FFCP PHASE1:Mm9::chr5:73948543..73948565,+: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr5:73948543..73948565,+ to FFCP PHASE1:Mm9::chr5:73948543..73948565,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=906 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:73948543..73948565,+ | |||
|description=CAGE_peak_at_chr5:73948543..73948565,+ | |||
|id=chr5:73948543..73948565,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.01e-08!9;CL:0002251!1.01e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.62e-11,9;CL:0002251,1.62e-11,9;CL:0002250,4.75e-10,3;CL:0000223,4.26e-08,20;CL:0000066,1.02e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!3.37e-14!15;UBERON:0001242!2.23e-12!13;UBERON:0000060!2.23e-12!13;UBERON:0001262!2.23e-12!13;UBERON:0004786!2.23e-12!13;UBERON:0001007!2.77e-11!128;UBERON:0001555!2.77e-11!128;UBERON:0007026!2.77e-11!128;UBERON:0004119!8.69e-11!130;UBERON:0000925!8.69e-11!130;UBERON:0006595!8.69e-11!130;UBERON:0005409!2.16e-10!59;UBERON:0004921!3.69e-10!126;UBERON:0004185!3.69e-10!126;UBERON:0000160!6.63e-09!43;UBERON:0003350!1.01e-08!9;UBERON:0004808!1.01e-08!9;UBERON:0001277!1.01e-08!9;UBERON:0004923!2.53e-08!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.95e-26,15;UBERON:0001242,2.41e-21,13;UBERON:0001262,2.41e-21,13;UBERON:0004786,2.41e-21,13;UBERON:0000160,4.28e-18,31;UBERON:0004923,1.55e-15,24;UBERON:0005409,3.64e-14,47;UBERON:0001007,1.56e-13,116;UBERON:0001555,1.56e-13,116;UBERON:0007026,1.56e-13,116;UBERON:0004119,3.32e-13,118;UBERON:0000925,3.32e-13,118;UBERON:0006595,3.32e-13,118;UBERON:0002108,1.51e-11,4;UBERON:0003350,1.62e-11,9;UBERON:0004808,1.62e-11,9;UBERON:0001277,1.62e-11,9;UBERON:0004921,2.52e-11,114;UBERON:0000331,2.29e-09,3;UBERON:0002116,2.29e-09,3;UBERON:0001204,2.29e-09,3;UBERON:0001168,2.29e-09,3;UBERON:0000485,2.74e-09,11;UBERON:0002465,7.62e-09,3;UBERON:0001962,7.62e-07,2;UBERON:0001961,7.62e-07,2;UBERON:0001744,7.62e-07,2 | |||
|phase1_expression=0,1.74487703819681,0.454999239389536,5.74682001482977,3.00537437967808,0.839396359559449,0.934450562382103,2.1950964985068,0,0,0,0,0,0.0874204024189974,0,0,0,0.473193248037357,0.137114433605739,0,0.510259740906419,0,0,5.43974237497583,3.21172993494038,1.14846392823004,0.86152399231815,0.430942465371778,9.12112413390595,10.837295579677,1.55211357458713,0,0,0,13.5760261283099,9.64160943079256,11.2293145944303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0.255374676170375,0.153606533256243,0,0.0914876436024097,0,0,0,0.15279824777681,0,0,0,0,0,2.6087803983151,1.72084775396277,0,0,1.29955283489534,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0,1.59857431606684,1.03575153458869,0,0,0,0,0,0,0.251333182659351,0,0.433798070759735,0,0,0.220841518460394,0.969750506270444,0,0,0,10.4737392635522,0,0,0,0.149790639404823,0,0,0,0.255715457330331,0.20778804455956,0,0,0,0,0,0,0,0,0,0,0.2562274405697,0,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0.233530684734339,0,0,0,0,0.219550115291051,0.134206418760372,0,0,14.5384264512871,0,0,0.232236671860439,0.128867461322093,0,0,0.951128130562796,0.949058123089023,0.164698954724011,0.251335208800269,0.795825888164603,1.36474860983384,0.898819408654221,4.32276099749388,3.98282546508734,0,0,0,0.203651327845314,0,0.0701358198903186,0,0,0,0.246794327843601,0.296452627087149,0,0,0,0,0,0,0,0.162135226775035,0.274561413188081,1.43768206527355,1.11642284300551,0.312037673114561,0.252578877947112,0,0.482443521363367,2.03228509183265,0,0,0,0.469380496577004,0.167506257441816,0.476087281772027,1.17080188714679,0,0.44292937929755,0.159454768657487,1.80249646187312,0.518054945597687,1.73578870297814,0,0,0.491764273019036,0.275936746304732,0,0.117211686592203,0,0,0.315508219416257,0,0,0,0,0,0,0,0.395287777946524,0,0.283880170416537,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0.220528398054962,0.32977250588296,0.484393280087717,0,0,0.656563598980245,1.45740418314925,0,0.341741761595705,0,0,0,0.136694227721025,0,0,0,0,1.90934123603023,0,0.203319467126849,0.108005340821801,0.627264888043406,0.218362563746178,0,0.661227645802687,0.26175594198403,1.68499465279331,0,0.56369293868419,0.149516546043979,0,0,0,0,0.117357238645754,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0.116876902181569,0.453460767230423,0,0,0,0.772758376128762,0.750729901804728,1.46521299413812,0,0,0,0,0,0,0.685082519770642,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0.187283014939765,0.0640251524048693,0,0,0.231768651889711,0,0,0,0.342869252385415,0,0.238436189947321,0.145346416632329,0.188218760830661,0.0846146078916765,0,0.263069711437843,0,0,0,0,0,0.154936841185966,0.192906610981141,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,1.74487703819681,0.454999239389536,5.74682001482977,3.00537437967808,0.839396359559449,0.934450562382103,2.1950964985068,0,0,0,0,0,0.0874204024189974,0,0,0,0.473193248037357,0.137114433605739,0,0.510259740906419,0,0,5.43974237497583,3.21172993494038,1.14846392823004,0.86152399231815,0.430942465371778,9.12112413390595,10.837295579677,1.55211357458713,0,0,0,13.5760261283099,9.64160943079256,11.2293145944303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0.255374676170375,0.153606533256243,0,0.0914876436024097,0,0,0,0.15279824777681,0,0,0,0,0,2.6087803983151,1.72084775396277,0,0,1.29955283489534,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0,1.59857431606684,1.03575153458869,0,0,0,0,0,0,0.251333182659351,0,0.433798070759735,0,0,0.220841518460394,0.969750506270444,0,0,0,10.4737392635522,0,0,0,0.149790639404823,0,0,0,0.255715457330331,0.20778804455956,0,0,0,0,0,0,0,0,0,0,0.2562274405697,0,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0.233530684734339,0,0,0,0,0.219550115291051,0.134206418760372,0,0,14.5384264512871,0,0,0.232236671860439,0.128867461322093,0,0,0.951128130562796,0.949058123089023,0.164698954724011,0.251335208800269,0.795825888164603,1.36474860983384,0.898819408654221,4.32276099749388,3.98282546508734,0,0,0,0.203651327845314,0,0.0701358198903186,0,0,0,0.246794327843601,0.296452627087149,0,0,0,0,0,0,0,0.162135226775035,0.274561413188081,1.43768206527355,1.11642284300551,0.312037673114561,0.252578877947112,0,0.482443521363367,2.03228509183265,0,0,0,0.469380496577004,0.167506257441816,0.476087281772027,1.17080188714679,0,0.44292937929755,0.159454768657487,1.80249646187312,0.518054945597687,1.73578870297814,0,0,0.491764273019036,0.275936746304732,0,0.117211686592203,0,0,0.315508219416257,0,0,0,0,0,0,0,0.395287777946524,0,0.283880170416537,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0.220528398054962,0.32977250588296,0.484393280087717,0,0,0.656563598980245,1.45740418314925,0,0.341741761595705,0,0,0,0.136694227721025,0,0,0,0,1.90934123603023,0,0.203319467126849,0.108005340821801,0.627264888043406,0.218362563746178,0,0.661227645802687,0.26175594198403,1.68499465279331,0,0.56369293868419,0.149516546043979,0,0,0,0,0.117357238645754,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0.116876902181569,0.453460767230423,0,0,0,0.772758376128762,0.750729901804728,1.46521299413812,0,0,0,0,0,0,0.685082519770642,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0.187283014939765,0.0640251524048693,0,0,0.231768651889711,0,0,0,0.342869252385415,0,0.238436189947321,0.145346416632329,0.188218760830661,0.0846146078916765,0,0.263069711437843,0,0,0,0,0,0.154936841185966,0.192906610981141,0,0,0.214871054048298,0,0,0 | ||
|short_description=p@chr5:73948543..73948565,+ | |||
}} | }} |
Latest revision as of 14:31, 4 August 2015
Short description: | p@chr5:73948543..73948565, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:73948543..73948565, + |
Coexpression cluster: | MCL_coexpression_mm9:906 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.62e-11 | 9 |
epithelial cell of alimentary canal | 1.62e-11 | 9 |
intestinal crypt stem cell | 4.75e-10 | 3 |
endodermal cell | 4.26e-08 | 20 |
epithelial cell | 1.02e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.95e-26 | 15 |
intestinal mucosa | 2.41e-21 | 13 |
wall of intestine | 2.41e-21 | 13 |
gastrointestinal system mucosa | 2.41e-21 | 13 |
intestine | 4.28e-18 | 31 |
organ component layer | 1.55e-15 | 24 |
gastrointestinal system | 3.64e-14 | 47 |
digestive system | 1.56e-13 | 116 |
digestive tract | 1.56e-13 | 116 |
primitive gut | 1.56e-13 | 116 |
endoderm-derived structure | 3.32e-13 | 118 |
endoderm | 3.32e-13 | 118 |
presumptive endoderm | 3.32e-13 | 118 |
small intestine | 1.51e-11 | 4 |
epithelium of mucosa | 1.62e-11 | 9 |
gastrointestinal system epithelium | 1.62e-11 | 9 |
intestinal epithelium | 1.62e-11 | 9 |
subdivision of digestive tract | 2.52e-11 | 114 |
ileal mucosa | 2.29e-09 | 3 |
ileum | 2.29e-09 | 3 |
mucosa of small intestine | 2.29e-09 | 3 |
wall of small intestine | 2.29e-09 | 3 |
simple columnar epithelium | 2.74e-09 | 11 |
lymphoid system | 7.62e-09 | 3 |
gut-associated lymphoid tissue | 7.62e-07 | 2 |
mucosa-associated lymphoid tissue | 7.62e-07 | 2 |
lymphoid tissue | 7.62e-07 | 2 |