078814,162.791112232563,25.1818907867835,23.127651418957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,50.2376207571297,38.7701685003517,36.7508457033613,37.4762936658395,39.2157643488318,97.6720376005762,94.2592685302141,16.4080577884925,0,0,0,60.6588401477677,62.5042266547931,58.1882665347752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.37066608316204,0,0,0,0,0,0,0,0,0,0,12.4460428893775,0,0,0.173485326766136,0,0.230615497256059,0,0,0.251333182659351,0,0,0,0,0,0,37.2783522436244,0,0,78.169858893829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,87.5609774907065,85.9464341656519,0,0,6.44337306610467,27.8323263980213,35.8028650590241,50.7902421720533,95.3803413704468,47.2686000057911,33.9302531880364,31.2361661104607,38.2129610753476,88.0843020481137,61.8154822641625,79.8556505750012,0,0,0,0,0.193952487167626,0.140271639780637,0,0,0,0,0,0,0,0.224862112384854,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0.164970122972535,0,0,0.302323556964751,0,0,0,16.0225541764297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,88.9016551721045,0,0,0,0,0,0,0,0.339956859987711,0.139951452323658,0,0.954670618015114,0,0.203319467126849,5.18425635944646,1.25452977608681,5.02233896616208,0.269728692769641,0.578574190077352,0,65.9740214055226,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02725215290164,1.02710957164827,0,0,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0.419226325255965,2.38996560985018,3.11145418922261,2.88449080134452,1.92551525755089,1.01078884705519,1.77435509923168,2.26351609663291,1.77918864192777,1.53660365771686,1.83793500657962,2.38146845641537,2.0859178670074,2.89363830695558,1.64834360321323,1.03039244094078,1.02860775715625,1.95223386775271,1.90748951957857,2.32554266611726,0.941093804153306,1.4384483341585,2.0122077016005,1.31534855718921,2.58027816307137,2.24456908663095,2.49133538060766,2.36410757701352,1.22769312950907,0.619747364743864,1.54325288784913,0,1.87145286756327,2.36358159453128,0,0,0 | ||
|short_description=p1@Nlrp6 | |||
}} | }} |
Latest revision as of 03:08, 26 September 2015
Short description: | p1@Nlrp6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Nlrp6_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_ENSMUST00000106045, NM_001081389, uc009kiu.1, uc009kiv.2_5end |
EntrezGene: | Nlrp6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 7.99e-13 | 9 |
epithelial cell of alimentary canal | 7.99e-13 | 9 |
brush border epithelial cell | 5.54e-09 | 6 |
gut absorptive cell | 5.54e-09 | 6 |
enterocyte | 5.54e-09 | 6 |
columnar/cuboidal epithelial cell | 1.57e-07 | 7 |
endo-epithelial cell | 9.50e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.12e-35 | 31 |
gastrointestinal system | 5.70e-27 | 47 |
mucosa | 1.44e-20 | 15 |
intestinal mucosa | 4.02e-18 | 13 |
wall of intestine | 4.02e-18 | 13 |
gastrointestinal system mucosa | 4.02e-18 | 13 |
epithelium of mucosa | 7.99e-13 | 9 |
gastrointestinal system epithelium | 7.99e-13 | 9 |
intestinal epithelium | 7.99e-13 | 9 |
organ component layer | 4.68e-11 | 24 |
simple columnar epithelium | 4.78e-10 | 11 |
digestive system | 2.01e-07 | 116 |
digestive tract | 2.01e-07 | 116 |
primitive gut | 2.01e-07 | 116 |
endoderm-derived structure | 3.94e-07 | 118 |
endoderm | 3.94e-07 | 118 |
presumptive endoderm | 3.94e-07 | 118 |
small intestine | 7.92e-07 | 4 |